HMMER web server: 2018 update

Cited by (1,002)

Items 701–800 of 1,002

1. The Activity of the Durum Wheat (Triticum durum L.) Catalase 1 (TdCAT1) Is Modulated by Calmodulin
   Mouna Ghorbel, Kaouthar Feki, Sana Tounsi, Najla Haddaji, Moez Hanin, Faïçal Brini · 2022 · Antioxidants
2. A genome-wide search of Toll/Interleukin-1 receptor (TIR) domain-containing adapter molecule (TICAM) and their evolutionary divergence from other TIR domain containing proteins
   Shailya Verma, Ramanathan Sowdhamini · 2022 · Biology Direct
3. Identification, characterization, and expression profiling of the putative U-box E3 ubiquitin ligase gene family in Sorghum bicolor
   Yuanpeng Fang, Qiaoli Du, Qian Yang, Junmei Jiang, Xiaolong Hou, Zaifu Yang, Degang Zhao, Xiangyang Li, Xin Xie · 2022 · Frontiers in Microbiology
4. Geobacter-associated prophages confer beneficial effect on dissimilatory reduction of Fe(III) oxides
   Guiqin Yang, Annian Lin, Xian Wu, Canfen Lin, Siyue Zhu, Zhuang Li · 2022 · Fundamental Research
5. Phylogenomic analyses across land plants reveals motifs and coexpression patterns useful for functional prediction in the BAHD acyltransferase family
   Lars H. Kruse, Benjamin Fehr, Jason D. Chobirko, Gaurav D. Moghe · 2023 · Frontiers in Plant Science
6. Characterization of chitinases from the GH18 gene family in the myxomycete Physarum polycephalum.
   S. Renaud, A. Dussutour, F. Daboussi, D. Pompon · 2023 · Biochimica et Biophysica Acta - General Subjects
7. Characterization of Molecular Diversity and Organization of Phycobilisomes in Thermophilic Cyanobacteria
   Jie Tang, Huizhe Zhou, Dan Yao, Lian-Ming Du, M. Daroch · 2023 · International Journal of Molecular Sciences
8. Insight into the phylogeny and metabolic divergence of Monascus species (M. pilosus, M. ruber, and M. purpureus) at the genome level
   Zhiyu Zhang, Mengfei Cui, Panting Chen, Juxing Li, Zhitao Mao, Yufeng Mao, Zhenjing Li, Qingbin M. Guo, Changlu Wang, Xiaoping Liao et al. · 2023 · Frontiers in Microbiology
9. Gut microbiota enhance energy accumulation of black-necked crane to cope with impending migration
   Wenhao Li, Junsong Zhao, Hong Tian, Yanqiong Shen, Yuanjian Wang, Mingcui Shao, Tingsong Xiong, Yongfang Yao, Lin Zhang, Xinyu Chen et al. · 2023 · Applied Microbiology and Biotechnology
10. Metagenomics analysis reveals differences in rumen microbiota in cows with low and high milk protein percentage
    Abdulmumin Baba Amin, Lei Zhang, JiYou Zhang, Shengyong Mao · 2023 · Applied Microbiology and Biotechnology
11. Genome mining shows that retroviruses are pervasively invading vertebrate genomes
    Jianhua Wang, Guan‐Zhu Han · 2023 · Nature Communications
12. A Genome-Wide Analysis of the Pentatricopeptide Repeat Protein Gene Family in Two Kiwifruit Species with an Emphasis on the Role of RNA Editing in Pathogen Stress
    Aidi Zhang, Yuhong Xiong, Fang Liu, Xiujun Zhang · 2023 · International Journal of Molecular Sciences
13. Large-Scale Identification and Characterization Analysis of VQ Family Genes in Plants, Especially Gymnosperms
    Jinfu Tian, Jiahui Zhang, Frédéric Francis · 2023 · International Journal of Molecular Sciences
