Coordination of AUF1 and miR-148a destabilizes DNA methyltransferase 1 mRNA under hypoxia in endometriosis
Abstract
STUDY HYPOTHESIS: DNA methylation is regulated by hypoxia in endometriosis. STUDY FINDING: Hypoxia causes global hypomethylation through AU-rich element binding factor 1 (AUF1)/microRNA-148a (miR-148a)-mediated destabilization of DNA methyltransferase 1 (DNMT1) mRNA. WHAT IS KNOWN ALREADY: Eutopic endometrial and ectopic endometriotic stromal cells have the same genetic background, but differ in several cellular and molecular responses. Both hypoxia and DNA methylation regulate several genes involved in the development of endometriosis. STUDY DESIGN, SAMPLES/MATERIALS, METHODS: This laboratory study included 15 patients of reproductive age with endometriosis or normal menstrual cycles. Paired endometrial and endometriotic tissues were collected for assaying the levels of DNMT1, 3a and 3b using quantitative RT-PCR, western blot and immunohistochemical (IHC) staining. Primary cultured endometrial stromal cells maintained in normoxia/hypoxia (1% O2) or treated with hypoxia-mimetic compounds were also assayed. The levels of DNA 5-methylcytosine were assayed by using IHC in clinical specimens and murine tissues, and by ELISA in cultured stromal cells. The 3'-untranslated region reporter assay was used to evaluate the effect of hypoxia, microRNAs (miRNAs) and human antigen R (HuR)/AUF1 on DNMT1 mRNA stability. RNA immunoprecipitation was used to assess the interaction of HuR/AUF1 and miR-148a/DNMT1 mRNA under hypoxia. Finally, a transplant-induced mouse model of endometriosis using 20 mice was used to elucidate the alteration of Dnmt1 levels and DNA methylation in the endometriotic tissues. MAIN RESULTS AND THE ROLE OF CHANCE: Levels of DNMT1 mRNA and protein and 5-methylcytosine were lower in the ectopic stromal cells (P < 0.05) than in the eutopic cells. Treatment with hypoxia and its mimetic compounds recapitulated the reduced levels of DNMT1 and 5-methylcytosine levels (P < 0.05 versus control). Hypoxia treatment destabilized DNMT1 mRNA through recruitment of miR-148a and AUF1. Mutations introduced to the miR-148a targeting site or AU-rich element (ARE) restored the hypoxia-suppressed DNMT1 3'-untranslated region (3'-UTR) reporter activity (P < 0.05 versus control). Levels of proteins of three hypermethylated genes in endometrial stroma cells, GATA6, HOXA3 and SLC16A5, were elevated after 72 h of hypoxia treatment (P < 0.05 versus control). Finally, a transplant-induced model of endometriosis demonstrated the down-regulation of DNMT1 and a decrease in 5-methylcytosine in the endometriotic tissues (P < 0.05, eutopic versus ectopic). LIMITATIONS, REASONS FOR CAUTION: Primary human cell cultures and a murine model were used in this study, and thus the results may not fully represent the situation in vivo. WIDER IMPLICATIONS OF THE FINDINGS: This is the first study to elucidate how microenvironmental hypoxia links to the epigenetic effects of DNA methylation in the endometriosis, and to delineate the molecular mechanism of hypoxia-coordinated AUF1/miR-148a interaction and recruitment to DNMT1 mRNA during the pathogenesis of endometriosis. The development of future therapeutics in endometriosis may aim at disrupting this specific interaction and eventually restore the epigenetic regulation. STUDY FUNDING AND COMPETING INTERESTS: This work was supported by the National Science Council of Taiwan (NSC101-2320-B-006-030-MY3). The author declares that there are no conflicts of interest.
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Cites
The microRNA.org resource: targets and expression
Betel, D., Wilson, M. T., Gabow, A. P., Marks, D. S., & Sander, C. (2007) · Nucleic Acids Research · doi:10.1093/nar/gkm995 · Cited by 2,490 · see citing works
miRTarBase: a database curates experimentally validated microRNA–target interactions
Hsu, S.-D., Lin, F., Wu, W.-Y., Liang, C., Huang, W.-C., Chan, W.-L., Tsai, W.-T., Chen, G.-Z., Lee, C.-J., Chiu, C.-M., et al. (2010) · Nucleic Acids Res. · doi:10.1093/nar/gkq1107 · Cited by 1,387 · see citing works
Self-citationmiRDB: A microRNA target prediction and functional annotation database with a wiki interface
Wang, X. (2008) · RNA · doi:10.1261/rna.965408 · Cited by 712 · see citing works
Aromatase expression in endometriosis.
