Fungal denitrification and nitric oxide reductase cytochrome P450nor

Cell biology and molecular basis of denitrification

Zumft, W. G. (1997) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.61.4.533-616.1997 · Cited by 3,483 · see citing works

Missing lithotroph identified as new planctomycete

Strous, M., Fuerst, J. A., Kramer, E. H. M., Logemann, S., Gerard Muyzer, C., van de Pas-Schoonen, K. T., Webb, R. I., Kuenen, J. G., & Jetten, M. S. M. (1999) · Nature · doi:10.1038/22749 · Cited by 1,578 · see citing works

Enzymes and associated electron transport systems that catalyse the respiratory reduction of nitrogen oxides and oxyanions

Berks, B. C., Ferguson, S. J., Moir, J. W. B., & Richardson, D. J. (1995) · Biochimica et Biophysica Acta (BBA) - Bioenergetics · doi:10.1016/0005-2728(95)00092-5 · Cited by 596 · see citing works

Dissimilatory Nitrite and Nitric Oxide Reductases

Averill, B. A. (1996) · Chemical Reviews · doi:10.1021/cr950056p · Cited by 545 · see citing works

Evidence for Fungal Dominance of Denitrification and Codenitrification in a Grassland Soil

Laughlin, R. J., & Stevens, R. J. (2002) · Soil Science Society of America Journal · doi:10.2136/sssaj2002.1540 · Cited by 425 · see citing works

Denitrification by fungi

Shoun, H., Kim, D., Uchiyama, H., & Sugiyama, J. (1992) · FEMS Microbiology Letters · doi:10.1111/j.1574-6968.1992.tb05331.x · Cited by 422 · see citing works

Mitochondria as we don't know them

Tielens, A. G. M., Rotte, C., van Hellemond, J. J., & Martin, W. F. (2002) · Trends in Biochemical Sciences · doi:10.1016/s0968-0004(02)02193-x · Cited by 375 · see citing works

Denitrification by the fungus Fusarium oxysporum and involvement of cytochrome P-450 in the respiratory nitrite reduction

Shoun, H., & Tanimoto, T. (1991) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)99130-1 · Cited by 257 · see citing works

Cytochrome P-450 55A1 (P-450dNIR) acts as nitric oxide reductase employing NADH as the direct electron donor.

Nakahara, K., Tanimoto, T., Hatano, K., Usuda, K., & Shoun, H. (1993) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)53102-1 · Cited by 249 · see citing works

Spectroscopic and Kinetic Studies on Reaction of Cytochrome P450nor with Nitric Oxide

Shiro, Y., Fujii, M., Iizuka, T., Adachi, S., Tsukamoto, K., Nakahara, K., & Shoun, H. (1995) · Journal of Biological Chemistry · doi:10.1074/jbc.270.4.1617 · Cited by 206 · see citing works

Crystal structure of nitric oxide reductase from denitrifying fungus Fusarium oxysporum

Park, S., Shimizu, H., Adachi, S., Nakagawa, A., Tanaka, I., Nakahara, K., Shoun, H., OBAYASHI, E., Nakamura, H., lizuka, T., et al. (1997) · Nature Structural Biology · doi:10.1038/nsb1097-827 · Cited by 187 · see citing works

Isotopologue fractionation during N 2 O production by fungal denitrification

Sutka, R. L., Adams, G. C., Ostrom, N. E., & Ostrom, P. H. (2008) · Rapid Communications in Mass Spectrometry · doi:10.1002/rcm.3820 · Cited by 184 · see citing works

Denitrification, a Novel Type of Respiratory Metabolism in Fungal Mitochondrion

Kobayashi, M., Matsuo, Y., Takimoto, A., Suzuki, S., Maruo, F., & Shoun, H. (1996) · Journal of Biological Chemistry · doi:10.1074/jbc.271.27.16263 · Cited by 184 · see citing works