14. Genome-Wide Investigation and Expression Analysis of the Catalase Gene Family in Oat Plants (Avena sativa L.)
    Mouna Ghorbel, Ikram Zribi, Mejda Chihaoui, Ahmad Alghamidi, Khalil Mseddi, Faïçal Brini · 2023 · Plants
15. All Kinds of Sunny Colors Synthesized from Methane: Genome-Encoded Carotenoid Production by Methylomonas Species
    Igor Y. Oshkin, Ekaterina N. Tikhonova, Ruslan Z. Suleimanov, Aleksandr Aleksandrovich Ashikhmin, Anastasia A. Ivanova, Н. В. Пименов, Svetlana N. Dedysh · 2023 · Microorganisms
16. Comprehensive Analysis of the Catalase (CAT) Gene Family and Expression Patterns in Rubber Tree (Hevea brasiliensis) under Various Abiotic Stresses and Multiple Hormone Treatments
    Wencai Yu, Kong GuangHong, Huajin Ya, Ligang He, Yu Wu, Hanyao Zhang · 2023 · International Journal of Molecular Sciences
17. Alternative conformations of a group 4 Late Embryogenesis Abundant protein associated to its in vitro protective activity
    David F. Rendón‐Luna, Inti A. Arroyo‐Mosso, Haydee De Luna-Valenciano, Francisco Campos, Lorenzo Segovia, Gloria Saab‐Rincón, Cesar L. Cuevas‐Velazquez, José Luis Reyes, Alejandra Alicia Covarrubias · 2024 · Scientific Reports
18. A Genome-Wide Analysis of the Jasmonic Acid Biosynthesis Gene Families in Peanut Reveals Their Crucial Roles in Growth and Abiotic Stresses
    Xinlei Ma, Xin Ai, Chenghua Li, Shiyu Wang, Nan Zhang, Jingyao Ren, Jing Wang, Chao Zhong, Xinhua Zhao, He Zhang et al. · 2024 · International Journal of Molecular Sciences
19. ProFun-SOM: Protein Function Prediction for Specific Ontology Based on Multiple Sequence Alignment Reconstruction
    Jiangyi Shao, Junjie Chen, Bin Liu · 2024 · IEEE Transactions on Neural Networks and Learning Systems
20. Biocontrol efficacy of Pseudomonas mediterranea PVCT 3C against Plenodomus tracheiphilus: In vitro and in planta mechanisms at early disease stages
    Giulio Dimaria, Angelo Sicilia, Francesco Modica, Marcella Russo, Marina Claudia Bazzano, Maria Elena Massimino, Angela Roberta Lo Piero, P. Bella, Vittoria Catara · 2024 · Microbiological Research
21. The Jasmonic Acid Biosynthetic Genes SmLOX4 and SmLOX5 Are Involved in Heat Tolerance in Eggplant
    Renjian Liu, Bingbing Shu, Yuyuan Wang, Jiazhu Feng, Bingwei Yu, Yuwei Gan, Yonggui Liang, Zhengkun Qiu, Shuangshuang Yan, Bihao Cao · 2024 · Plant and Cell Physiology
22. Comprehensive genomic analysis of CiPawPYL-PP2C-SnRK family genes in pecan (Carya illinoinensis) and functional characterization of CiPawSnRK2.1 under salt stress responses
    Guoming Wang, Ying Xu, Sophia Lee Guan, Ji-Yu Zhang, Zhanhui Jia, Longjiao Hu, Min Zhai, Zhenghai Mo, Jiping Xuan · 2024 · International Journal of Biological Macromolecules
23. Genome-wide identification of the GATA gene family in melon (Cucumis melo) and analysis of their expression characteristics under biotic and abiotic stresses
    Ling Zheng, Lin Hua Tang, Jinbo Li · 2024 · Frontiers in Plant Science
24. Global niche partitioning of purine and pyrimidine cross-feeding among ocean microbes
    Rogier Braakman, Brandon M. Satinsky, Tyler J. O’Keefe, Krista Longnecker, Shane Hogle, Jamie W. Becker, Robert C. Li, Keven D. Dooley, Aldo A. Arellano, Melissa C. Kido Soule et al. · 2025 · Science Advances
