Genome-wide association studies identify PRKCB as a novel genetic susceptibility locus for primary biliary cholangitis in the Japanese population
Open accessAbstract
A previous genome-wide association study (GWAS) performed in 963 Japanese individuals (487 primary biliary cholangitis [PBC] cases and 476 healthy controls) identified TNFSF15 (rs4979462) and POU2AF1 (rs4938534) as strong susceptibility loci for PBC. In this study, we performed GWAS in additional 1,923 Japanese individuals (894 PBC cases and 1,029 healthy controls), and combined the results with the previous data. This GWAS, together with a subsequent replication study in an independent set of 7,024 Japanese individuals (512 PBC cases and 6,512 healthy controls), identified PRKCB (rs7404928) as a novel susceptibility locus for PBC (odds ratio [OR] = 1.26, P = 4.13 × 10-9). Furthermore, a primary functional variant of PRKCB (rs35015313) was identified by genotype imputation using a phased panel of 1,070 Japanese individuals from a prospective, general population cohort study and subsequent in vitro functional analyses. These results may lead to improved understanding of the disease pathways involved in PBC, forming a basis for prevention of PBC and development of novel therapeutics.
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Non-HLA risk alleles in primary biliary cholangitis exhibit differences geographically and ethnically.
“Non-HLA risk alleles in primary biliary cholangitis also exhibit differences geographically and ethnically: IL-12A and IL-12RB2 in Canadian and North American patients; CCL20 and IL-12B in European patients; TNFSF15, POU2AF1, and PRKCB in Japanese patients; and IL-21, IL-21R, STAT4, CD28/ CTLA4/ICOS, CD58, ARID3A, and IL16 in Chinese patients.[13][14][15][16][17]”
From Primary biliary cholangitis. (2024) · cites this paper as [15]
Cites
Fast gapped-read alignment with Bowtie 2
Langmead, B., & Salzberg, S. L. (2012) · Nature Methods · doi:10.1038/nmeth.1923 · Cited by 56,400 · see citing works
LD Score regression distinguishes confounding from polygenicity in genome-wide association studies
Schizophrenia Working Group of the Psychiatric Genomics Consortium, Bulik-Sullivan, B. K., Loh, P.-R., Finucane, H. K., Ripke, S., Yang, J., Patterson, N., Daly, M. J., Price, A. L., & Neale, B. M. (2015) · Nature Genetics · doi:10.1038/ng.3211 · Cited by 5,559 · see citing works
Howie, B. N., Donnelly, P., & Marchini, J. (2009) · PLoS Genetics · doi:10.1371/journal.pgen.1000529 · Cited by 3,928 · see citing works
Mapping short DNA sequencing reads and calling variants using mapping quality scores
Li, H., Ruan, J., & Durbin, R. (2008) · Genome Research · doi:10.1101/gr.078212.108 · Cited by 2,638 · see citing works
Improved whole-chromosome phasing for disease and population genetic studies
Delaneau, O., Zagury, J., & Marchini, J. (2012) · Nature Methods · doi:10.1038/nmeth.2307 · Cited by 1,309 · see citing works
Schwab, M. (2011) · Springer eBooks · doi:10.1007/978-3-642-16483-5_4730 · Cited by 1,241 · see citing works
Lindor, K. D., Gershwin, E. M., Poupon, R., Kaplan, M., Bergasa, N. V., & Heathcote, J. E. (2009) · Hepatology · doi:10.1002/hep.22906 · Cited by 1,099 · see citing works
Structural Basis of Protein Kinase C Isoform Function
Steinberg, S. (2008) · Physiological Reviews · doi:10.1152/physrev.00034.2007 · Cited by 922 · see citing works
FINEMAP: efficient variable selection using summary data from genome-wide association studies