Noble, L. S., Simpson, E. R., Johns, A., & Bulun, S. E. (1996) · The Journal of Clinical Endocrinology & Metabolism · doi:10.1210/jcem.81.1.8550748 · Cited by 566 · see citing works
Concurrent versus individual binding of HuR and AUF1 to common labile target mRNAs
Lal, A., Mazan‐Mamczarz, K., Kawai, T., Yang, X., Martindale, J. L., & Gorospe, M. (2004) · The EMBO Journal · doi:10.1038/sj.emboj.7600305 · Cited by 461 · see citing works
Recruitment of DNA methyltransferase I to DNA repair sites
Mortusewicz, O., Schermelleh, L., Walter, J., Cardoso, M. C., & Leonhardt, H. (2005) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0501034102 · Cited by 380 · see citing works
Promoter Methylation Regulates Estrogen Receptor 2 in Human Endometrium and Endometriosis1
Xue, Q., Lin, Z., Cheng, Y.-H., Huang, C.-C., Marsh, E., Yin, P., Milad, M. P., Confino, E., Reierstad, S., Innes, J., et al. (2007) · Biology of Reproduction · doi:10.1095/biolreprod.107.061804 · Cited by 346 · see citing works
Guo, S.-W. (2009) · Molecular Human Reproduction · doi:10.1093/molehr/gap064 · Cited by 328 · see citing works
Promoter Hypermethylation of Progesterone Receptor Isoform B (PR-B) in Endometriosis
Wu, Y., Strawn, E., Basir, Z., Halverson, G., & Guo, S. (2006) · Epigenetics · doi:10.4161/epi.1.2.2766 · Cited by 323 · see citing works
Hypoxia-driven pathways in bone development, regeneration and disease
Maes, C., Carmeliet, G., & Schipani, E. (2012) · Nature Reviews Rheumatology · doi:10.1038/nrrheum.2012.36 · Cited by 300 · see citing works
Immunoprecipitation of mRNA-protein complexes
Peritz, T., Zeng, F., Kannanayakal, T. J., Kilk, K., Eiríksdóttir, E., Langel, Ü., & Eberwine, J. H. (2006) · Nature Protocols · doi:10.1038/nprot.2006.82 · Cited by 240 · see citing works
Dyson, M. T., Roqueiro, D., Monsivais, D., Ercan, C. M., Pavone, M. E., Brooks, D. C., Kakinuma, T., Ono, M., Jafari, N., Dai, Y., et al. (2014) · PLoS Genetics · doi:10.1371/journal.pgen.1004158 · Cited by 211 · see citing works
Regulation of DNA Methylation in Rheumatoid Arthritis Synoviocytes
Nakano, K., Boyle, D. L., & Firestein, G. S. (2012) · The Journal of Immunology · doi:10.4049/jimmunol.1202572 · Cited by 165 · see citing works
Tsai, S.-J., Wu, M.-H., Lin, C.-C., Sun, H. S., & Chen, H.-M. (2001) · The Journal of Clinical Endocrinology & Metabolism · doi:10.1210/jcem.86.12.8082 · Cited by 155 · see citing works
Self-citationHypoxia in atherosclerosis and inflammation
Marsch, E., Sluimer, J. C., & Daemen, M. J. A. P. (2013) · Current Opinion in Lipidology · doi:10.1097/mol.0b013e32836484a4 · Cited by 140 · see citing works
Prostaglandin E 2 : the master of endometriosis?