25. Genome-wide identification and expression analysis of C3H gene family in melon
    Ling Zheng, Haifang Dai, Yuanfang Mu, Jinbo Li, Yanwei Cheng, Jianming Han · 2025 · Frontiers in Plant Science
26. New group of transmembrane proteins associated with desiccation tolerance in the anhydrobiotic midge Polypedilum vanderplanki
    Taisiya A. Voronina, Alexander A. Nesmelov, Sabina A. Kondratyeva, Ruslan M. Deviatiiarov, Yugo Miyata, Shoko Tokumoto, Richard Cornette, Oleg Gusev, Takahiro Kikawada, Elena Ilyasovna Shagimardanova · 2020 · Scientific Reports
27. Pseudomonas lalkuanensis sp. nov., isolated from a bacterial consortia of contaminated soil enriched for the remediation of e-waste
    Vipool Thorat, Kiran Kirdat, Bhavesh Tiwarekar, Elaine DaCosta, Prasenjit Debbarma, Yogesh Shreepad Shouche, Shivaji Sathe, Reeta Goel, Tushar Dilipchand Lodha, Amit Yadav · 2020 · INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
28. Genome-Wide Analysis of Tubulin Gene Family in Cassava and Expression of Family Member FtsZ2-1 during Various Stress
    Shuangbao Li, Peng Cao, Congcong Wang, Jianchun Guo, Yuwei Zang, Kunlin Wu, Fangfang Ran, Liangwang Liu, Dayong Wang, Yi Min · 2021 · Plants
29. Fungal Ice2p is in the same superfamily as SERINCs , restriction factors for HIV and other viruses
    Ganiyu O. Alli‐Balogun, Tim P. Levine · 2021 · Proteins Structure Function and Bioinformatics
30. Identification and Expression Analysis of miR160 and Their Target Genes in Cucumber
    Yaoyao Li, Weirong Luo, Yongdong Sun, Huaicheng Chang, Kai Ma, Zhenxiang Zhao, Lin Lu · 2021 · Biochemical Genetics
31. EnsembleFam: towards more accurate protein family prediction in the twilight zone
    Mohammad Neamul Kabir, Limsoon Wong · 2022 · BMC Bioinformatics
32. Genome-Wide Identification and Expressional Profiling of the Metal Tolerance Protein Gene Family in Brassica napus
    Tao Xie, Wenjing Yang, Xin Chen, Hao Rong, Youping Wang, Jinjin Jiang · 2022 · Genes
33. Transcriptomes of Giant Sea Anemones from Okinawa as a Tool for Understanding Their Phylogeny and Symbiotic Relationships with Anemonefish
    Rio Kashimoto, Miyako Tanimoto, Saori Miura, Noriyuki Satoh, Vincent Laudet, Konstantin Khalturin · 2022 · ZOOLOGICAL SCIENCE
34. Uncovering a Complex Virome Associated with the Cacao Pathogens Ceratocystis cacaofunesta and Ceratocystis fimbriata
    Roy Bogardid Ardón Espinal, Sabrina Ferreira de Santana, Vinícius Castro Santos, Gabriela Nicolle Ramos-Lizardo, Raner José Santana Silva, Ronan Xavier Corrêa, Leandro Lopes Loguercio, Aristóteles Goés‐Neto, Carlos Priminho Pirovani, Paula Luize Camargos Fonseca et al. · 2023 · Pathogens
35. Iron–Sulfur Cluster Biosynthesis in Algae with Complex Plastids
    Christopher Grosche, Angelika Diehl, Stefan Andreas Rensing, Uwe G. Maier · 2018 · Genome Biology and Evolution
36. rstoolbox - a Python library for large-scale analysis of computational protein design data and structural bioinformatics
    Jaume Bonet, Zander Harteveld, Fabian Sesterhenn, Andreas Scheck, Bruno E. Correia · 2019 · BMC Bioinformatics
37. Data-driven rational biosynthesis design: from molecules to cell factories
    Chen Fu, Le Yuan, Shaozhen Ding, Yu Ting Tian, Qian‐Nan Hu · 2019 · Briefings in Bioinformatics