Nitrogen cycle enzymology

Ferguson, S. J. (1998) · Current Opinion in Chemical Biology · doi:10.1016/s1367-5931(98)80059-8 · Cited by 177 · see citing works

Ammonia Fermentation, a Novel Anoxic Metabolism of Nitrate by Fungi

Zhou, Z., Takaya, N., Nakamura, A., Yamaguchi, M., Takeo, K., & Shoun, H. (2002) · Journal of Biological Chemistry · doi:10.1074/jbc.m109096200 · Cited by 149 · see citing works

Electronic structure of iron(II)–porphyrin nitroxyl complexes: Molecular mechanism of fungal nitric oxide reductase (P450nor)

Lehnert, N., Praneeth, V. K. K., & Paulat, F. (2006) · Journal of Computational Chemistry · doi:10.1002/jcc.20400 · Cited by 121 · see citing works

Nucleotide sequence of the unique nitrate/nitrite-inducible cytochrome P-450 cDNA from Fusarium oxysporum

Kizawa, H., Tomura, D., Oda, M., Fukamizu, A., Hoshino, T., Gotoh, O., Yasui, T., & Shoun, H. (1991) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)99270-7 · Cited by 121 · see citing works

Anaerobic denitrification in fungi from the coastal marine sediments off Goa, India

Manohar, C. S., & Raghukumar, C. (2008) · Mycological Research · doi:10.1016/j.mycres.2008.08.009 · Cited by 114 · see citing works

Structural diversity of cytochrome P450 enzyme system

Omura, T. (2010) · The Journal of Biochemistry · doi:10.1093/jb/mvq001 · Cited by 112 · see citing works

Denitrification by the fungus Cylindrocarpon tonkinense: anaerobic cell growth and two isozyme forms of cytochrome P-450nor

Usuda, K., Toritsuka, N., Matsuo, Y., Kim, D. H., & Shoun, H. (1995) · Applied and Environmental Microbiology · doi:10.1128/aem.61.3.883-889.1995 · Cited by 107 · see citing works

Proton Delivery in NO Reduction by Fungal Nitric-oxide Reductase

Shimizu, H., OBAYASHI, E., Gomi, Y., Arakawa, H., Park, S., Nakamura, H., Adachi, S., Shoun, H., & Shiro, Y. (2000) · Journal of Biological Chemistry · doi:10.1074/jbc.275.7.4816 · Cited by 107 · see citing works

The Copper-containing Dissimilatory Nitrite Reductase Involved in the Denitrifying System of the Fungus Fusarium oxysporum

Kobayashi, M., & Shoun, H. (1995) · Journal of Biological Chemistry · doi:10.1074/jbc.270.8.4146 · Cited by 94 · see citing works

Co-denitrification by the denitrifying system of the fungusFusarium oxysporum

Tanimoto, T., Hatano, K.-I., Kim, D.-H., Uchiyama, H., & Shoun, H. (1992) · FEMS Microbiology Letters · doi:10.1111/j.1574-6968.1992.tb05086.x · Cited by 90 · see citing works

Isotope effects and intermediates in the reduction of NO by P450NOR

Daiber, A., Nauser, T., Takaya, N., Kudo, T., Weber, P. B., Hultschig, C., Shoun, H., & Ullrich, V. (2002) · Journal of Inorganic Biochemistry · doi:10.1016/s0162-0134(01)00386-5 · Cited by 90 · see citing works

Nitrate Reductase-Formate Dehydrogenase Couple Involved in the Fungal Denitrification by Fusarium oxysporum

Uchimura, H., Enjoji, H., Seki, T., Taguchi, A., Tsakaya, N., & Shoun, H. (2002) · The Journal of Biochemistry · doi:10.1093/oxfordjournals.jbchem.a003137 · Cited by 84 · see citing works

