Accuracy and calibration of commercial oligonucleotide and custom cDNA microarrays
Yuen, T.·2002·Nucleic Acids Research
Cited by (520)
Items 101–200 of 520
- Global gene expression analyses of bystander and alpha particle irradiated normal human lung fibroblasts: Synchronous and differential responsesShanaz A. Ghandhi, Benjamin Yaghoubian, Sally A. Amundson · 2008 · BMC Medical Genomics
- De-regulation of common housekeeping genes in hepatocellular carcinomaSamuel Waxman, Elisa Wurmbach · 2007 · BMC Genomics
- The NS1 Protein of a Human Influenza Virus Inhibits Type I Interferon Production and the Induction of Antiviral Responses in Primary Human Dendritic and Respiratory Epithelial CellsKester Haye, Svetlana Burmakina, Thomas M. Moran, Adolfo García‐Sastre, Ana Fernández-Sesma · 2009 · Journal of Virology
- Gene expression signature of primary imatinib-resistant chronic myeloid leukemia patientsOliver Frank, Benedikt Brors, Alice Charlotte Fabarius, L Li, Markus Haak, Sylvia Merk, Uwe Schwindel, C Zheng, M C Müller, N. Gretz et al. · 2006 · Leukemia
- A generally applicable validation scheme for the assessment of factors involved in reproducibility and quality of DNA-microarray dataSacha A. F. T. van Hijum, Anne de Jong, Richard J. S. Baerends, Harma A. Karsens, Naomi E. Kramer, Rasmus Larsen, Chris D. den Hengst, Casper Johannes Albers, Jan Kok, Oscar Paul Kuipers · 2005 · BMC Genomics
- Three microarray platforms: an analysis of their concordance in profiling gene expressionDavid W. Petersen, GVR Chandramouli, Joel M. Geoghegan, Joanne Hilburn, Jonathon Paarlberg, Chang Hee Kim, David J. Munroe, Lisa Gangi, Jing Han, Raj K. Puri et al. · 2005 · BMC Genomics
- Biphasic Modulation of Apoptotic Pathways in Cryptosporidium parvum -Infected Human Intestinal Epithelial CellsJin Liu, Mingqi Deng, Cheryl A. Lancto, Mitchell S. Abrahamsen, Mark S. Rutherford, Shinichiro Enomoto · 2008 · Infection and Immunity
- Signatures of human regulatory T cells: an encounter with old friends and new playersSusanne Pfoertner, Andreas Jeron, Michael Probst‐Kepper, Carlos A. Guzmán, Wiebke Hansen, Astrid Maria Westendorf, Tanja Toepfer, Andres Jan Schrader, Anke Franzke, Jan Buer et al. · 2006 · Genome biology
- Controlling false-negative errors in microarray differential expression analysis: a PRIM approachSteve W. Cole, Zoran Galić, Jerome A. Zack · 2003 · Bioinformatics
- Identifying Superficial, Muscle-Invasive, and Metastasizing Transitional Cell Carcinoma of the BladderOlga Modlich, Hans-Bernd Prisack, Gerald Pitschke, Uwe Ramp, Rolf Ackermann, Hans Bojar, Thomas Alexander Vögeli, Marc‐Oliver Grimm · 2004 · Clinical Cancer Research
- Integration of Ranked Lists via Cross Entropy Monte Carlo with Applications to mRNA and microRNA StudiesShili Lin, Jie Ding · 2008 · Biometrics
- Loss of Vacuolar Proton-translocating ATPase Activity in Yeast Results in Chronic Oxidative StressElena M. Milgrom, Heba I. Diab, Frank A. Middleton, Patricia M. Kane · 2007 · Journal of Biological Chemistry
- Genome-Wide Analysis on Inbreeding Effects on Gene Expression in Drosophila melanogasterTorsten Nygaard Kristensen, Peter Borgen Sørensen, Mogens Kruhøffer, Kamilla Sofie Pedersen, Volker Loeschcke · 2005 · Genetics