38. Description of a Novel Mycovirus in the Phytopathogen Fusarium culmorum and a Related EVE in the Yeast Lipomyces starkeyi
    Mathieu Mahillon, Gustavo Romay, Charlotte Liénard, Anne Legrève, Claude Bragard · 2020 · Viruses
39. Haemophilus influenzae HP1 Bacteriophage Encodes a Lytic Cassette with a Pinholin and a Signal-Arrest-Release Endolysin
    Monika Adamczyk-Popławska, Zuzanna Tracz‐Gaszewska, Przemysław Lasota, Agnieszka Kwiatek, Andrzej Piekarowicz · 2020 · International Journal of Molecular Sciences
40. Long-read transcriptome and other genomic resources for the angiosperm Silene noctiflora
    Alissa M. Williams, Michael W. Itgen, Amanda K. Broz, Olivia G. Carter, Daniel B. Sloan · 2021 · G3 Genes Genomes Genetics
41. Maturation of Rhodobacter capsulatus Multicopper Oxidase CutO Depends on the CopA Copper Efflux Pathway and Requires the cutF Product
    Yavuz Öztürk, Crysten Blaby, Noel Daum, Andreea Andrei, Juna Rauch, Fevzi Daldal, Hans‐Georg Koch · 2021 · Frontiers in Microbiology
42. Evidence for the emergence of β-trefoils by ‘Peptide Budding’ from an IgG-like β-sandwich
    Liam M. Longo, Rachel Kolodny, Shawn E. McGlynn · 2022 · PLoS Computational Biology
43. Genome binning of viral entities from bulk metagenomics data
    Joachim Johansen, Damian Rafal Plichta, Jakob Nybo Nissen, Marie Louise Jespersen, Shiraz Ali Shah, Ling Deng, Jakob Stokholm, Hans Flinker Bisgaard, Dennis Sandris Nielsen, Søren Johannes Sørensen et al. · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
44. Genome-Wide Identification and Characterization of the CCT Gene Family in Rapeseed (Brassica napus L.)
    Liyiqi Yu, Jichun Xia, Rujiao Jiang, Jiajia Wang, Xiaolong Yuan, Xinchao Dong, Zhenjie Chen, Zizheng Zhao, Boen Wu, Lanlan Zhan et al. · 2024 · International Journal of Molecular Sciences
45. Genome-wide identification and expression profiling of MYB transcription factors in Artemisia argyi
    Sainan Peng, Qianwen Zhang, Yun Yang, Yukun Li, Wunian Feng, Dan Zhao, Bisheng Huang, Dahui Liu, Yuhuan Miao · 2025 · BMC Genomics
46. High-accuracy protein complex structure modeling based on sequence-derived structure complementarity
    Minghua Hou, Yuhao Xia, Pengcheng Wang, Zichen Lv, Dongliang Hou, Xiaogen Zhou, Jianyang Zeng, Guijun Zhang · 2025 · Nature Communications
47. HMMER web server: 2026 update
    Aleksandar Rajković, Martín Beracochea, Alexander B. Rogers, Sean R. Eddy, Nicholas P Carter, Robert D. Finn · 2026 · Nucleic Acids Research
48. Proteo-Trancriptomic Analyses Reveal a Large Expansion of Metalloprotease-Like Proteins in Atypical Venom Vesicles of the Wasp Meteorus pulchricornis (Braconidae)
    Jean‐Luc Gatti, Maya Belghazi, Fabrice Legeai, Marc Ravallec, Marie Frayssinet, Stéphanie Robin, Djibril Aboubakar Souna, Srinivasan Ramasamy, Manuele Tamò, Marylène Poirié et al. · 2021 · Toxins
49. Global Analysis of the WOX Transcription Factor Gene Family in Populus × xiaohei T. S. Hwang et Liang Reveals Their Stress−Responsive Patterns
    Yue Li, Chunhui Jin, Yuting Liu, Lili Wang, Fangrui Li, Bo Wang, Guifeng Liu, Jing Jiang, Huiyu Li · 2022 · Forests
50. CG7630 is the Drosophila melanogaster homolog of the cytochrome c oxidase subunit COX7B