Structural Evidence for Direct Hydride Transfer from NADH to Cytochrome P450nor

Oshima, R., Fushinobu, S., Su, F., Li, Z., Takaya, N., & Shoun, H. (2004) · Journal of Molecular Biology · doi:10.1016/j.jmb.2004.07.009 · Cited by 83 · see citing works

Identification ofHistoplasma capsulatumTranscripts Induced in Response to Reactive Nitrogen Species

Nittler, M. P., Murray, D. H., Foo, C. K., & Sil, A. (2005) · Molecular Biology of the Cell · doi:10.1091/mbc.e05-05-0434 · Cited by 80 · see citing works

Codenitrification and Denitrification Are Dual Metabolic Pathways through Which Dinitrogen Evolves from Nitrate inStreptomyces antibioticus

Kumon, Y., Sasaki, Y., Kato, I., Takaya, N., Shoun, H., & Beppu, T. (2002) · Journal of Bacteriology · doi:10.1128/jb.184.11.2963-2968.2002 · Cited by 70 · see citing works

Cytochrome P450nor, a Novel Class of Mitochondrial Cytochrome P450 Involved in Nitrate Respiration in the Fungus Fusarium oxysporum

Takaya, N., Suzuki, S., Kuwazaki, S., Shoun, H., Maruo, F., Yamaguchi, M., & Takeo, K. (1999) · Archives of Biochemistry and Biophysics · doi:10.1006/abbi.1999.1499 · Cited by 69 · see citing works

Denitrification by yeasts and occurrence of cytochrome P450nor in Trichosporon cutaneum

Tsuruta, S., Takaya, N., Zhang, L., Shoun, H., Kimura, K., Hamamoto, M., & Nakase, T. (1998) · FEMS Microbiology Letters · doi:10.1111/j.1574-6968.1998.tb13262.x · Cited by 69 · see citing works

Eukaryotic nirK Genes Encoding Copper-Containing Nitrite Reductase: Originating from the Protomitochondrion?

Kim, S.-W., Fushinobu, S., Zhou, S., Wakagi, T., & Shoun, H. (2009) · Applied and Environmental Microbiology · doi:10.1128/aem.02536-08 · Cited by 64 · see citing works

Purification and Properties of a Cyotchrome P-450 of a Fungus, Fusarium oxysporum

Shoun, H., Sudo, Y., Seto, Y., & Beppu, T. (1983) · The Journal of Biochemistry · doi:10.1093/oxfordjournals.jbchem.a134467 · Cited by 63 · see citing works

Two isozymes of P450nor of Cylindrocarpon tonkinense: Molecular cloning of the cDNAs and genes, expressions in the yeast, and the putative NAD(P)H-binding site

Kudo, T., Tomura, D., Liu, D. L., Dai, X. Q., & Shoun, H. (1996) · Biochimie · doi:10.1016/s0300-9084(97)82538-2 · Cited by 51 · see citing works

Soluble, nitrate/nitrite‐inducible cytochrome P‐450 of the fungus, Fusarium oxysporum

Shoun, H., Suyama, W., & Yasui, T. (1989) · FEBS Letters · doi:10.1016/0014-5793(89)81151-2 · Cited by 49 · see citing works

Nitric oxide reduction, the last step in denitrification by Fusarium oxysporum, is obligatorily mediated by cytochrome P450nor

Takaya, N., & Shoun, H. (2000) · Molecular and General Genetics MGG · doi:10.1007/s004380051177 · Cited by 49 · see citing works

Hybrid Respiration in the Denitrifying Mitochondria of Fusarium oxysporum

Takaya, N. (2003) · The Journal of Biochemistry · doi:10.1093/jb/mvg060 · Cited by 47 · see citing works

Soil Formate Regulates the Fungal Nitrous Oxide Emission Pathway

K., W., Farrell, R. E., & Siciliano, S. D. (2008) · Applied and Environmental Microbiology · doi:10.1128/aem.00797-08 · Cited by 45 · see citing works