Benner, C., Spencer, C. C. A., Havulinna, A. S., Salomaa, V., Ripatti, S., & Pirinen, M. (2016) · Bioinformatics · doi:10.1093/bioinformatics/btw018 · Cited by 815 · see citing works
Biological interpretation of genome-wide association studies using predicted gene functions
Pers, T. H., Karjalainen, J. M., Chan, Y., Westra, H.-J., Wood, A. R., Yang, J., Lui, J. C., Vedantam, S., Gustafsson, S., Esko, T., et al. (2015) · Nature Communications · doi:10.1038/ncomms6890 · Cited by 787 · see citing works
Primary Biliary Cirrhosis Associated with <i>HLA, IL12A,</i> and <i>IL12RB2</i> Variants
Hirschfield, G. M., Liu, X., Xu, C., Lu, Y., Xie, G., Lu, Y., Gu, X., Walker, E. J., Jing, K., Juran, B. D., et al. (2009) · New England Journal of Medicine · doi:10.1056/nejmoa0810440 · Cited by 594 · see citing works
Primary biliary cirrhosis in monozygotic and dizygotic twins: Genetics, epigenetics, and environment
Selmi, C., Mayo, M. J., Bach, N., Ishibashi, H., Invernizzi, P., Gish, R. G., Gordon, S. C., Wright, H. I., Zweiban, B., Podda, M., et al. (2004) · Gastroenterology · doi:10.1053/j.gastro.2004.05.005 · Cited by 480 · see citing works
Self-citationGenome-wide association study identifies 12 new susceptibility loci for primary biliary cirrhosis
The UK PBC Consortium, Mells, G. F., The Wellcome Trust Case Control Consortium 3, Floyd, J. A. B., Morley, K. I., Cordell, H. J., Franklin, C. S., Shin, S.-Y., Heneghan, M. A., Neuberger, J. M., et al. (2011) · Nature Genetics · doi:10.1038/ng.789 · Cited by 464 · see citing works
Genome-wide meta-analyses identify three loci associated with primary biliary cirrhosis
Liu, X., Invernizzi, P., Lu, Y., Kosoy, R., Lu, Y., Bianchi, I., Podda, M., Xu, C., Xie, G., Macciardi, F., et al. (2010) · Nature Genetics · doi:10.1038/ng.627 · Cited by 398 · see citing works
Rare variant discovery by deep whole-genome sequencing of 1,070 Japanese individuals
Nagasaki, M., Yasuda, J., Katsuoka, F., Nariai, N., Kojima, K., Kawai, Y., Yamaguchi‐Kabata, Y., Yokozawa, J., Danjoh, I., Saito, S., et al. (2015) · Nature Communications · doi:10.1038/ncomms9018 · Cited by 392 · see citing works
Self-citationBerthiaume, L. G. (2013) · Nature Chemical Biology · doi:10.1038/nchembio.1414 · Cited by 367 · see citing works
Yamaguchi‐Kabata, Y., Nakazono, K., Takahashi, A., Saito, S., Hosono, N., Kubo, M., Nakamura, Y., & Kamatani, N. (2008) · The American Journal of Human Genetics · doi:10.1016/j.ajhg.2008.08.019 · Cited by 348 · see citing works
Self-citationCordell, H. J., Han, Y., Mells, G. F., Li, Y., Hirschfield, G. M., Greene, C. S., Xie, G., Juran, B. D., Zhu, D., Qian, D. C., et al. (2015) · Nature Communications · doi:10.1038/ncomms9019 · Cited by 287 · see citing works
Dense fine-mapping study identifies new susceptibility loci for primary biliary cirrhosis
The UK Primary Biliary Cirrhosis (PBC) Consortium, Liu, J. Z., The Wellcome Trust Case Control Consortium 3, Almarri, M. A., Gaffney, D. J., Mells, G. F., Jostins, L., Cordell, H. J., Ducker, S. J., Day, D. B., et al. (2012) · Nature Genetics · doi:10.1038/ng.2395 · Cited by 274 · see citing works
Nakamura, M., Nishida, N., Kawashima, M., Aiba, Y., Tanaka, A., Yasunami, M., Nakamura, H., Komori, A., Nakamuta, M., Zeniya, M., et al. (2012) · The American Journal of Human Genetics · doi:10.1016/j.ajhg.2012.08.010 · Cited by 267 · see citing works
Self-citationThe Genotype-Tissue Expression (GTEx) project