- Current issues for DNA microarrays: platform comparison, double linear amplification, and universal RNA referencePeter J. Park, Yun Anna Cao, Sun Young Lee, Jongwoo Kim, Mi Sook Chang, Rebecca Hart, Sangdun Choi · 2004 · Journal of Biotechnology
- QA/QC: challenges and pitfalls facing the microarray community and regulatory agenciesLeming M. Shi, Weida Tong, Federico M. Goodsaid, Felix W. Frueh, Hong Fang, Tao Han, James C. Fuscoe, Daniel A. Casciano · 2004 · Expert Review of Molecular Diagnostics
- Freshly isolated rat alveolar type I cells, type II cells, and cultured type II cells have distinct molecular phenotypesRobert F. Gonzalez, Yee Hwa Yang, Chandi A Griffin, Lennell Allen, Zachary Tigue, Leland G. Dobbs · 2004 · American Journal of Physiology-Lung Cellular and Molecular Physiology
- Capsid Protein of Eastern Equine Encephalitis Virus Inhibits Host Cell Gene ExpressionPatricia V. Aguilar, Scott C. Weaver, Christopher F. Basler · 2007 · Journal of Virology
- Identification of Gene Expression Changes Associated with the Progression of Retinal Degeneration in the rd1 MouseAbigail S. Hackam, Richelle C. Strom, Dongmei Liu, Jiang Qian, Chenwei Wang, Deborah C. Otteson, Tushara L. Gunatilaka, Ronald H. Farkas, Itay Chowers, Masaaki Kageyama et al. · 2004 · Investigative Ophthalmology & Visual Science
- Differential expression of GADD45β in normal and osteoarthritic cartilage: Potential role in homeostasis of articular chondrocytesKosei Ijiri, Luiz Fernando Zerbini, Haibing Peng, Hasan H. Otu, Kaneyuki Tsuchimochi, Miguel Otero, Cecilia L. Dragomir, Nicole C. Walsh, Benjamin E. Bierbaum, David Mattingly et al. · 2008 · Arthritis & Rheumatism
- Physiological Genomics of Human ArteriesSéverine Durier, Céline Fassot, Stéphane Laurent, Pierre Boutouyrie, Jean-Paul Couëtil, Erika Fine, Patrick J. Lacolley, Victor J. Dzau, Richard E. Pratt · 2003 · Circulation
- Analysis of differential gene expression in human melanocytic tumour lesions by custom made oligonucleotide arraysNicole J. W. de Wit, Jos Rijntjes, J H S Diepstra, Toin H. Van Kuppevelt, Ulrich H. Weidle, D. J. Ruiter, Goos N.P. van Muijen · 2005 · British Journal of Cancer
- Quantitative X-ray Photoelectron Spectroscopy and Time-of-Flight Secondary Ion Mass Spectrometry Characterization of the Components in DNACollin J. May, Heather E. Canavan, David G. Castner · 2004 · Analytical Chemistry
- Methods for Transcriptional Profiling in Plants. Be Fruitful and ReplicateBlake C. Meyers, David W. Galbraith, Timothy Mark Nelson, Vikas Agrawal · 2004 · PLANT PHYSIOLOGY
- Multiple dysregulated pathways in nasopharyngeal carcinoma revealed by gene expression profilingWei Shi, Carlo Bastianutto, Anna Li, Bayardo Perez‐Ordoñez, Raymond W. M. Ng, Kan‐Yan Chow, Wendy Zhang, Igor Jurišica, Kwok Wai Lo, Andrew Bayley et al. · 2006 · International Journal of Cancer
- Benchmarking the CATMA Microarray. A Novel Tool forArabidopsis Transcriptome AnalysisJoke Allemeersch, Steffen Durinck, Rudy Vanderhaeghen, Philippe Alard, Ruth Maes, Kurt Seeuws, Tom Van Bogaert, Kathleen Coddens, Kirsten Deschouwer, Paul Van Hummelen et al. · 2005 · PLANT PHYSIOLOGY
