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Cited by 649

The DOI matches its Crossref record; 52 of the 52 references it cites were found in a registry or an index.

NCBI Viral Genomes Resource

Open access
Brister, J. Rodney, Ako-adjei, Danso, Bao, Yiming, Blinkova, Olga·2015·Nucleic Acids Research

Abstract

Recent technological innovations have ignited an explosion in virus genome sequencing that promises to fundamentally alter our understanding of viral biology and profoundly impact public health policy. Yet, any potential benefits from the billowing cloud of next generation sequence data hinge upon well implemented reference resources that facilitate the identification of sequences, aid in the assembly of sequence reads and provide reference annotation sources. The NCBI Viral Genomes Resource is a reference resource designed to bring order to this sequence shockwave and improve usability of viral sequence data. The resource can be accessed at http://www.ncbi.nlm.nih.gov/genome/viruses/ and catalogs all publicly available virus genome sequences and curates reference genome sequences. As the number of genome sequences has grown, so too have the difficulties in annotating and maintaining reference sequences. The rapid expansion of the viral sequence universe has forced a recalibration of the data model to better provide extant sequence representation and enhanced reference sequence products to serve the needs of the various viral communities. This, in turn, has placed increased emphasis on leveraging the knowledge of individual scientific communities to identify important viral sequences and develop well annotated reference virus genome sets.

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Citations

Cites

Show all 52 references

Research works printed but not linked: 7

  1. Bao, 2007, FLAN: a web server for influenza virus genome annotation, Nucleic Acids Res., 35, W280, 10.1093/nar/gkm354 · doi:10.1093/nar/gkm354
  2. Pourkarim, 2014, Molecular identification of hepatitis B virus genotypes/subgenotypes: revised classification hurdles and updated resolutions, World J. Gastroenterol., 20, 7152, 10.3748/wjg.v20.i23.7152 · doi:10.3748/wjg.v20.i23.7152
  3. Tanwar, 2012, Is there any value to hepatitis B virus genotype analysis, Curr. Gastroenterol. Rep., 14, 37, 10.1007/s11894-011-0233-5 · doi:10.1007/s11894-011-0233-5
  4. Jancovich, 2012, Virus Taxonomy: Classification and Nomenclature of Viruses: Ninth Report of the International Committee on Taxonomy of Viruses
  5. Maan, 2007, Rapid cDNA synthesis and sequencing techniques for the genetic study of bluetongue and other dsRNA viruses, J. Virol. Methods, 143, 132, 10.1016/j.jviromet.2007.02.016 · doi:10.1016/j.jviromet.2007.02.016
  6. Resch, 2009, Virus variation resources at the National Center for Biotechnology Information: dengue virus, BMC Microbiol., 9, 65, 10.1186/1471-2180-9-65 · doi:10.1186/1471-2180-9-65
  7. Rozanov, 2004, A web-based genotyping resource for viral sequences, Nucleic Acids Res., 32, W654, 10.1093/nar/gkh419 · doi:10.1093/nar/gkh419

Cited by

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Metadata

Authors
Brister, J. R., Ako-adjei, D., Bao, Y., & Blinkova, O.
Venue
Nucleic Acids Research
Published
2014-11-26
Volume
43
Issue
D1
Pages
D571-D577
ISSN
  • 0305-1048 (ISSN-L)
  • 1362-4962
OpenAlex
W2108982334
Cited by
649
References
52
FWCI
7.06
Type
journal article
Language
en
Open access
gold

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CoChat. (2026). Citation check: NCBI Viral Genomes Resource. https://app.cochat.ai/papers/10.1093/nar/gku1207
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Brister, J. R., Ako-adjei, D., Bao, Y., & Blinkova, O. (2015). NCBI Viral Genomes Resource. Nucleic Acids Research. https://doi.org/10.1093/nar/gku1207

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Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).

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