Lonsdale, J., Thomas, J., Salvatore, M., Phillips, R., Lo, E., Shad, S., Hasz, R., Walters, G., Garcia, F., Young, N., et al. (2013) · Nature Genetics · doi:10.1038/ng.2653 · Cited by 263 · see citing works
Hirschfield, G. M., & Heathcote, E. J. (2010) · Wiley eBooks · doi:10.1002/9781444314403.ch32 · Cited by 260 · see citing works
Variants at IRF5-TNPO3, 17q12-21 and MMEL1 are associated with primary biliary cirrhosis
Hirschfield, G. M., Liu, X., Han, Y., Gorlov, I. P., Lu, Y., Xu, C., Lu, Y., Chen, W., Juran, B. D., Coltescu, C., et al. (2010) · Nature Genetics · doi:10.1038/ng.631 · Cited by 215 · see citing works
Juran, B. D., Hirschfield, G. M., Invernizzi, P., Atkinson, E. J., Li, Y., Xie, G., Kosoy, R., Ransom, M., Sun, Y., Bianchi, I., et al. (2012) · Human Molecular Genetics · doi:10.1093/hmg/dds359 · Cited by 150 · see citing works
PRKCB/protein kinase C, beta and the mitochondrial axis as key regulators of autophagy
Patergnani, S., Marchi, S., Rimessi, A., Bonora, M., Giorgi, C., Mehta, K. D., & Pinton, P. (2013) · Autophagy · doi:10.4161/auto.25239 · Cited by 94 · see citing works
Association study of 44 candidate genes with depressive and anxiety symptoms in post-partum women
Costas, J., Gratacòs, M., Escaramís, G., Martín‐Santos, R., de Diego‐Otero, Y., Baca‐García, E., Cañellas, F., Estivill, X., Guillamat, R., Guitart, M., et al. (2010) · Journal of Psychiatric Research · doi:10.1016/j.jpsychires.2009.12.012 · Cited by 90 · see citing works
Hirschfield, G. M., Xie, G., Lu, E., Sun, Y., Juran, B. D., Chellappa, V, Coltescu, C., Mason, A. L., Milkiewicz, P., Myers, R. P., et al. (2012) · Genes & Immunity · doi:10.1038/gene.2011.89 · Cited by 85 · see citing works
Protein Kinase C (PKC ): Nomal Functions and Dieases
Kawakami, T., Kawakami, Y., & Kitaura, J. (2002) · The Journal of Biochemistry · doi:10.1093/oxfordjournals.jbchem.a003273 · Cited by 80 · see citing works
Sheng, Y.-J., Gao, J.-P., Li, J., Han, J.-W., Xu, Q., Hu, W., Pan, T.-M., Cheng, Y., Yu, Z., Ni, C., et al. (2010) · Lara D. Veeken · doi:10.1093/rheumatology/keq313 · Cited by 66 · see citing works
Ronald, C. W. (2010) · JAMA · doi:10.1001/jama.2010.1191 · Cited by 61 · see citing works
Pathway-based analysis of primary biliary cirrhosis genome-wide association studies
Kar, S., Seldin, M. F., Chen, W., Lu, E., Hirschfield, G. M., Invernizzi, P., Heathcote, J., Cusi, D., the Italian PBC Genetics Study Group, Almasio, P. L., et al. (2013) · Genes and Immunity · doi:10.1038/gene.2013.1 · Cited by 55 · see citing works
Multiple genetic variants associated with primary biliary cirrhosis in a Han Chinese population
Dong, M., Li, J., Tang, R., Zhu, P., Qiu, F., Wang, C., Qiu, J., Wang, L., Dai, Y., Xu, P., et al. (2015) · Clinical Reviews in Allergy & Immunology · doi:10.1007/s12016-015-8472-0 · Cited by 54 · see citing works
Appropriate data cleaning methods for genome-wide association study
Miyagawa, T., Nishida, N., Ohashi, J., Kimura, R., Fujimoto, A., Kawashima, M., Koike, A., Sasaki, T., Tanii, H., Otowa, T., et al. (2008) · Journal of Human Genetics · doi:10.1007/s10038-008-0322-y · Cited by 52 · see citing works
Self-citationImplications of genome‐wide association studies in novel therapeutics in primary biliary cirrhosis
Carbone, M., Lleò, A., Sandford, R. N., & Invernizzi, P. (2014) · European Journal of Immunology · doi:10.1002/eji.201344270 · Cited by 38 · see citing works