- Microarray Analysis of Mouse Brain Gene Expression Following Acute Ethanol TreatmentJulie A. Treadwell, Shiva M. Singh · 2004 · Neurochemical Research
- Transcriptional analysis of Pinus sylvestris roots challenged with the ectomycorrhizal fungus Laccaria bicolorGregory Heller, Aleksandra B. Adomas, Guosheng Li, Jason A. Osborne, Len van Zyl, Ron Sederoff, Roger D. Finlay, Jan Stenlid, Fred O. Asiegbu · 2008 · BMC Plant Biology
- Microarray analysis of the transcriptome as a stepping stone towards understanding biological systems: practical considerations and perspectivesJoseph D. Clarke, Tong Zhu · 2006 · The Plant Journal
- Early Single Cell Bifurcation of Pro- and Antiapoptotic States during Oxidative StressVenugopalan D. Nair, Tony Yuen, C. Warren Olanow, Stuart C. Sealfon · 2004 · Journal of Biological Chemistry
- Gene Expression of Metabolic Enzymes and a Protease Inhibitor in the Prefrontal Cortex Are Decreased in SchizophreniaMarquis P. Vawter, Cynthia Shannon Weickert, Erick Ferran, Mitsuyuki Matsumoto, Kevin Overman, Thomas M. Hyde, Daniel R. Weinberger, William E. Bunney, Joel E. Kleinman · 2004 · Neurochemical Research
- Transcriptomic analysis of responses to exudates reveal genes required for rhizosphere competence of the endophyte Azoarcus sp. strain BH72Teja Shidore, Theresa Dinse, Johannes Öhrlein, Anke Becker, Barbara Reinhold‐Hurek · 2012 · Environmental Microbiology
- Structure of the GnRH receptor-stimulated signaling network: insights from genomicsFrederique Murielle Ruf-Zamojski, Marc Y. Fink, Stuart C. Sealfon · 2003 · Frontiers in Neuroendocrinology
- An mTORC1-Mdm2-Drosha Axis for miRNA Biogenesis in Response to Glucose- and Amino Acid-DeprivationPeiying Ye, Yu Liu, Chong Chen, Fei Tang, Qi Wu, Xiang Wang, Chang-Gong Liu, Xiuping Liu, Runhua Liu, Yang Liu et al. · 2015 · Molecular Cell
- In Utero Exposure to Diethylhexyl Phthalate Affects Rat Brain Development: A Behavioral and Genomic ApproachHan Lin, Kaiming Yuan, Linyan Li, Shiwen Liu, Senlin Li, Guoxin Hu, Qingquan Lian, Ren‐Shan Ge · 2015 · International Journal of Environmental Research and Public Health
- Antiinflammatory Effects of the ETS Factor ERG in Endothelial Cells Are Mediated Through Transcriptional Repression of the Interleukin-8 GeneLei Yuan, Vesna Nikolova-Krstevski, Yumei Zhan, Maiko Kondo, Manoj Bhasin, Laya Varghese, Kiichiro Yano, Christopher V. Carman, William C. Aird, Peter Oettgen · 2009 · Circulation Research
- Global gene expression profiles of human head and neck squamous carcinoma cell linesGeoung A. Jeon, Ju‐Seog Lee, Vyomesh Patel, Jorge Silvio Gutkind, Snorri S. Thorgeirsson, Eun Cheol Kim, In‐Sun Chu, Panomwat Amornphimoltham, Myung Hee Park · 2004 · International Journal of Cancer
- Genome Wide Host Gene Expression Analysis in Chicken Lungs Infected with Avian Influenza VirusesPradip B. Ranaware, Anamika Mishra, Periyasamy Vijayakumar, Pradeep Narayan Gandhale, Himanshu Kumar, Diwakar D. Kulkarni, Ashwin Ashok Raut · 2016 · PLoS ONE
- Effect of ageing on pulmonary inflammation, airway hyperresponsiveness and T and B cell responses in antigen‐sensitized and ‐challenged micePaula Jane Busse, Teng Fei Zhang, Kamal D Srivastava, Brian Schofield, Xiu-Min Li · 2007 · Clinical & Experimental Allergy
