The DOI matches its Crossref record; 3 of the 3 references it cites were found in a registry or an index.
The mouse Gene Expression Database (GXD): 2014 update
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Available information in the MGI database indicates that for some of these genes, their knock-out results in heart defects or they are expressed in the heart.
“However, available information in the MGI database [32, 34, 36] indicates that for some of these genes, their knock-out results in heart defects (Fig. 4, red border) or they are expressed in the heart (Fig. 4, double-line border).”
From A cis-regulatory-directed pipeline for the identification of genes involved in cardiac development and disease (2021) · cites this paper as [32]
The Introduction and the section on new search forms describe GXD as part of MGI and explain that users can search gene-expression data by anatomy and genes associated with phenotypes (page numbers unavailable). The paper does not identify the genes in the citing sentence or report that their knockouts cause heart defects or that they are expressed in the heart. (LLM, conf=0.82)
Experimental — accuracy not yet measured
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Percentages, sums and reported differences re-computed from the paper’s own numbers.
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Citations
Cites
Genome-wide atlas of gene expression in the adult mouse brain
Lein, E. S., Hawrylycz, M. J., Ao, N., Ayres, M., Bensinger, A., Bernard, A., Boe, A. F., Boguski, M. S., Brockway, K. S., Byrnes, E. J., et al. (2007) · Nature · doi:10.1038/nature05453 · Cited by 5,572
GenePaint.org: an atlas of gene expression patterns in the mouse embryo
Visel, A. (2004) · Nucleic Acids Research · doi:10.1093/nar/gkh029 · Cited by 528
Gene Expression Nervous System Atlas (GENSAT)
Heintz, N. (2004) · Nature Neuroscience · doi:10.1038/nn0504-483 · Cited by 323
Flagged first, then by citations
Research works printed but not linked: 25
- 10.1093/nar/gks1115 · DOI
- 10.1093/nar/gks1189 · DOI
- 10.1093/nar/gks1195 · DOI · Paper page
- 10.1093/nar/gks1236 · DOI
- 10.1093/nar/gkm987 · DOI
- 10.1093/nar/gks1048 · DOI
- 10.1093/nar/gkq1237 · DOI
- 10.1093/nar/gks1068 · DOI
- Hunter, 2011, InterPro in 2011: new developments in the family and domain prediction database, Nucleic Acids Res., 40, D306, 10.1093/nar/gkr948 · DOI
- 10.1002/humu.21466 · DOI
- 10.1093/nar/gks1174 · DOI
- 10.1093/nar/gks1193 · DOI · Paper page
- 10.1093/nar/gkq879 · DOI
- 10.1007/s00335-012-9408-0 · DOI
- 10.1126/science.8091224 · DOI
- 10.1093/nar/27.1.106 · DOI
- 10.1093/nar/gkl1003 · DOI
- 10.1093/nar/gkq1132 · DOI
- 10.1016/S0925-4773(98)00069-0 · DOI
- 10.1186/gb-2005-6-3-r29 · DOI
- 10.1242/dev.063594 · DOI
- 10.1371/journal.pbio.0040086 · DOI
- 10.1093/nar/gkp1018 · DOI
- 10.1007/s00335-012-9421-3 · DOI
- 10.1186/1471-2164-10-22 · DOI
Cited by
Sorted by citations
Abernathy, D. G., Kim, W. K., McCoy, M. J., Lake, A. M., Ouwenga, R., Lee, S. W., Xing, X., Li, D., Lee, H. J., Heuckeroth, R. O., et al. (2017) · Cell Stem Cell · doi:10.1016/j.stem.2017.08.002 · Cited by 145
Nim, H. T., Dang, L., Thiyagarajah, H., Bakopoulos, D., See, M., Charitakis, N., Sibbritt, T., Eichenlaub, M. P., Archer, S. K., Fossat, N., et al. (2021) · Genome Biology · doi:10.1186/s13059-021-02539-0 · Cited by 11
Metadata
- Authors
- Smith, C. M., Finger, J. H., Hayamizu, T. F., McCright, I. J., Xu, J., Berghout, J., Campbell, J., Corbani, L. E., Forthofer, K. L., Frost, P. J., Miers, D., Shaw, D. R., Stone, K. R., Eppig, J. T., Kadin, J. A., Richardson, J. E., & Ringwald, M.
- Venue
- Nucleic Acids Research
- Publisher
- Oxford University Press (OUP)
- Published
- 2013-10-25
- Volume
- 42
- Issue
- D1
- Pages
- D818-D824
- ISSN
- 0305-1048
- 1362-4962
- PMC
- PMC3965015
- Cited by
- 75
- References
- 3
- Language
- en
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
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