Lin, R., Taylor, B. V., Simpson, S., Charlesworth, J., Ponsonby, A., Pittas, F., Dwyer, T., & van der Mei, I. A. F. (2013) · Journal of Neurology Neurosurgery & Psychiatry · doi:10.1136/jnnp-2013-305245 · Cited by 33 · see citing works
Hitomi, Y., Kawashima, M., Aiba, Y., Nishida, N., Matsuhashi, M., Okazaki, H., Nakamura, M., & Tokunaga, K. (2015) · Human Genetics · doi:10.1007/s00439-015-1556-3 · Cited by 30 · see citing works
Self-citationEmerging role of protein kinase C in energy homeostasis: A brief overview
Mehta, K. D. (2014) · World Journal of Diabetes · doi:10.4239/wjd.v5.i3.385 · Cited by 24 · see citing works
Protein Kinase Cβ Is Required for Lupus Development in Sle Mice
Oleksyn, D. W., Pulvino, M. J., Zhao, J., Misra, R., Vosoughi, A., Jenks, S. A., Tipton, C. M., Lund, F. E., Schwartz, G. J., Goldman, B., et al. (2012) · Arthritis & Rheumatism · doi:10.1002/art.37825 · Cited by 17 · see citing works
Teh, C. E., Horikawa, K., Arnold, C. N., Beutler, B., Kucharska, E. M., Vinuesa, C. G., Bertram, E. M., Goodnow, C. C., & Enders, A. (2013) · Genes and Immunity · doi:10.1038/gene.2013.11 · Cited by 6 · see citing works
(2012) · Autophagy · doi:10.4161/auto.22782 · Cited by 6 · see citing works
Posti, J. P., Salo, P. P., Ruohonen, S., Valve, L., Muszkat, M., Sofowora, G. G., Kurnik, D., Stein, C. M., Perola, M., Scheinin, M., et al. (2013) · Pharmacogenetics and Genomics · doi:10.1097/fpc.0b013e32835d247f · Cited by 5 · see citing works
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Sorted by citations
Lleo, A., Wang, G.-Q., Gershwin, M. E., & Hirschfield, G. M. (2020) · The Lancet · doi:10.1016/s0140-6736(20)31607-x · Cited by 253 · see citing works
Cordell, H. J., Fryett, J. J., Ueno, K., Darlay, R., Aiba, Y., Hitomi, Y., Kawashima, M., Nishida, N., Khor, S.-S., Gervais, O., et al. (2021) · Journal of Hepatology · doi:10.1016/j.jhep.2021.04.055 · Cited by 182 · see citing works
Self-citationTanaka, A., Ma, X., Takahashi, A., & Vierling, J. M. (2024) · The Lancet · doi:10.1016/s0140-6736(24)01303-5 · Cited by 177 · see citing works
Self-citationCurrent understanding of primary biliary cholangitis
Tanaka, A. (2020) · Clinical and Molecular Hepatology · doi:10.3350/cmh.2020.0028 · Cited by 159 · see citing works
Self-citationSalem, S., Salem, D., & Gros, P. (2020) · Human Genetics · doi:10.1007/s00439-020-02154-2 · Cited by 124 · see citing works
Li, X., Christenson, S. A., Modena, B. D., Li, H., Busse, W. W., Castro, M., Denlinger, L. C., ERZURUM, S. C., Fahy, J. V., Gaston, B. M., et al. (2020) · Journal of Allergy and Clinical Immunology · doi:10.1016/j.jaci.2020.07.030 · Cited by 92 · see citing works
Jia, X., Yamamura, T., Gbadegesin, R., McNulty, M. T., Song, K., Nagano, C., Hitomi, Y., Lee, D., Aiba, Y., Khor, S., et al. (2020) · Kidney International · doi:10.1016/j.kint.2020.05.029 · Cited by 71 · see citing works
Self-citationX Chromosome Contribution to the Genetic Architecture of Primary Biliary Cholangitis
Asselta, R., Paraboschi, E. M., Gerussi, A., Cordell, H. J., Mells, G. F., Sandford, R. N., Jones, D. E., Nakamura, M., Ueno, K., Hitomi, Y., et al. (2021) · Gastroenterology · doi:10.1053/j.gastro.2021.02.061 · Cited by 55 · see citing works
Self-citationGenetics and epigenetics in the pathogenesis of primary biliary cholangitis
Joshita, S., Umemura, T., Tanaka, E., & Ôta, M. (2017) · Clinical Journal of Gastroenterology · doi:10.1007/s12328-017-0799-z · Cited by 51 · see citing works
Self-citationPI3K/mTOR is a therapeutically targetable genetic dependency in diffuse intrinsic pontine glioma