- Ebola Virion Attachment and Entry into Human Macrophages Profoundly Effects Early Cellular Gene ExpressionVictoria Wahl‐Jensen, Sabine K. Kurz, Friedericke Feldmann, Lukas K. Buehler, Jason Kindrachuk, Victor R. DeFilippis, Jean da Silva Correia, Klaus Früh, Jens H. Kuhn, Dennis R. Burton et al. · 2011 · PLoS neglected tropical diseases
- Changes in global gene and protein expression during early mouse liver carcinogenesis induced by non-genotoxic model carcinogens oxazepam and Wyeth-14,643Mari Iida · 2003 · Carcinogenesis
- Laser capture microdissection-based in vivo genomic profiling of wound keratinocytes identifies similarities and differences to squamous cell carcinomaTanja Xenia Pedersen, Chidchanop Leethanakul, Vyomesh Patel, David J. Mitola, Leif R. Lund, Keld Danø, Morten Johnsen, Jorge Silvio Gutkind, Thomas Henrik Bugge · 2003 · Oncogene
- Transcript profiling of a conifer pathosystem: response of Pinus sylvestris root tissues to pathogen (Heterobasidion annosum) invasionAleksandra B. Adomas, Gregory Heller, Guosheng Li, Åke Olson, Tzu‐Ming Chu, Jason A. Osborne, Deborah Craig, L. van Zyl, Russell D. Wolfinger, Ron Sederoff et al. · 2007 · Tree Physiology
- Effect of infliximab on mRNA expression profiles in synovial tissue of rheumatoid arthritis patientsJohan Lindberg, Erik af Klint, Anca I. Catrina, Peter Nilsson, Lars Klareskog, Ann‐Kristin Ulfgren, Joakim Lundeberg · 2006 · Arthritis Research & Therapy
- Identification of woolliness response genes in peach fruit after post-harvest treatmentsMauricio González-Agüero, Leonardo Pavéz, Freddy Ibanez-Carrasco, Igor Pacheco, Reinaldo Campos‐Vargas, Lee Ann Meisel, Ariel Orellana, J. Retamales, Hermán Silva, Maurício González et al. · 2008 · Journal of Experimental Botany
- Robotic spotting of cDNA and oligonucleotide microarraysRichard P. Auburn, David Philip Kreil, Lisa A. Meadows, Bettina Fischer, Santiago Sevillano Matilla, Steven R. H. Russell · 2005 · Trends in biotechnology
- Gene expression profiling in the neuroendocrine brain of male goldfish (Carassius auratus) exposed to 17α-ethinylestradiolChristopher Joseph Martyniuk, Huiling Xiong, Kate L. Crump, Suzanne Chiu, Ravinder K. Sardana, Ashlie Nadler, Emily R. Gerrie, Xuhua Xia, Vance Lionel Trudeau · 2006 · Physiological Genomics
- Transcriptomic Assessment of Isozymes in the Biphenyl Pathway of Rhodococcus sp. Strain RHA1Edmilson Ricardo Gonçalves, Hirofumi Hara, Daisuke Miyazawa, JULIAN E. DAVIES, Lindsay D. Eltis, William W. Mohn · 2006 · Applied and Environmental Microbiology
- Review of the literature examining the correlation among DNA microarray technologiesCarole Lyn Yauk, M. Lynn Berndt · 2007 · Environmental and Molecular Mutagenesis
- Focused microarray analysisElisa Wurmbach, Tony Yuen, Stuart C. Sealfon · 2003 · Methods
- Construction and Validation of the Rhodobacter sphaeroides 2.4.1 DNA Microarray: Transcriptome Flexibility at Diverse Growth ModesChristopher T. Pappas, Jakub P. Sram, Oleg Vladimirovich Moskvin, Pavel S. Ivanov, R. C. Mackenzie, Madhusudan Choudhary, Miriam Land, Frank W. Larimer, Samuel Kaplan, Mark Gomelsky · 2004 · Journal of Bacteriology
