The DOI matches its Crossref record; 2 of the 2 references it cites were found in a registry or an index.
Recent improvements to the PROSITE database
Open accessAbstract
The PROSITE database consists of a large collection of biologically meaningful signatures that are described as patterns or profiles. Each signature is linked to documentation that provides useful biological information on the protein family, domain or functional site identified by the signature. The PROSITE web page has been redesigned and several tools have been implemented to help the user discover new conserved regions in their own proteins and to visualize domain arrangements. We also introduced the facility to search PDB with a PROSITE entry or a user's pattern and visualize matched positions on 3D structures. The latest version of PROSITE (release 18.17 of November 30, 2003) contains 1676 entries. The database is accessible at http://www.expasy.org/prosite/.
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Citations
Cites
Protein Structure Comparison by Alignment of Distance Matrices
Holm, L., & Sander, C. (1993) · Journal of Molecular Biology · doi:10.1006/jmbi.1993.1489 · Cited by 3,984 · cited 1×
“Several of our profiles have been built by a mixture of classical alignment and structural alignment with the help of T-Coffee or by pure structural alignment provided by the DALI algorithm (11).”
MethodPROSITE: a documented database using patterns and profiles as motif descriptors
Sigrist, C. J. A. (2002) · Briefings in Bioinformatics · doi:10.1093/bib/3.3.265 · Cited by 913 · cited 1×
“The PROSITE database uses two kinds of descriptor to identify conserved regions, patterns and generalized profiles, which each have their own strengths and weaknesses defining their area of optimum application ( 1 ).”
Method
Cited by
The Universal Protein Resource (UniProt)
Bairoch, A. (2004) · Nucleic Acids Research · doi:10.1093/nar/gki070 · Cited by 3,774
de Castro, E., Sigrist, C. J. A., Gattiker, A., Bulliard, V., Langendijk-Genevaux, P. S., Gasteiger, E., Bairoch, A., & Hulo, N. (2006) · Nucleic Acids Research · doi:10.1093/nar/gkl124 · Cited by 1,686
Self-citationCarles, C. C., Choffnes-Inada, D., Reville, K., Lertpiriyapong, K., & Fletcher, J. C. (2005) · Development · doi:10.1242/dev.01642 · Cited by 128
High Molecular Weight Kininogen: A Review of the Structural Literature
Ponczek, M. B. (2021) · International Journal of Molecular Sciences · doi:10.3390/ijms222413370 · Cited by 45
Predicting post-synaptic activity in proteins with data mining
Pappa, G. L., Baines, A. J., & Freitas, A. A. (2005) · Bioinformatics · doi:10.1093/bioinformatics/bti1102 · Cited by 20
Metadata
- Authors
- Hulo, N.
- Venue
- Nucleic Acids Research
- Publisher
- Oxford University Press (OUP)
- Published
- 2004-01-01
- Volume
- 32
- Issue
- 90001
- Pages
- 134D-137
- ISSN
- 0305-1048 (ISSN-L)
- 1362-4962
- OpenAlex
- W2126975650
- Cited by
- 415
- References
- 2
- FWCI
- 26.38
- Type
- journal article
- Language
- en
- Open access
- bronze
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