    Michele Brischigliaro, Alfredo Cabrera‐Orefice, Mattia Sturlese, Dei M. Elurbe, Elena Frigo, Erika Fernández‐Vizarra, Stefano Moro, Martijn A. Huynen, Susanne Arnold, Carlo Fiore Viscomi et al. · 2022 · EMBO Reports
51. Transcriptomic analysis of polyketide synthesis in dinoflagellate, Prorocentrum lima
    Xiukun Wan, Ge Yao, Kang Wang, Shaoheng Bao, Penggang Han, Fuli Wang, Tianyu Song, Hui Jiang · 2023 · Harmful Algae
52. Responses of carbapenemase-producing and non-producing carbapenem-resistant Pseudomonas aeruginosa strains to meropenem revealed by quantitative tandem mass spectrometry proteomics
    Francisco Salvà‐Serra, Daniel Jaén‐Luchoro, Nachiket Prakash Marathe, Ingegerd Adlerberth, Edward R. B. Moore, Roger Karlsson · 2023 · Frontiers in Microbiology
53. Structural features discriminating hybrid histidine kinase Rec domains from response regulator homologs
    Mitchell Brüderlin, Raphael Böhm, Firas Fadel, Sebastian Hiller, Tilman Schirmer, Badri N. Dubey · 2023 · Nature Communications
54. Genome-wide analysis of the GLP gene family and overexpression of GLP1-5–1 to promote lignin accumulation during early somatic embryo development in Dimocarpus longan
    Zhuoyun Li, Zhuoran Fu, Shuting Zhang, Xueying Zhang, Xiaodong Xue, Yukun Chen, Zihao Zhang, Zhongxiong Lai, Yuling Lin · 2023 · BMC Genomics
55. DNA methylation signatures of duplicate gene evolution in angiosperms
    Sunil K. Kenchanmane Raju, Marshall Ledford, Chad E. Niederhuth · 2023 · PLANT PHYSIOLOGY
56. Unexplored diversity and ecological functions of transposable phages
    Mujie Zhang, Yali Hao, Yi Yi, Shunzhang Liu, Qingyang Sun, Xiaoli Tan, Shan Tang, Xiang Xiao, Huahua Jian · 2023 · The ISME Journal
57. Comprehensive analysis of OpHD-ZIP transcription factors related to the regulation of camptothecin biosynthesis in Ophiorrhiza pumila
    Jingyi Wang, Yongpeng Li, Yinkai Yang, Chengyu Xiao, Qingyan Ruan, Pengyang Li, Qin Zhou, Miaomiao Sheng, Xiaolong Hao, Guoyin Kai · 2023 · International Journal of Biological Macromolecules
58. Exploring the role of detoxification genes in the resistance of Bursaphelenchus xylophilus to different exogenous nematicidal substances using transcriptomic analyses
    Jingxin Cao, Xin Hao, Yang Eric Li, Ruina Tan, Zhixin Cui, Lu Li, Yue Zhang, Jingyu Cao, Mengru Min, Liwei Liang et al. · 2023 · Pesticide Biochemistry and Physiology
59. Genome-wide identification of GH9 gene family and the assessment of its role during fruit abscission zone formation in Vaccinium ashei
    Yingying Wang, Yue Xu, Fangfang Liao, Ting Li, Xiaolong Li, Boping Wu, Seung‐Beom Hong, Kai Xu, Yunxiang Zang, Weiwei Zheng · 2023 · Plant Cell Reports
60. HMDB: A curated database of genes involved in hydrocarbon monooxygenation reaction with homologous genes as background
    Shaojing Wang, Yuan Yun, Xuefeng Tian, Zhaoying Su, Zitong Liao, Guoqiang Li, Ting Ma · 2023 · Journal of Hazardous Materials
61. Genes possibly related to symbiosis in early life stages of Acropora tenuis inoculated with Symbiodinium microadriaticum
    Yuki Yoshioka, Yi‐Ling Chiu, Taiga Uchida, Hiroshi Yamashita, Go Suzuki, Chuya Shinzato · 2023 · Communications Biology
62. GFAnno: integrated method for plant flavonoid biosynthesis pathway gene annotation