- Chronic exposure to TNF-α increases airway mucus gene expression in vivoPaula Jane Busse, Teng Zhang, Kamal D Srivastava, Bernard P. Lin, Brian Schofield, Stuart C. Sealfon, X LI · 2005 · Journal of Allergy and Clinical Immunology
- Over-Expression of a Cytochrome P450 Is Associated with Resistance to Pyriproxyfen in the Greenhouse Whitefly Trialeurodes vaporariorumNikos Karatolos, Martin S. Williamson, I. Denholm, Kevin J. Gorman, Richard H. ffrench‐Constant, Chris Bass · 2012 · PLoS ONE
- Comparative analysis of transcript abundance in Pinus sylvestris after challenge with a saprotrophic, pathogenic or mutualistic fungusAleksandra B. Adomas, Gregory Heller, Åke Olson, Jason A. Osborne, Magnus Karlsson, Jarmila Nahálková, Len van Zyl, Ron Sederoff, Jan Stenlid, Roger D. Finlay et al. · 2008 · Tree Physiology
- Chemical inhibition of RNA viruses reveals REDD1 as a host defense factorMiguel A. Mata, Neal Satterly, Gijs A. Versteeg, Doug E. Frantz, Shuguang Wei, Noelle Sevilir Williams, Mirco Schmolke, Samuel Peña‐Llopis, James Brugarolas, Christian V. Forst et al. · 2011 · Nature Chemical Biology
- Transcriptome profiling of lung schistosomula,in vitro cultured schistosomula and adult Schistosoma japonicumMitta Chai, Donald Peter McManus, Russell L. McInnes, Luke Moertel, Mai Hue Tran, Alex C. Loukas, Malcolm K. Jones, Geoffrey N. Gobert · 2006 · Cellular and Molecular Life Sciences
- Evaluation of the similarity of gene expression data estimated with SAGE and Affymetrix GeneChipsFred van Ruissen, Jan M. Ruijter, Gerben Schaaf, Lida Asgharnegad, Danny A. Zwijnenburg, Marcel Kool, Frank Baas · 2005 · BMC Genomics
- Deciphering transcriptional networks that govern Coffea arabica seed development using combined cDNA array and real-time RT-PCR approachesJordi Salmona, Stéphane Dussert, Frédéric Descroix, Alexandre de Kochko, Benoît Bertrand, Thierry Joët · 2007 · Plant Molecular Biology
- Host Transcription Profiles upon Primary Respiratory Syncytial Virus InfectionRiny Janssen, Jeroen L. A. Pennings, Hennie M. Hodemaekers, Anne‐Marie Buisman, Marijke van Oosten, Lia de Rond, Kemal Öztürk, Jan A. M. A. Dormans, Tjeerd G. Kimman, Barbara Hoebee · 2007 · Journal of Virology
- In control: systematic assessment of microarray performanceHarm van Bakel, Frank C. P. Holstege · 2004 · EMBO Reports
- DNA microarray analysis of gene expression in human optic nerve head astrocytes in response to hydrostatic pressurePing Yang, Olga A. Agapova, Amy Parker, William D. Shannon, Paula E. Pecen, Jill Duncan, Mercedes Salvador‐Silva, M. Rosario Hernandez · 2004 · Physiological Genomics
- Transcriptome Analysis of the Rhodobacter sphaeroides PpsR Regulon: PpsR as a Master Regulator of Photosystem DevelopmentOleg Vladimirovich Moskvin, Larissa Gomelsky, Mark Gomelsky · 2005 · Journal of Bacteriology
- Activation of Type I and III Interferon Signalling Pathways Occurs in Lung Epithelial Cells Infected with Low Pathogenic Avian Influenza VirusesRichard Sutejo, Dawn Su-Yin Yeo, Myint Zu Myaing, Hui Chen, Jiajia Xia, Debbie Ko, Peter Cheung, Boon Huan Tan, Richard J. Sugrue · 2012 · PLoS ONE
- Expression Profiling Identifies Genes That Continue to Respond to Insulin in Adipocytes Made Insulin-resistant by Treatment with Tumor Necrosis Factor-αPeter Sartipy, David J. Loskutoff · 2003 · Journal of Biological Chemistry