A Positively Charged Cluster Formed in the Heme-distal Pocket of Cytochrome P450nor Is Essential for Interaction with NADH

Kudo, T., Takaya, N., Park, S., Shiro, Y., & Shoun, H. (2001) · Journal of Biological Chemistry · doi:10.1074/jbc.m007244200 · Cited by 43 · see citing works

N-Terminal Processing and Amino Acid Sequence of Two Isoforms of Nitric Oxide Reductase Cytochrome P450nor from Fusarium oxysporum

Nakahara, K., & Shoun, H. (1996) · The Journal of Biochemistry · doi:10.1093/oxfordjournals.jbchem.a021525 · Cited by 38 · see citing works

Denitrification of Nitrate by the FungusCylindrocarpon tonkinense

Watsuji, T., Takaya, N., Nakamura, A., & Shoun, H. (2003) · Bioscience Biotechnology and Biochemistry · doi:10.1271/bbb.67.1115 · Cited by 35 · see citing works

Multi-Energy Metabolic Mechanisms of the FungusFusarium oxysporumin Low Oxygen Environments

Zhou, Z., Takaya, N., & Shoun, H. (2010) · Bioscience Biotechnology and Biochemistry · doi:10.1271/bbb.100482 · Cited by 33 · see citing works

Nitrous Oxide-forming Codenitrification Catalyzed by Cytochrome P450nor

Su, F., Takaya, N., & Shoun, H. (2004) · Bioscience Biotechnology and Biochemistry · doi:10.1271/bbb.68.473 · Cited by 30 · see citing works

The B′ Helix Determines Cytochrome P450nor Specificity for the Electron Donors NADH and NADPH

Li, Z., Kudo, T., Takaya, N., & Shoun, H. (2002) · Journal of Biological Chemistry · doi:10.1074/jbc.m203923200 · Cited by 30 · see citing works

The Possible Involvement of Copper-Containing Nitrite Reductase (NirK) and Flavohemoglobin in Denitrification by the FungusCylindrocarpon tonkinense

Sang-Wan, K. I. M., Fushinobu, S., Zhou, S., Wakagi, T., & Shoun, H. (2010) · Bioscience Biotechnology and Biochemistry · doi:10.1271/bbb.100071 · Cited by 21 · see citing works

D88A mutant of cytochrome P450nor provides kinetic evidence for direct complex formation with electron donor NADH

Umemura, M., Su, F., Takaya, N., Shiro, Y., & Shoun, H. (2004) · European Journal of Biochemistry · doi:10.1111/j.1432-1033.2004.04206.x · Cited by 15 · see citing works

Formate-forming Fungal Catabolic Pathway to Supply Electrons to Nitrate Respiration

Kuwazaki, S., Takaya, N., Nakamura, A., & Shoun, H. (2003) · Bioscience Biotechnology and Biochemistry · doi:10.1271/bbb.67.937 · Cited by 15 · see citing works

Co-denitrification by the denitrifying system of the fungus Fusarium oxysporum

Tanimoto, T. (1992) · FEMS Microbiology Letters · doi:10.1016/0378-1097(92)90525-s · Cited by 12 · see citing works

A Possible Role of NADPH-Dependent Cytochrome P450nor Isozyme in Glycolysis under Denitrifying Conditions

Watsuji, T., Takaya, N., Nakamura, A., & Shoun, H. (2003) · Bioscience Biotechnology and Biochemistry · doi:10.1271/bbb.67.1109 · Cited by 11 · see citing works

Involvement of a Glu71–Arg64 Couple in the Access Channel for NADH in Cytochrome P450nor

Su, F., Fushinobu, S., Takaya, N., & Shoun, H. (2004) · Bioscience Biotechnology and Biochemistry · doi:10.1271/bbb.68.1156 · Cited by 8 · see citing works

Membrane-associated, dissimilatory nitrite reductase of the denitrifying fungus Cylindrocarpon tonkinense