    Liuxu Du, Cui Lu, Zhentao Wang, LongXiang Zou, Yi Xiong, Qun‐Jie Zhang · 2023 · Beverage Plant Research
63. Genomic analysis of multidrug-resistant Delftia tsuruhatensis isolated from raw bovine milk
    Pavel A. Andriyanov, Daria D. Kashina, Alena N. Menshikova · 2024 · Frontiers in Microbiology
64. Genome-wide identification, stress- and hormone-responsive expression characteristics, and regulatory pattern analysis of Scutellaria baicalensis SbSPLs
    Jiawen Wu, Ziyi Zhao, Renchuan Hu, Yunfeng Huang · 2024 · Plant Molecular Biology
65. Novel mechanisms of diversity generation in Acinetobacter baumannii resistance islands driven by Tn7-like elements
    Alberto Correa, Saadlee Shehreen, Laura Chacon Machado, Jordan E. Thesier, Lille M. Cunic, Michael T. Petassi, Joshua Chu, Bennett J. Kapili, Yu Jia, Kevin A England et al. · 2024 · Nucleic Acids Research
66. On knowing a gene: A distributional hypothesis of gene function
    Jason J. Kwon, Joshua Pan, Guadalupe Gonzalez, William C. Hahn, Marinka Žitnik · 2024 · Cell Systems
67. The inorganic pyrophosphatases of microorganisms: a structural and functional review
    Rodolfo García‐Contreras, Javier de la Mora, Hector Manuel Mora-Montes, José A. Martínez-Álvarez, Marcos Vicente-Gómez, Felipe Padilla‐Vaca, Naurú Idalia Vargas-Maya, Bernardo Franco · 2024 · PeerJ
68. Tandem mobilization of anti-phage defenses alongside SCCmec elements in staphylococci
    Motaher Hossain, Barbaros Aslan, Asma Hatoum-Aslan · 2024 · Nature Communications
69. A human gut bacterium antagonizes neighboring bacteria by altering their protein-folding ability
    Bentley Lim, Jinghua Xu, Igor H. Wierzbicki, Carlos G. Gonzalez, Zhe Chen, David J. Gonzalez, Xiang Gao, Andrew L. Goodman · 2025 · Cell Host & Microbe
70. The mixed auto‐/allooctoploid genome of Japanese knotweed (Reynoutria japonica) provides insights into its polyploid origin and invasiveness
    Fanhong Wang, Minghao Li, Ze Liu, Wei Li, Qiang He, Longsheng Xing, Yao Xiao, Meijia Wang, Yu Wang, Cailian Du et al. · 2025 · The Plant Journal
71. Exploration of the genomic potential of the probiotic bacterium Lactiplantibacillus plantarum JBC5 (LPJBC5)
    Anupam Bhattacharya, Tulsi Kumari Joishy, Mojibur R. Khan · 2025 · Discover Bacteria.
72. Donor strand complementation and calcium ion coordination drive the chaperone-free polymerization of archaeal cannulae
    Mike Sleutel, Ravi R. Sonani, Jessalyn Miller, Fengbin Wang, Andres Gonzalez Socorro, Yang Chen, Reece Martin, Borries Demeler, Michael J. Rudolph, Vikram Alva et al. · 2025 · Nature Communications
73. Regulatory Potential of Long Non-Coding RNAs (lncRNAs) in Boar Spermatozoa with Good and Poor Freezability
    Leyland Fraser, Łukasz Paukszto, Anna Mańkowska, P. Brym, Przemysław D. Gilun, J Jastrzebski, Chandra S. Pareek, Dibyendu Kumar, Mariusz Pierzchała · 2020 · Life
74. Genome-Wide Identification, Characterization, and Expression Analyses of P-Type ATPase Superfamily Genes in Soybean
    Bingqian Zhao, Haicheng Wu, Wenjing Xu, Wei Zhang, Xi Chen, Yiyong Zhu, Huatao Chen, Houqing Zeng · 2020 · Agronomy
75. Genome-wide analysis of UGDH genes in Populus trichocarpa and responsiveness to nitrogen treatment