- A study of inter-lab and inter-platform agreement of DNA microarray dataHUIXIA JUDY WANG, Xuming He, Mark Band, Carole Wilson, Lei Liu · 2005 · BMC Genomics
- Sensitivity of 70‐mer oligonucleotides and cDNAs for microarray analysis of gene expression in Arabidopsis and its related speciesHyeon-Se Lee, Jianlin Wang, Lu Tian, Hongmei Jiang, Michael A. Black, Andreas Madlung, Brian Watson, LEWIS N. LUKENS, J. Chris Pires, Jiyuan J. Wang et al. · 2003 · Plant Biotechnology Journal
- Microfluidic platform combining droplets and magnetic tweezers: application to HER2 expression in cancer diagnosisDavide Ferraro, Jérôme Champ, Bruno Teste, Marco Serra, Laurent Malaquin, Jean‐Louis Viovy, Patricia de Crémoux, Stéphanie Descroix · 2016 · Scientific Reports
- Enhanced identification and biological validation of differential gene expression via Illumina whole-genome expression arrays through the use of the model-based background correction methodologyLiang-Hao Ding, Yang Xie, Seongmi Park, Guanghua Xiao, Michael D. Story · 2008 · Nucleic Acids Research
- Anabolic actions of Notch on mature bonePeng Liu, Yilin Ping, Meng Ma, Demao Zhang, Connie S. Liu, Samir Zaidi, Song Gao, Yaoting Ji, Feng Lou, Fanyuan Yu et al. · 2016 · Proceedings of the National Academy of Sciences
- Cytoskeletal Rearrangements in Synovial Fibroblasts as a Novel Pathophysiological Determinant of Modeled Rheumatoid ArthritisVassilis Aidinis, Piero Carninci, Marietta Armaka, Walter Witke, Vaggelis Harokopos, Norman Pavelka, Dirk Koczan, Christos Argyropoulos, M.M. Thwin, Steffen Möller et al. · 2005 · PLoS Genetics
- Genes commonly upregulated by hypoxia in human breast cancer cells MCF-7 and MDA-MB-231Hiroko Bando, Masakazu Toi, Kunio Kitada, Morio Koike · 2003 · Biomedicine & Pharmacotherapy
- DNA microarray and cancerQingbin M. Guo · 2003 · Current Opinion in Oncology
- Comparison of microarray-based mRNA profiling technologies for identification of psychiatric disease and drug signaturesLinda W. Jurata, Yury V. Bukhman, Vinod Charles, Frank Capriglione, Jeffrey Bullard, Andrew L. Lemire, Ali Mohammed, Quyen Pham, Pascal Laeng, Jeffrey A. Brockman et al. · 2004 · Journal of Neuroscience Methods
- Bioinformatic identification and characterization of human endothelial cell-restricted genesManoj Bhasin, Lei Yuan, Derin B. Keskin, Hasan H. Otu, Towia A. Libermann, Peter Oettgen · 2010 · BMC Genomics
- PIWI-interacting RNA (piRNA) signatures in human cardiac progenitor cellsSerena Vella, Alessia Gallo, Antonio Lo Nigro, Daniele Galvagno, Giuseppe Maria Raffa, Michele Pilato, Pier Giulio Conaldi · 2016 · The International Journal of Biochemistry & Cell Biology
- Responses of the Rhodobacter sphaeroides Transcriptome to Blue Light under Semiaerobic ConditionsStephan Braatsch, Oleg Vladimirovich Moskvin, Gabriele Klug, Mark Gomelsky · 2004 · Journal of Bacteriology
- Cross-study validation and combined analysis of gene expression microarray dataElizabeth S. Garrett-Mayer, Giovanni Parmigiani, Xiaogang Zhong, Leslie Cope, Edward W. Gabrielson · 2007 · Biostatistics