Duchatel, R. J., Jackson, E. R., Parackal, S., Kiltschewskij, D. J., Findlay, I. J., Mannan, A., Staudt, D. E., Thomas, B. C., Germon, Z. P., Laternser, S., et al. (2024) · Journal of Clinical Investigation · doi:10.1172/jci170329 · Cited by 45 · see citing works
Hitomi, Y., Kojima, K., Kawashima, M., Kawai, Y., Nishida, N., Aiba, Y., Yasunami, M., Nagasaki, M., Nakamura, M., & Tokunaga, K. (2017) · Scientific Reports · doi:10.1038/s41598-017-03067-3 · Cited by 43 · see citing works
Self-citationSerum Autotaxin Is a Useful Disease Progression Marker in Patients with Primary Biliary Cholangitis
Joshita, S., Umemura, T., Usami, Y., Yamashita, Y., Norman, G. L., Sugiura, A., Yamazaki, T., Fujimori, N., Kimura, T., Matsumoto, A., et al. (2018) · Scientific Reports · doi:10.1038/s41598-018-26531-0 · Cited by 41 · see citing works
Self-citationEvolution of our understanding of PBC
Tanaka, A., Leung, P. S. C., & Gershwin, M. E. (2018) · Best Practice & Research Clinical Gastroenterology · doi:10.1016/j.bpg.2018.05.008 · Cited by 40 · see citing works
Self-citationWang, C., Zheng, X., Jiang, P., Tang, R., Gong, Y., Dai, Y., Wang, L., Xu, P., Sun, W., Wang, L., et al. (2019) · Hepatology · doi:10.1002/hep.30604 · Cited by 36 · see citing works
Matsumoto, K., Ohfuji, S., Abe, M., Komori, A., Takahashi, A., Fujii, H., Kawata, K., Noritake, H., Tadokoro, T., Honda, A., et al. (2022) · Journal of Gastroenterology · doi:10.1007/s00535-021-01836-6 · Cited by 35 · see citing works
Self-citationThe Genetics and Epigenetics of Primary Biliary Cholangitis
Tanaka, A., Leung, P. S. C., & Gershwin, M. E. (2018) · Clinics in Liver Disease · doi:10.1016/j.cld.2018.03.002 · Cited by 33 · see citing works
Self-citationAberrant expression of alternative splicing variants in multiple sclerosis – A systematic review
Hecker, M., Rüge, A., Putscher, E., Boxberger, N., Rommer, P. S., Fitzner, B., & Zettl, U. K. (2019) · Autoimmunity Reviews · doi:10.1016/j.autrev.2019.05.010 · Cited by 34 · see citing works
HLA, gut microbiome and hepatic autoimmunity
Beretta‐Piccoli, B. T., Mieli‐Vergani, G., & Vergani, D. (2022) · Frontiers in Immunology · doi:10.3389/fimmu.2022.980768 · Cited by 32 · see citing works
Yasunami, M., Nakamura, H., Tokunaga, K., Kawashima, M., Nishida, N., Hitomi, Y., & Nakamura, M. (2017) · Scientific Reports · doi:10.1038/s41598-017-11148-6 · Cited by 31 · see citing works
Self-citationThe genetic architecture of primary biliary cholangitis
Gerussi, A., Carbone, M., Corpechot, C., Schramm, C., Asselta, R., & Invernizzi, P. (2021) · European Journal of Medical Genetics · doi:10.1016/j.ejmg.2021.104292 · Cited by 31 · see citing works
The genetics of primary biliary cholangitis
Tanaka, A., Leung, P. S. C., & Gershwin, M. E. (2018) · Current Opinion in Gastroenterology · doi:10.1097/mog.0000000000000507 · Cited by 30 · see citing works
Self-citationHitomi, Y., Nakatani, K., Kojima, K., Nishida, N., Kawai, Y., Kawashima, M., Aiba, Y., Nagasaki, M., Nakamura, M., & Tokunaga, K. (2018) · Cellular and Molecular Gastroenterology and Hepatology · doi:10.1016/j.jcmgh.2018.11.006 · Cited by 29 · see citing works
Self-citationHitomi, Y., Ueno, K., Kawai, Y., Nishida, N., Kojima, K., Kawashima, M., Aiba, Y., Nakamura, H., Kouno, H., Kouno, H., et al. (2019) · Scientific Reports · doi:10.1038/s41598-018-36490-1 · Cited by 29 · see citing works
Self-citationMechanism-based target therapy in primary biliary cholangitis: opportunities before liver cirrhosis?