Kubota, Y., Takaya, N., & Shoun, H. (1999) · Archives of Microbiology · doi:10.1007/s002030050701 · Cited by 7 · see citing works

The microbial nitrogen-cycling network

Kuypers, M. M. M., Marchant, H. K., & Kartal, B. (2018) · Nature Reviews Microbiology · doi:10.1038/nrmicro.2018.9 · Cited by 4,490 · see citing works

Microbial regulation of terrestrial nitrous oxide formation: understanding the biological pathways for prediction of emission rates

Hu, H., Chen, D., & He, J. (2015) · FEMS Microbiology Reviews · doi:10.1093/femsre/fuv021 · Cited by 806 · see citing works

Genomics and Ecology of Novel N2O-Reducing Microorganisms.

Hallin, S., Philippot, L., Löffler, F., Sanford, R., & Jones, C. M. (2018) · Trends in Microbiology · doi:10.1016/j.tim.2017.07.003 · Cited by 546 · see citing works

Fungal traits that drive ecosystem dynamics on land

Treseder, K. K., & Lennon, J. T. (2015) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.00001-15 · Cited by 625 · see citing works

Role of organic amendment application on greenhouse gas emission from soil

Thangarajan, R., Bolan, N. S., Tian, G., Naidu, R., & Kunhikrishnan, A. (2013) · The Science of The Total Environment · doi:10.1016/j.scitotenv.2013.01.031 · Cited by 533 · see citing works

Biological sources and sinks of nitrous oxide and strategies to mitigate emissions

THOMSON, A. J., Giannopoulos, G., Pretty, J., Baggs, E. M., & Richardson, D. J. (2012) · Philosophical Transactions of the Royal Society B Biological Sciences · doi:10.1098/rstb.2011.0415 · Cited by 512 · see citing works

The role of nitrifier denitrification in the production of nitrous oxide revisited

Wrage, N., Horn, M. A., Well, R., Müller, C., Velthof, G. L., & Oenema, O. (2018) · Soil Biology and Biochemistry · doi:10.1016/j.soilbio.2018.03.020 · Cited by 511 · see citing works

How biology handles nitrite

Maia, L. B., & Moura, J. J. G. (2014) · Chemical Reviews · doi:10.1021/cr400518y · Cited by 401 · see citing works

Reversing nitrogen fixation

Lehnert, N., Dong, H. T., Harland, J. B., Hunt, A. P., & White, C. J. (2018) · Nature Reviews Chemistry · doi:10.1038/s41570-018-0041-7 · Cited by 279 · see citing works

Structure and function of haemoglobins

Gell, D. A. (2017) · Blood Cells Molecules and Diseases · doi:10.1016/j.bcmd.2017.10.006 · Cited by 277 · see citing works

Estuarine plastisphere as an overlooked source of N2O production

Su, X., Yang, L., Yang, K., Tang, Y., Wen, T., Wang, Y., Rillig, M. C., Rohe, L., Pan, J., Li, H., et al. (2022) · Nature Communications · doi:10.1038/s41467-022-31584-x · Cited by 239 · see citing works

Applications of microbial cytochrome P450 enzymes in biotechnology and synthetic biology

Girvan, H. M., & Munro, A. W. (2016) · Current Opinion in Chemical Biology · doi:10.1016/j.cbpa.2016.02.018 · Cited by 238 · see citing works

N2O production, a widespread trait in fungi

Maeda, K., Spor, A., Edel‐Hermann, V., Heraud, C., Breuil, M., Bizouard, F., Toyoda, S., Yoshida, N., Steinberg, C., & Philippot, L. (2015) · Scientific Reports · doi:10.1038/srep09697 · Cited by 232 · see citing works

A review of soil NO transformation: Associated processes and possible physiological significance on organisms

Medinets, S., Skiba, U., Rennenberg, H., & Butterbach‐Bahl, K. (2014) · Soil Biology and Biochemistry · doi:10.1016/j.soilbio.2014.09.025 · Cited by 219 · see citing works

What makes a P450 tick?