- Osmolarity Regulates Gene Expression in Intervertebral Disc Cells Determined by Gene Array and Real-Time Quantitative RT-PCRLawrence M. Boyd, William J. Richardson, Jun Chen, Virginia B. Kraus, Alok K. Tewari, Lori A. Setton · 2005 · Annals of Biomedical Engineering
- Alpha 1-antitrypsin reduces inflammation and enhances mouse pancreatic islet transplant survivalMaria Koulmanda, Manoj Bhasin, Zhigang Fan, Dusan Hanidziar, Nipun Goel, Prabhakar Putheti, Babak Movahedi, Towia A. Libermann, Terry B. Strom · 2012 · Proceedings of the National Academy of Sciences
- Widespread Distribution of Soluble Di-Iron Monooxygenase (SDIMO) Genes in Arctic Groundwater Impacted by 1,4-DioxaneMengyan Li, Jacques Mathieu, Yu Yang, Stephanie Fiorenza, Ye Deng, Zhili He, Jizhong Z. Zhou, Pedro J. J. Alvarez · 2013 · Environmental Science & Technology
- Patient-based cross-platform comparison of oligonucleotide microarray expression profilesJoerg Schlingemann, Negusse Habtemichael, Carina Ittrich, Grischa Toedt, Heidi Kramer, Markus Hambek, Rainald Knecht, Peter Lichter, Roland H. Stauber, Meinhard Hahn · 2005 · Laboratory Investigation
- Genome-Wide Analysis of Light Sensing inProchlorococcusClaudia Steglich, Matthias Erwin Futschik, Trent L. Rector, Robert Steen, Sallie W. Chisholm · 2006 · Journal of Bacteriology
- Characterization of theEscherichia coliO157:H7 Sakai GadE RegulonSivapriya Kailasan Vanaja, Teresa M. Bergholz, Thomas S. Whittam · 2008 · Journal of Bacteriology
- Differential Gene Expression at Coral Settlement and Metamorphosis - A Subtractive Hybridization StudyDavid C. Hayward, Suzannah Hetherington, Carolyn A. Behm, Lauretta C. Grasso, Sylvain Forêt, David John Miller, Eldon E. Ball · 2011 · PLoS ONE
- A Novel Pathway Involving Melanoma Differentiation Associated Gene-7/Interleukin-24 Mediates Nonsteroidal Anti-inflammatory Drug–Induced Apoptosis and Growth Arrest of Cancer CellsLuiz Fernando Zerbini, Akos Gabor Czibere, Yihong Wang, Ricardo G. Correa, Hasan H. Otu, Marie G. Joseph, Yuko Takayasu, Moriah Silver, Xuesong Gu, Kriangsak Ruchusatsawat et al. · 2006 · Cancer Research
- DNA microarrays: translation of the genome from laboratory to clinicDaniel H. Geschwind · 2003 · The Lancet Neurology
- Identification of methods for use of formalin-fixed, paraffin-embedded tissue samples in RNA expression profilingLisa Roberts, Jessica Bowers, Kelly Sensinger, Andrew Lisowski, Robert C. Getts, Mark G. Anderson · 2009 · Genomics
- Global gene expression profiling of formalin-fixed paraffin-embedded tumor samples: a comparison to snap-frozen material using oligonucleotide microarraysMatthias Frank, Claudia Döring, Dirk Metzler, Susan Eckerle, Martin‐Leo Hansmann · 2007 · Archiv für Pathologische Anatomie und Physiologie und für Klinische Medicin
- Oligodeoxyribonucleotide probe accessibility on a three-dimensional DNA microarray surface and the effect of hybridization time on the accuracy of expression ratiosDavid R. Dorris, Allen Nguyen, Linn M. Gieser, Randall Lockner, Anna Lublinsky, Marcus Patterson, Edward Touma, Timothy J. Sendera, Robert Elghanian, Abhijit Mazumder · 2003 · BMC Biotechnology
