The DOI matches its Crossref record; 49 of the 49 references it cites were found in a registry or an index.
Genome-wide identification and functional prediction of novel and drought-responsive lincRNAs in Populus trichocarpa
Open accessAbstract
Protein-coding genes are considered to be a dominant component of the eukaryotic transcriptome; however, many studies have shown that intergenic, non-coding transcripts also play an important role. Long intergenic non-coding RNAs (lincRNAs) were found to play a vital role in human and Arabidopsis. However, lincRNAs and their regulatory roles remain poorly characterized in woody plants, especially Populus trichocarpa (P. trichocarpa). A large set of Populus RNA-Seq data were examined with high sequencing depth under control and drought conditions and a total of 2542 lincRNA candidates were identified. In total, 51 lincRNAs and 20 lincRNAs were identified as putative targets and target mimics of known Populus miRNAs, respectively. A total of 504 lincRNAs were found to be drought responsive, eight of which were confirmed by RT-qPCR. These findings provide a comprehensive view of Populus lincRNAs, which will enable in-depth functional analysis.
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Cited by
Plant Immunity: From Signaling to Epigenetic Control of Defense
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Metadata
- Authors
- Shuai, P., Liang, D., Tang, S., Zhang, Z., Ye, C.-Y., Su, Y., Xia, X., & Yin, W.
- Venue
- Journal of Experimental Botany
- Publisher
- Oxford University Press (OUP)
- Published
- 2014-06-19
- Volume
- 65
- Issue
- 17
- Pages
- 4975-4983
- ISSN
- 0022-0957 (ISSN-L)
- 1460-2431
- OpenAlex
- W2121509777
- Cited by
- 310
- References
- 49
- FWCI
- 23.79
- Type
- journal article
- Language
- en
- Open access
- hybrid
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- Shuai, P., Liang, D., Tang, S., Zhang, Z., Ye, C.-Y., Su, Y., Xia, X., & Yin, W. (2014). Genome-wide identification and functional prediction of novel and drought-responsive lincRNAs in Populus trichocarpa. Journal of Experimental Botany. https://doi.org/10.1093/jxb/eru256
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