Wu, M., Lu, C.-W., Chuang, P., & Tsai, S. (2010) · Experimental Biology and Medicine · doi:10.1258/ebm.2010.009321 · Cited by 135 · see citing works
Self-citationLin, S., Wang, C.-C., Wu, M., Yang, S., Li, Y.-H., & Tsai, S. (2012) · The Journal of Clinical Endocrinology & Metabolism · doi:10.1210/jc.2012-1450 · Cited by 131 · see citing works
Self-citationDistinct Regulation of Cyclooxygenase-2 by Interleukin-1β in Normal and Endometriotic Stromal Cells
Wu, M., Wang, C.-A., Lin, C.-C., Chen, L.-C., Chang, W., & Tsai, S. (2005) · The Journal of Clinical Endocrinology & Metabolism · doi:10.1210/jc.2004-1612 · Cited by 128 · see citing works
Self-citationWu, M., Chen, K., Lin, S., Lgu, C.-W., & Tsai, S. (2007) · American Journal Of Pathology · doi:10.2353/ajpath.2007.060477 · Cited by 120 · see citing works
Self-citationHa, K., Lee, G. E., Palii, S. S., Brown, K. D., Takeda, Y., Liu, K., Bhalla, K. N., & Robertson, K. D. (2010) · Human Molecular Genetics · doi:10.1093/hmg/ddq451 · Cited by 119 · see citing works
HuR Uses AUF1 as a Cofactor To Promote p16<sup>INK4</sup> mRNA Decay
Chang, N., Yi, J., Guo, G., Liu, X., Shang, Y., Tong, T., Cui, Q., Zhan, M., Gorospe, M., & Wang, W. (2010) · Molecular and Cellular Biology · doi:10.1128/mcb.00169-10 · Cited by 112 · see citing works
Self-citationHodge, D. R., Cho, E., Copeland, T. D., Guszczynski, T., Yang, E., Seth, A. K., & Farrar, W. L. (2007) · PubMed · Cited by 108 · see citing works
Lin, S., Chien, C., Lee, J., Yeh, Y.-C., Hsu, K., Lai, Y.-Y., Lin, S.-C., & Tsai, S. (2011) · Journal of Clinical Investigation · doi:10.1172/jci44362 · Cited by 104 · see citing works
Self-citationEndometriosis is characterized by a distinct pattern of histone 3 and histone 4 lysine modifications
Monteiro, J. B., Colón-Díaz, M., García, M., Gutierrez, S., Colón, M., Seto, E., Laboy, J., & Flores, I. (2014) · Reproductive Sciences · doi:10.1177/1933719113497267 · Cited by 98 · see citing works
Oxidative stress causes epigenetic alteration of CDX1 expression in colorectal cancer cells
Zhang, R., Kang, K. A., Kim, K. C., Na, S.-Y., Chang, W. Y., Kim, G., Kim, H. S., & Hyun, J. W. (2013) · Gene · doi:10.1016/j.gene.2013.04.024 · Cited by 94 · see citing works
Trayhurn, P., & Alomar, S. Y. (2015) · Frontiers in Endocrinology · doi:10.3389/fendo.2015.00019 · Cited by 93 · see citing works
Nasu, K., Kawano, Y., Tsukamoto, Y., Takano, M., Takai, N., Li, H., Furukawa, Y., Abe, W., Moriyama, M., & Narahara, H. (2011) · Journal of obstetrics and gynaecology research · doi:10.1111/j.1447-0756.2011.01663.x · Cited by 88 · see citing works
Wu, M.-H. (2002) · Molecular Human Reproduction · doi:10.1093/molehr/8.5.456 · Cited by 77 · see citing works
Self-citationAberrant histone acetylation and methylation levels in woman with endometriosis
Xia, X., Zhao, M., Ma, J., & Xiaoling, F. (2012) · Archives of Gynecology and Obstetrics · doi:10.1007/s00404-012-2591-0 · Cited by 66 · see citing works
Wing, L. C., Chuang, P.-C., Wu, M., Chen, H., & Tsai, S. (2003) · The Journal of Clinical Endocrinology & Metabolism · doi:10.1210/jc.2003-030597 · Cited by 65 · see citing works
Self-citationWu, M., Lin, S., Hsiao, K., & Tsai, S. (2011) · The Journal of Pathology · doi:10.1002/path.2963 · Cited by 65 · see citing works
Self-citationForte, A., Cipollaro, M., & Galderisi, U. (2013) · Clinical Science · doi:10.1042/cs20130099 · Cited by 63 · see citing works
Ischemia dysregulates DNA methyltransferases andp16INK4amethylation in human colorectal cancer cells
Skowronski, K., Dubey, S., Rodenhiser, D. I., & Coomber, B. L. (2010) · Epigenetics · doi:10.4161/epi.5.6.12400 · Cited by 56 · see citing works
Hsiao, K., Chang, N., Lin, S., Li, Y.-H., & Wu, M. (2014) · Human Reproduction · doi:10.1093/humrep/deu255 · Cited by 55 · see citing works
Self-citationCombinatorial mRNA binding by AUF1 and Argonaute 2 controls decay of selected target mRNAs
Wu, X., Chesoni, S., Rondeau, G., Tempesta, C., Patel, R., Charles, S., Daginawala, N., Zucconi, B. E., Kishor, A., Xu, G., et al. (2013) · Nucleic Acids Research · doi:10.1093/nar/gks1453 · Cited by 41 · see citing works
Senthong, A.-J., Kitkumthorn, N., Rattanatanyong, P., Khemapech, N., Triratanachart, S., & Mutirangura, A. (2013) · International Journal of Gynecological Cancer · doi:10.1097/igc.0000000000000021 · Cited by 39 · see citing works
Hori, M., Iwasaki, M., Shimazaki, J., et al. (2000) · Gynecologic Oncology · doi:10.1006/gyno.1999.5662 · Cited by 31 · see citing works
AUF1 p42 isoform selectively controls both steady-state and PGE2-induced FGF9 mRNA decay
Chen, T.-M., Hsu, C.-H., Tsai, S., & Sun, H. S. (2010) · Nucleic Acids Research · doi:10.1093/nar/gkq717 · Cited by 28 · see citing works
Self-citationKai, K., Nasu, K., Kawano, Y., Aoyagi, Y., Tsukamoto, Y., Hijiya, N., Abe, W., Okamoto, M., Moriyama, M., & Narahara, H. (2013) · American Journal of Reproductive Immunology · doi:10.1111/aji.12155 · Cited by 14 · see citing works
Flagged first, then by citations
Research works printed but not linked: 3
- Chang N, Yi J, Guo G, Liu X, Shang Y, Tong T, Cui Q, Zhan M, Gorospe M, Wang W. HuR uses AUF1 as a cofactor to promote p16INK4 mRNA decay. Mol Cell Biol 2010;30:3875 -3886.