Yang, Y., He, X.-S., Rojas, M., Leung, P. S. C., & Gao, L. (2023) · Frontiers in Immunology · doi:10.3389/fimmu.2023.1184252 · Cited by 29 · see citing works
The Genetics of Primary Biliary Cholangitis: A GWAS and Post-GWAS Update
Hitomi, Y., & Nakamura, M. (2023) · Genes · doi:10.3390/genes14020405 · Cited by 26 · see citing works
Self-citationClinical utility of FibroScan as a non‐invasive diagnostic test for primary biliary cholangitis
Joshita, S., Yamashita, Y., Sugiura, A., Uehara, T., Usami, Y., Yamazaki, T., Fujimori, N., Matsumoto, A., Tanaka, E., & Umemura, T. (2019) · Journal of Gastroenterology and Hepatology · doi:10.1111/jgh.14929 · Cited by 26 · see citing works
Self-citationUmemura, T., Joshita, S., Hamano, H., Yoshizawa, K., Kawa, S., Tanaka, E., & Ota, M. (2017) · Journal of Human Genetics · doi:10.1038/jhg.2017.74 · Cited by 23 · see citing works
Self-citationTanaka, A., Kono, H., Leung, P. S. C., & Gershwin, M. E. (2019) · Cellular Immunology · doi:10.1016/j.cellimm.2019.104021 · Cited by 22 · see citing works
Self-citationUeno, K., Aiba, Y., Hitomi, Y., Shimoda, S., Nakamura, H., Gervais, O., Kawai, Y., Kawashima, M., Nishida, N., Kohn, S.-S., et al. (2020) · Hepatology Communications · doi:10.1002/hep4.1497 · Cited by 21 · see citing works
Self-citationPopulation-Specific Genetic and Expression Differentiation in Europeans
Jiang, X., & Assis, R. (2020) · Genome Biology and Evolution · doi:10.1093/gbe/evaa021 · Cited by 18 · see citing works
Epigenetics of Primary Biliary Cholangitis
Li, Y., Tang, R., & Ma, X. (2020) · Advances in experimental medicine and biology · doi:10.1007/978-981-15-3449-2_10 · Cited by 14 · see citing works
New insights on the role of human leukocyte antigen complex in primary biliary cholangitis
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Khor, S., Ueno, K., Nishida, N., Kawashima, M., Kawai, Y., Aiba, Y., Hitomi, Y., Nagasaki, M., Nakamura, M., & Tokunaga, K. (2023) · Frontiers in Immunology · doi:10.3389/fimmu.2023.1151502 · Cited by 12 · see citing works
Self-citationHitomi, Y., Aiba, Y., Kawai, Y., Kojima, K., Ueno, K., Nishida, N., Kawashima, M., Gervais, O., Khor, S., Nagasaki, M., et al. (2021) · Scientific Reports · doi:10.1038/s41598-021-84042-x · Cited by 12 · see citing works
Self-citationGervais, O., Ueno, K., Kawai, Y., Hitomi, Y., Aiba, Y., Ueta, M., Nakamura, M., Tokunaga, K., & Nagasaki, M. (2021) · European Journal of Human Genetics · doi:10.1038/s41431-021-00854-5 · Cited by 12 · see citing works
Self-citationNishida, N., Aiba, Y., Hitomi, Y., Kawashima, M., Kojima, K., Kawai, Y., Ueno, K., Nakamura, H., Yamashiki, N., Tanaka, T., et al. (2018) · Scientific Reports · doi:10.1038/s41598-018-26369-6 · Cited by 11 · see citing works
Self-citationGenome-wide haplotype association analysis of primary biliary cholangitis risk in Japanese
Im, C., Sapkota, Y., Moon, W., Kawashima, M., Nakamura, M., Tokunaga, K., & Yasui, Y. (2018) · Scientific Reports · doi:10.1038/s41598-018-26112-1 · Cited by 8 · see citing works
Self-citationGenetics of Autoimmune Liver Diseases
Gerussi, A., Carbone, M., Asselta, R., & Invernizzi, P. (2020) · Springer eBooks · doi:10.1007/978-3-030-51709-0_5 · Cited by 6 · see citing works
Hitomi, Y., & Tokunaga, K. (2017) · Proceedings of the Japan Academy Series B · doi:10.2183/pjab.93.042 · Cited by 6 · see citing works
Self-citationGenetic architecture of primary biliary cholangitis: strong evidence for HLA and non-HLA risk loci
Zhang, M., Lyu, L., Ge, L., Wang, Y., & Gu, D. (2025) · Frontiers in Immunology · doi:10.3389/fimmu.2025.1600364 · Cited by 4 · see citing works