    Shuang Zhang, Lina Cao, Xue Sun, Jiajie Yu, Xiuyue Xu, Ruhui Chang, Juanfang Suo, Guanjun Liu, Zhiru Xu, Chunpu Qu · 2021 · 3 Biotech
76. Protein contact map refinement for improving structure prediction using generative adversarial networks
    Sai Raghavendra Maddhuri Venkata Subramaniya, Genki Terashi, Aashish Jain, Yuki Kagaya, Daisuke Kihara · 2021 · Bioinformatics
77. Improving Breakdown Voltage in AlGaN/GaN Metal-Insulator-Semiconductor HEMTs Through Electric-Field Dispersion Layer Material Selection
    Yu-Lin Tsai, Ting‐Chang Chang, Yu‐Ching Tsao, Mao‐Chou Tai, Hong‐Yi Tu, Ya–Ting Chien, Fu‐Yuan Jin, Hao-Xuan Zheng, Yu‐Shan Lin, Fong‐Min Ciou et al. · 2021 · IEEE Transactions on Device and Materials Reliability
78. Interactions of the Intracellular Bacterium Cardinium with Its Host, the House Dust Mite Dermatophagoides farinae , Based on Gene Expression Data
    Jan Hubert, Marta Nesvorná, Pavel B. Klimov, Tomáš Erban, Bruno Sopko, Scot E. Dowd, Erin D. Scully · 2021 · mSystems
79. Genomic insight into the scale specialization of the biological control agent Novius pumilus (Weise, 1892)
    Xue‐Fei Tang, Yu‐Hao Huang, Hao‐Sen Li, Pei‐Tao Chen, Huan‐Ying Yang, Yuan‐Sen Liang, Xue‐Yong Du, Zhenhua Liu, En-Feng Li, Yuchen Yang et al. · 2022 · BMC Genomics
80. The APAF1_C/WD40 repeat domain-encoding gene from the sea lettuce Ulva mutabilis sheds light on the evolution of NB-ARC domain-containing proteins in green plants
    Michiel Kwantes, Thomas Wichard · 2022 · Planta
81. Facile Production of (+)-Aristolochene and (+)-Bicyclogermacrene in Escherichia coli Using Newly Discovered Sesquiterpene Synthases from Penicillium expansum
    Zhengyu Huang, Qing‐Yang Wu, Chun‐Xiu Li, Hui‐Lei Yu, Jian‐He Xu · 2022 · Journal of Agricultural and Food Chemistry
82. Epigenetic machinery is functionally conserved in cephalopods
    Filippo Macchi, Eric Edsinger, Kirsten C. Sadler · 2022 · BMC Biology
83. Genome-wide identification of XTH genes in Liriodendron chinense and functional characterization of LcXTH21
    Junpeng Wu, Yaxian Zong, Zhonghua Tu, Lichun Yang, Wei li, Zhengkun Cui, Ziyuan Hao, Huogen Li · 2022 · Frontiers in Plant Science
84. Comparative Analysis of Alternative Splicing in Two Contrasting Apple Cultivars Defense against Alternaria alternata Apple Pathotype Infection
    Tingting Zhou, You-lei He, Xianqi Zeng, Binhua Cai, Shenchun Qu, Sanhong Wang · 2022 · International Journal of Molecular Sciences
85. A draft of the genome of the Gulf Coast tick, Amblyomma maculatum
    José M. C. Ribeiro, Natalia J. Bayona‐Vásquez, Khemraj Budachetri, Deepak Kumar, Julia C. Frederick, Faizan Tahir, Brant C. Faircloth, Travis C. Glenn, Shahid Karim · 2022 · Ticks and Tick-borne Diseases
86. Evolutionary Analysis of the Melon (Cucumis melo L.) GH3 Gene Family and Identification of GH3 Genes Related to Fruit Growth and Development
    Sheng Chen, Kaiqin Zhong, Yongyu Li, Changhui Bai, Zhuzheng Xue, Yufen Wu · 2023 · Plants
87. Multiple Campylobacter jejuni proteins affecting the peptidoglycan structure and the degree of helical cell curvature
    Emilisa Frirdich, Jenny Vermeulen, Jacob Biboy, Waldemar Vollmer, Erin C. Gaynor · 2023 · Frontiers in Microbiology
88. FAS: assessing the similarity between proteins using multi-layered feature architectures