- Kai K, Nasu K, Kawano Y, Aoyagi Y, Tsukamoto Y, Hijiya N, Abe W, Okamoto M, Moriyama M, Narahara H. Death receptor 6 is epigenetically silenced by histone deacetylation in endometriosis and promotes the pathogenesis of endometriosis. Am J Reprod Immunol 2013;70:485 -496.
- Wu MH, Lu CW, Chuang PC, Tsai SJ. Prostaglandin E2: the master of endometriosis? Exp Biol Med (Maywood) 2010;235:668 -677.
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Yilmaz, B. D., & Bulun, S. E. (2019) · Human Reproduction Update · doi:10.1093/humupd/dmz005 · Cited by 243 · see citing works
DNA methylation in endometriosis (Review)
KOUKOURA, O., SIFAKIS, S., & SPANDIDOS, D. A. (2016) · Molecular Medicine Reports · doi:10.3892/mmr.2016.4925 · Cited by 103 · see citing works
Hypoxia: The force of endometriosis
Wu, M., Hsiao, K., & Tsai, S. (2019) · Journal of Obstetrics and Gynaecology Research · doi:10.1111/jog.13900 · Cited by 88 · see citing works
Self-citation
- Authors
- Hsiao, K.-Y., Wu, M.-H., Chang, N., Yang, S.-H., Wu, C.-W., Sun, H. S., & Tsai, S.-J.
- Affiliations
- National Cheng Kung University (TW)
- Corresponding author
- Sun, H. Sunny
- Tsai, Shaw-Jenq
- ORCID
- Venue
- Molecular Human Reproduction
- Publisher
- Oxford University Press (OUP)
- Published
- 2015-10-03
- Volume
- 21
- Issue
- 12
- Pages
- 894-904
- ISSN
- 1360-9947 (ISSN-L)
- 1460-2407
- OpenAlex
- W2189249738
- Cited by
- 64
- References
- 39
- Citations by year
- 2026: 1 · 2025: 9 · 2024: 5 · 2023: 6 · 2022: 4 · 2021: 7 · 2020: 7 · 2019: 8 · 2018: 5 · 2017: 7 · 2016: 5
- FWCI
- 6.46
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Molecular Human Reproduction (publishedVersion)
- PubMed (publishedVersion)
- Funders
- National Science Council of Taiwan (NSC101-2320-B-006-030-MY3)
- Topics
- Health Sciences › Medicine › Reproductive Medicine › Endometriosis Research and Treatment
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Epigenetics and DNA Methylation
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cancer Research › MicroRNA in disease regulation
- Keywords
- endometriosis, hypoxia, DNA methylation, DNMT1, AUF1, HuR, miR-148a, mRNA stability, AU-rich elements, 5-methylcytosine, endometrial stromal cells, hypoxia mimetics
- MeSH terms
- Heterogeneous Nuclear Ribonucleoprotein D0, Animals, Cell Line, Endometriosis, Female, Immunohistochemistry, RNA, Messenger, Blotting, Western, DNA Methylation, Reverse Transcriptase Polymerase Chain Reaction, Heterogeneous-Nuclear Ribonucleoprotein D, MicroRNAs, Epigenesis, Genetic, Immunoprecipitation, Mice
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