The DOI matches its Crossref record; 3 of the 3 references it cites were found in a registry or an index.
Comprehensive Analysis of NAC Family Genes in Oryza sativa and Arabidopsis thaliana
Open accessAbstract
The NAC domain was originally characterized from consensus sequences from petunia NAM and from Arabidopsis ATAF1, ATAF2, and CUC2. Genes containing the NAC domain (NAC family genes) are plant-specific transcriptional regulators and are expressed in various developmental stages and tissues. We performed a comprehensive analysis of NAC family genes in Oryza sativa (a monocot) and Arabidopsis thaliana (a dicot). We found 75 predicted NAC proteins in full-length cDNA data sets of O. sativa (28,469 clones) and 105 in putative genes (28,581 sequences) from the A. thaliana genome. NAC domains from both predicted and known NAC family proteins were classified into two groups and 18 subgroups by sequence similarity. There were a few differences in amino acid sequences in the NAC domains between O. sativa and A. thaliana. In addition, we found 13 common sequence motifs from transcriptional activation regions in the C-terminal regions of predicted NAC proteins. These motifs probably diverged having correlations with NAC domain structures. We discuss the relationship between the structure and function of the NAC family proteins in light of our results and the published data. Our results will aid further functional analysis of NAC family genes.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
Initiative, T. A. G. (2000) · Nature · doi:10.1038/35048692 · Cited by 9,301
Genes involved in organ separation in Arabidopsis: an analysis of the cup-shaped cotyledon mutant.
Aida, M., Ishida, T., Fukaki, H., Fujisawa, H., & Tasaka, M. (1997) · The Plant Cell · doi:10.1105/tpc.9.6.841 · Cited by 1,486
Souer, E., van Houwelingen, A., Kloos, D., Mol, J., & Koes, R. (1996) · Cell · doi:10.1016/s0092-8674(00)81093-4 · Cited by 1,059
Cited by
PlnTFDB: updated content and new features of the plant transcription factor database
Pérez-Rodríguez, P., Riaño-Pachón, D. M., Corrêa, L. G. G., Rensing, S. A., Kersten, B., & Mueller-Roeber, B. (2010) · Nucleic Acids Research · doi:10.1093/nar/gkp805 · Cited by 734
Wu, A., Allu, A. D., Garapati, P., Siddiqui, H., Dortay, H., Zanor, M.-I., Asensi-Fabado, M. A., Munné-Bosch, S., Antonio, C., Tohge, T., et al. (2012) · The Plant Cell · doi:10.1105/tpc.111.090894 · Cited by 601
NAC-MYB-based transcriptional regulation of secondary cell wall biosynthesis in land plants
Nakano, Y., Yamaguchi, M., Endo, H., Rejab, N. A., & Ohtani, M. (2015) · Frontiers in Plant Science · doi:10.3389/fpls.2015.00288 · Cited by 527
De Clercq, I., Vermeirssen, V., Van Aken, O., Vandepoele, K., Murcha, M. W., Law, S. R., Inzé, A., Ng, S., Ivanova, A., Rombaut, D., et al. (2013) · The Plant Cell · doi:10.1105/tpc.113.117168 · Cited by 373
The Xylem and Phloem Transcriptomes from Secondary Tissues of the Arabidopsis Root-Hypocotyl
Zhao, C., Craig, J. C., Petzold, H. E., Dickerman, A. W., & Beers, E. P. (2005) · Plant Physiology · doi:10.1104/pp.105.060202 · Cited by 262
Metadata
- Authors
- Ooka, H.
- Venue
- DNA Research
- Publisher
- Oxford University Press (OUP)
- Published
- 2003-01-01
- Volume
- 10
- Issue
- 6
- Pages
- 239-247
- ISSN
- 1340-2838 (ISSN-L)
- OpenAlex
- W2130163276
- Cited by
- 1,165
- References
- 3
- FWCI
- 14.91
- Type
- journal article
- Language
- en
- Open access
- gold
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
How to cite
Cite CoChat for the checks on this page, and the paper for its own findings.
- This page
- CoChat. (2026). Citation check: Comprehensive Analysis of NAC Family Genes in Oryza sativa and Arabidopsis thaliana. https://app.cochat.ai/papers/10.1093/dnares/10.6.239
- The paper
- Ooka, H. (2003). Comprehensive Analysis of NAC Family Genes in Oryza sativa and Arabidopsis thaliana. DNA Research. https://doi.org/10.1093/dnares/10.6.239
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.