Сергеевна, С. Е., Vinnitskaya, E. V., Николаевич, Б. С., Sandler, Y. G., Германович, С. К., Кhaimenova, T. Y., & Bordin, D. S. (2023) · Terapevticheskii arkhiv · doi:10.26442/00403660.2023.02.202113 · Cited by 4 · see citing works
Wu, Z., Li, H., Xu, H., Feng, F., Zhang, F., Zhang, S., Wang, L., & Li, Y. (2023) · Hepatology International · doi:10.1007/s12072-023-10586-x · Cited by 4 · see citing works
Primary Biliary Cholangitis with Ankylosing Spondylitis
Hong, Y. M., Yoon, K. T., & Cho, M. (2022) · Korean Journal of Gastroenterology · doi:10.4166/kjg.2022.048 · Cited by 3 · see citing works
Epigenetics of autoimmune liver diseases: current progress and future directions
Liu, Q., Li, Y., Ma, X., & Tang, R. (2019) · Journal of Bio-X Research · doi:10.1097/jbr.0000000000000030 · Cited by 3 · see citing works
Jawed, R., Zhang, M., Wang, C., Yang, S., Jiang, P., Wu, Q., Li, L., Chen, W., Gershwin, M. E., Tian, Y., et al. (2020) · Immunogenetics · doi:10.1007/s00251-020-01192-4 · Cited by 2 · see citing works
The Pathogenesis of Autoimmune Liver Diseases
Kovalic, A. J., & Bonkovsky, H. L. (2020) · Springer eBooks · doi:10.1007/978-3-030-33628-8_2 · Cited by 2 · see citing works
Yang, Y., Ma, X., Zhou, C., Xu, N., Ding, D., Ma, Z., Zhou, L., & Cui, P. (2024) · World Journal of Clinical Cases · doi:10.12998/wjcc.v12.i30.6391 · Cited by 1 · see citing works
Chong, A., Brenner, N., Jiménez-Kaufmann, A., Cortes, A., Hill, M., Littlejohns, T., Gilchrist, J., Fairfax, B., Knight, J. C., Hodel, F., et al. (2024) · American Journal of Human Genetics · doi:10.1016/j.ajhg.2023.12.013 · Cited by 1 · see citing works
Geoepidemiology of Autoimmune Liver Diseases
Lyu, Z., Gershwin, M. E., & Ma, X. (2020) · Springer eBooks · doi:10.1007/978-3-030-51709-0_11 · Cited by 1 · see citing works
Primary Biliary Cirrhosis, Primary Sclerosing Cholangitis, and Autoimmune Hepatitis
González‐Serna, D., Kerick, M., & Martin, J. J. (2019) · Rare diseases of the immune system · doi:10.1007/978-3-030-03934-9_9
Genetics and Risk of Autoimmune Liver Diseases
Mells, G. F. (2020) · doi:10.1002/9781119532637.ch3
Manzoori, S., Torshizi, R. V., Masoudi, A. A., & Momen, M. M. (2025) · Journal of Animal Breeding and Genetics · doi:10.1111/jbg.12926
Shu, Y., Rai, A., Sizemore, G. M., Ostrowski, M. C., Huang, W., & Mehta, K. D. (2025) · American Journal of Physiology-Gastrointestinal and Liver Physiology · doi:10.1152/ajpgi.00208.2025
- Authors
- Kawashima, M., Hitomi, Y., Aiba, Y., Nishida, N., Kojima, K., Kawai, Y., Nakamura, H., Tanaka, A., Zeniya, M., Hashimoto, E., Ohira, H., Yamamoto, K., Abe, M., Nakao, K., Yamagiwa, S., Kaneko, S., Honda, M., Umemura, T., Ichida, T., Seike, M., Sakisaka, S., Harada, M., Yokosuka, O., Ueno, Y., Senju, M., Kanda, T., Shibata, H., Himoto, T., Murata, K., Miyake, Y., Ebinuma, H., Taniai, M., Joshita, S., Nikami, T., Ota, H., Kouno, H., Kouno, H., Nakamuta, M., Fukushima, N., Kohjima, M., Komatsu, T., Komeda, T., Ohara, Y., Muro, T., Yamashita, T., Yoshizawa, K., Nakamura, Y., Shimada, M., Hirashima, N., Sugi, K., Ario, K., Takesaki, E., Naganuma, A., Mano, H., Yamashita, H., Matsushita, K., Yamauchi, K., Makita, F., Nishimura, H., Furuta, K., Takahashi, N., Kikuchi, M., Masaki, N., Tanaka, T., Tamura, S., Mori, A., Yagi, S., Shirabe, K., Komori, A., Migita, K., Ito, M., Nagaoka, S., Abiru, S., Yatsuhashi, H., Yasunami, M., Shimoda, S., Harada, K., Egawa, H., Maehara, Y., Uemoto, S., Kokudo, N., Takikawa, H., Ishibashi, H., Chayama, K., Mizokami, M., Nagasaki, M., Tokunaga, K., & Nakamura, M.
