The DOI matches its Crossref record; 3 of the 3 references it cites were found in a registry or an index.
Gene Loss and Evolutionary Rates Following Whole-Genome Duplication in Teleost Fishes
Open accessAbstract
Teleost fishes provide the first unambiguous support for ancient whole-genome duplication in an animal lineage. Studies in yeast or plants have shown that the effects of such duplications can be mediated by a complex pattern of gene retention and changes in evolutionary pressure. To explore such patterns in fishes, we have determined by phylogenetic analysis the evolutionary origin of 675 Tetraodon duplicated genes assigned to chromosomes, using additional data from other species of actinopterygian fishes. The subset of genes, which was retained in double after the genome duplication, is enriched in development, signaling, behavior, and regulation functional categories. The evolutionary rate of duplicate fish genes appears to be determined by 3 forces: 1) fish proteins evolve faster than mammalian orthologs; 2) the genes kept in double after genome duplication represent the subset under strongest purifying selection; and 3) following duplication, there is an asymmetric acceleration of evolutionary rate in one of the paralogs. These results show that similar mechanisms are at work in fishes as in yeast or plants and provide a framework for future investigation of the consequences of duplication in fishes and other animals.
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Cites
Gene Ontology: tool for the unification of biology
Ashburner, M., Ball, C. A., Blake, J. A., Botstein, D., Butler, H., Cherry, J. M., Davis, A. P., Dolinski, K., Dwight, S. S., Eppig, J. T., et al. (2000) · Nature Genetics · doi:10.1038/75556 · Cited by 43,206
The Evolutionary Fate and Consequences of Duplicate Genes
Lynch, M., & Conery, J. S. (2000) · Science · doi:10.1126/science.290.5494.1151 · Cited by 4,988
Jaillon, O., Aury, J.-M., Brunet, F., Petit, J.-L., Stange-Thomann, N., Mauceli, E., Bouneau, L., Fischer, C., Ozouf-Costaz, C., Bernot, A., et al. (2004) · Nature · doi:10.1038/nature03025 · Cited by 1,966
Self-citation
Cited by
The evolutionary significance of ancient genome duplications
Van de Peer, Y., Maere, S., & Meyer, A. (2009) · Nature Reviews Genetics · doi:10.1038/nrg2600 · Cited by 1,129
Whole-genome duplication in teleost fishes and its evolutionary consequences
Glasauer, S. M. K., & Neuhauss, S. C. F. (2014) · Molecular Genetics and Genomics · doi:10.1007/s00438-014-0889-2 · Cited by 877
Development of the corticosteroid stress axis and receptor expression in zebrafish
Alsop, D., & Vijayan, M. M. (2008) · American Journal of Physiology-Regulatory, Integrative and Comparative Physiology · doi:10.1152/ajpregu.00671.2007 · Cited by 429
Survey Sequencing and Comparative Analysis of the Elephant Shark (Callorhinchus milii) Genome
Venkatesh, B., Kirkness, E. F., Loh, Y.-H., Halpern, A. L., Lee, A. P., Johnson, J., Dandona, N., Viswanathan, L. D., Tay, A., Venter, J. C., et al. (2007) · PLoS Biology · doi:10.1371/journal.pbio.0050101 · Cited by 309
New Gene Evolution: Little Did We Know
Long, M., VanKuren, N. W., Chen, S., & Vibranovski, M. D. (2013) · Annual Review of Genetics · doi:10.1146/annurev-genet-111212-133301 · Cited by 307
Metadata
- Authors
- Brunet, F. G., Crollius, H. R., Paris, M., Aury, J.-M., Gibert, P., Jaillon, O., Laudet, V., & Robinson-Rechavi, M.
- Venue
- Molecular Biology and Evolution
- Publisher
- Oxford University Press (OUP)
- Published
- 2006-06-29
- Volume
- 23
- Issue
- 9
- Pages
- 1808-1816
- ISSN
- 0737-4038 (ISSN-L)
- 1537-1719
- OpenAlex
- W2097128462
- Cited by
- 411
- References
- 3
- FWCI
- 36.02
- Type
- journal article
- Language
- en
- Open access
- hybrid
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- Brunet, F. G., Crollius, H. R., Paris, M., Aury, J.-M., Gibert, P., Jaillon, O., Laudet, V., & Robinson-Rechavi, M. (2006). Gene Loss and Evolutionary Rates Following Whole-Genome Duplication in Teleost Fishes. Molecular Biology and Evolution. https://doi.org/10.1093/molbev/msl049
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