    Julian Dosch, Holger Bergmann, Vinh Tran, Ingo Ebersberger · 2023 · Bioinformatics
89. Compounding Achromobacter Phages for Therapeutic Applications
    Ana Georgina Cobián Güemes, Tram Le, María Isabel Rojas, Nicole E. Jacobson, Helena Villela, Katelyn A. McNair, Shr-Hau Hung, Lili Han, Lance Boling, Jessica Claire Octavio et al. · 2023 · Viruses
90. Bacteriophages limitedly contribute to the antimicrobial resistome of microbial communities in wastewater treatment plants
    Raffaella Sabatino, Tomasa Sbaffi, Periyasamy Sivalingam, Gianluca Corno, Diego Fontaneto, Andrea Di Cesare · 2023 · Microbiology Spectrum
91. SeqTailor: a user-friendly webserver for the extraction of DNA or protein sequences from next-generation sequencing data
    Peng Zhang, Bertrand Boisson, Peter D. Stenson, D.N. Cooper, Jean‐Laurent Casanova, Laurent Abel, Yuval Itan · 2019 · Nucleic Acids Research
92. Structural modeling of protein complexes: Current capabilities and challenges
    Justas Dapkūnas, Kliment Olechnovič, Česlovas Venclovas · 2019 · Proteins Structure Function and Bioinformatics
93. Midgut fluxes and digestive enzyme recycling in Musca domestica: A molecular approach
    Ignacio G. Barroso, Felipe J. Fuzita, Clélia Ferreira, Walter Ribeiro Terra · 2019 · Comparative Biochemistry and Physiology Part A Molecular & Integrative Physiology
94. Nocardiopsis deserti sp. nov., isolated from a high altitude Atacama Desert soil
    Mipeshwaree Devi Asem, Nimaichand Salam, Hamidah Binti Idris, Xiao-Tong Zhang, Alan T. Bull, Wen‐Jun Li, Michael Goodfellow · 2020 · INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
95. Genetic Diversity of Transcription Factor Genes in Triticum and Mining for Promising Haplotypes for Beneficial Agronomic Traits
    Guang Yang, Ying Zhang, Xinyu Wei, Licao Cui, Xiaojun Nie · 2022 · Frontiers in Plant Science
96. Anti-diuretic hormone ITP signals via a guanylate cyclase receptor to modulate systemic homeostasis in Drosophila
    Jayati Gera, Marishia Agard, Hannah Nave, Farwa Sajadi, Leena Thorat, Shu Kondo, Dick R. Nässel, Jean-Paul V. Paluzzi, Meet Zandawala · 2024 · eLife
97. The copper-linked Escherichia coli AZY operon: Structure, metal binding, and a possible physiological role in copper delivery
    Rose C. Hadley, Daniel Zhitnitsky, Nurit Livnat‐Levanon, Gal Masrati, Elena Vigonsky, Jessica Rose, Nir Ben‐Tal, Amy C. Rosenzweig, Oded Lewinson · 2021 · Journal of Biological Chemistry
98. Genome-Wide Characterization and Expression Analysis of KH Family Genes Response to ABA and SA in Arabidopsis thaliana
    Yanjie Zhang, Yu Ma, Ruiqi Liu, Guanglin Li · 2022 · International Journal of Molecular Sciences
99. A Chromosome-level Genome Assembly of the Highly Heterozygous Sea UrchinEchinometrasp. EZ Reveals Adaptation in the Regulatory Regions of Stress Response Genes
    Remi N. Ketchum, Phillip L. Davidson, Edward G Smith, Gregory A. Wray, John A. Burt, Joseph F. Ryan, Adam M. Reitzel · 2022 · Genome Biology and Evolution
100. HGTree v2.0: a comprehensive database update for horizontal gene transfer (HGT) events detected by the tree-reconciliation method
     Youngseok Thomas Choi, Sojin Ahn, Myeongkyu Park, SaetByeol Lee, Seoae Cho, Heebal Kim · 2022 · Nucleic Acids Research