- Affiliations
- The University of Tokyo (JP)
- Nagasaki Medical Center (JP)
- National Center for Global Health and Medicine (JP)
- Tohoku University (JP)
- Teikyo University (JP)
- Jikei University School of Medicine (JP)
- Tokyo Women's Medical University (JP)
- Fukushima Medical University (JP)
- Okayama University (JP)
- Ehime University (JP)
- Nagasaki University (JP)
- Niigata University (JP)
- Kanazawa University (JP)
- Shinshu University (JP)
- Juntendo University (JP)
- Oita University (JP)
- Fukuoka University (JP)
- University of Occupational and Environmental Health Japan (JP)
- Chiba University (JP)
- Yamagata University (JP)
- Kagawa Prefectural College of Health Sciences (JP)
- Keio University (JP)
- Kyoto University (JP)
- Kyushu University (JP)
- Hiroshima University (JP)
- Corresponding author
- Nakamura, Minoru
- ORCID
- Kawashima, Minae
- Hitomi, Yuki
- Aiba, Yoshihiro
- Nishida, Nao
- Kojima, Kaname
- Kawai, Yosuke
- Nakamura, Hitomi
- Tanaka, Atsushi
- Zeniya, Mikio
- Ohira, Hiromasa
- Abe, Masanori
- Nakao, Kazuhiko
- Yamagiwa, Satoshi
- Kaneko, Shuichi
- Honda, Masao
- Umemura, Takeji
- Seike, Masataka
- Sakisaka, Shotaro
- Harada, Masaru
- Yokosuka, Osamu
- Ueno, Yoshiyuki
- Kanda, Tatsuo
- Himoto, Takashi
- Murata, Kazumoto
- Ebinuma, Hirotoshi
- Taniai, Makiko
- Joshita, Satoru
- Nakamuta, Makoto
- Kohjima, Motoyuki
- Yoshizawa, Kaname
- Nakamura, Yoko
- Shimada, Masaaki
- Naganuma, Atsushi
- Yamashita, Haruhiro
- Takahashi, Naohiro
- Kikuchi, Masahiro
- Masaki, Naohiko
- Tanaka, Tomohiro
- Mori, Akira
- Yagi, Shintaro
- Shirabe, Ken
- Komori, Atsumasa
- Migita, Kiyoshi
- Ito, Masahiro
- Nagaoka, Shinya
- Yatsuhashi, Hiroshi
- Yasunami, Michio
- Shimoda, Shinji
- Harada, Kenichi
- Egawa, Hiroto
- Maehara, Yoshihiko
- Kokudo, Norihiro
- Takikawa, Hajime
- Ishibashi, Hiromi
- Chayama, Kazuaki
- Mizokami, Masashi
- Nagasaki, Masao
- Tokunaga, Katsushi
- Venue
- Human Molecular Genetics
- Publisher
- Oxford University Press (OUP)
- Published
- 2017-01-05
- Volume
- 26
- Issue
- 3
- Pages
- ddw406
- ISSN
- 0964-6906 (ISSN-L)
- 1460-2083
- OpenAlex
- W2571345089
- Cited by
- 52
- References
- 41
- Citations by year
- 2025: 3 · 2024: 3 · 2023: 5 · 2022: 3 · 2021: 6 · 2020: 13 · 2019: 7 · 2018: 7 · 2017: 5
- FWCI
- 4.55
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Locations
- Human Molecular Genetics (publishedVersion)
- PubMed (publishedVersion)
- Funders
- Japan Agency for Medical Research and Development (16km0405205h0101)
- Ministry of Education, Culture, Sports, Science and Technology (23591006, 26293181, 15K19357)
- Ministry of Health, Labour and Welfare (23591006)
- SENSHIN Medical Research Foundation
- Japan Society for the Promotion of Science (15K19314, 26460996, 16K21069, 16H05283, 15K19357, 15K06908, 26293181, 15H04809, 23591006)
- Center of Innovation Program
- Topics
- Health Sciences › Medicine › Hepatology › Liver Diseases and Immunity
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic Associations and Epidemiology
- Health Sciences › Medicine › Surgery › Pediatric Hepatobiliary Diseases and Treatments
- Keywords
- primary biliary cirrhosis, protein kinase C beta, genetic susceptibility loci, TNFSF15, POU2AF1, Japanese population, genotype imputation, functional variants, disease pathways
- MeSH terms
- Female, Genotype, Humans, Japan, Liver Cirrhosis, Biliary, Male, Genetic Predisposition to Disease, Polymorphism, Single Nucleotide, Asian People, Genome-Wide Association Study, Protein Kinase C beta
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