- Characterization of clear cell renal cell carcinoma by gene expression profilingBryan J. Thibodeau, Matthew Fulton, Laura E. Fortier, Timothy J. Geddes, Barbara L. Pruetz, Samreen I. Ahmed, Amy K. L. Banes‐Berceli, Ping L. Zhang, George David Wilson, Jason M. Hafron · 2015 · Urologic Oncology Seminars and Original Investigations
- Transcriptomic Identification of Iron-Regulated and Iron-Independent Gene Copies within the Heavily Duplicated Trichomonas vaginalis GenomeLenka Horváthová, Lucie Šafaříková, Marek Basler, Ivan Hrdý, Neritza Campo Beltrán, Jyh-Wei Shin, Kuo‐Yang Huang, Po-Jung Huang, Rose Lin, Petrus Tang et al. · 2012 · Genome Biology and Evolution
- Unique patterns of gene expression changes in liver after treatment of mice for 2 weeks with different known carcinogens and non-carcinogensMari Iida, Colleen H. Anna, Wanda M. Holliday, Jennifer B. Collins, Michael L. Cunningham, Robert C. Sills, Theodora R. Devereux · 2004 · Carcinogenesis
- Skeletal muscle gene expression profiling in mitochondrial disordersCrimi, Marco, Bordoni, Andreina, Menozzi, Giorgia, Riva, Laura, Fortunate, Francesco, Galbiati, Sara, Del Bo, Roberto, Pozzoli, Uberto, Bresolin, Nereo, Comi, Giacomo Pietro · 2005 · The FASEB Journal
- In vivo – in vitro toxicogenomic comparison of TCDD-elicited gene expression in Hepa1c1c7 mouse hepatoma cells and C57BL/6 hepatic tissueEdward Dere, Darrell R. Boverhof, Lyle D. Burgoon, Timothy Richard Zacharewski · 2006 · BMC Genomics
- Bone morphogenetic protein 2 and activin A synergistically stimulate follicle-stimulating hormone β subunit transcriptionKatharine B Lee, Vishal Khivansara, Michelle M Santos, Pankaj Lamba, Tony Yuen, Stuart C. Sealfon, Daniel J. Bernard · 2007 · Journal of Molecular Endocrinology
- Regional variations in ABC transporter expression along the mouse intestinal tractDavid M. Mutch, Pascale Anderle, Muriel Fiaux, Robert Mansourian, Karine Vidal, Walter Wahli, Gary Williamson, Matthew-Alan Roberts · 2004 · Physiological Genomics
- Identification of Novel Genes Preferentially Expressed in the Retina Using a Custom Human Retina cDNA MicroarrayItay Chowers, Tushara L. Gunatilaka, Ronald H. Farkas, Jiang Qian, Abigail S. Hackam, Elia J. Duh, Masaaki Kageyama, Chenwei Wang, Amit N. Vora, Peter A. Campochiaro et al. · 2003 · Investigative Ophthalmology & Visual Science
- Signaling and Transcriptional Changes Critical for Transformation of Human Cells by Simian Virus 40 Small Tumor Antigen or Protein Phosphatase 2A B56γ KnockdownCarlos S. Moreno, Sumathi Ramachandran, Danita G. Ashby, Noelani Laycock, Courtney A. Plattner, Wen Chen, William C. Hahn, David C. Pallas · 2004 · Cancer Research
- Standardization of protocols in cDNA microarray analysisVladimı́r Beneš, Martina Ulrike Muckenthaler · 2003 · Trends in Biochemical Sciences
- Transcriptomic Analysis Identifies Growth Rate Modulation as a Component of the Adaptation of Mycobacteria to Survival inside the MacrophageBeste, D. J. V., Laing, E., Bonde, B., Avignone-Rossa, C., Bushell, M. E., McFadden, J. J. · 2007 · Journal of Bacteriology
- Comprehensive Detection and Identification of Seven Animal Coronaviruses and Human Respiratory Coronavirus 229E with a Microarray Hybridization AssayQin Chen, Jian Li, Zhirui Deng, Wei Guo Xiong, Quan Wang, Yong-Qiang Hu · 2009 · Intervirology