Munro, A. W., Girvan, H. M., Mason, A. E., Dunford, A. J., & McLean, K. J. (2013) · Trends in Biochemical Sciences · doi:10.1016/j.tibs.2012.11.006 · Cited by 191 · see citing works

Enterosalivary nitrate metabolism and the microbiome: Intersection of microbial metabolism, nitric oxide and diet in cardiac and pulmonary vascular health

Koch, C. D., Gladwin, M. T., Freeman, B. A., Lundberg, J. O., Weitzberg, E., & Morris, A. (2017) · Free Radical Biology and Medicine · doi:10.1016/j.freeradbiomed.2016.12.015 · Cited by 186 · see citing works

Nitrate Storage and Dissimilatory Nitrate Reduction by Eukaryotic Microbes

Kamp, A., Høgslund, S. M., Risgaard‐Petersen, N., & Stief, P. (2015) · Frontiers in Microbiology · doi:10.3389/fmicb.2015.01492 · Cited by 172 · see citing works

Evidence for fungal and chemodenitrification based N2O flux from nitrogen impacted coastal sediments

Wankel, S. D., Ziebis, W., Buchwald, C., Charoenpong, C., de Beer, D., Dentinger, J. E., Xu, Z. Z., & Zengler, K. (2017) · Nature Communications · doi:10.1038/ncomms15595 · Cited by 165 · see citing works

Fungal Cytochrome P450s and the P450 Complement (CYPome) of Fusarium graminearum

Shin, J., Kim, J., Lee, Y., & Son, H. (2018) · Toxins · doi:10.3390/toxins10030112 · Cited by 161 · see citing works

The Long-Term Relationship between Microbial Metabolism and Greenhouse Gases

Stein, L. Y. (2020) · Trends in Microbiology · doi:10.1016/j.tim.2020.01.006 · Cited by 161 · see citing works

Functions of elements in soil microorganisms

Hemkemeyer, M., Schwalb, S. A., Heinze, S., Joergensen, R. G., & Wichern, F. (2021) · Microbiological Research · doi:10.1016/j.micres.2021.126832 · Cited by 159 · see citing works

Phylogenetic, taxonomic and functional diversity of fungal denitrifiers and associated N2O production efficacy

Mothapo, N. V., Chen, H., Cubeta, M. A., Grossman, J., Fuller, F., & Shi, W. (2015) · Soil Biology and Biochemistry · doi:10.1016/j.soilbio.2015.02.001 · Cited by 153 · see citing works

Nitrification inhibitors mitigate N2O emissions more effectively under straw-induced conditions favoring denitrification

Wu, D., Şenbayram, M., Well, R., Brüggemann, N., Pfeiffer, B., Loick, N., Stempfhuber, B., Dittert, K., & Bol, R. A. (2016) · Soil Biology and Biochemistry · doi:10.1016/j.soilbio.2016.10.022 · Cited by 144 · see citing works

A Novel Eukaryotic Denitrification Pathway in Foraminifera

Woehle, C., Roy, A.-S., Glock, N., Wein, T., Weißenbach, J., Rosenstiel, P. C., Hiebenthal, C., Michels, J., Schönfeld, J., & Dagan, T. (2018) · Current Biology · doi:10.1016/j.cub.2018.06.027 · Cited by 117 · see citing works

Fungal denitrification revisited – Recent advancements and future opportunities

Aldossari, N., & Ishii, S. (2021) · Soil Biology and Biochemistry · doi:10.1016/j.soilbio.2021.108250 · Cited by 113 · see citing works

Capturing an initial intermediate during the P450nor enzymatic reaction using time-resolved XFEL crystallography and caged-substrate

Tosha, T., Nomura, T., Nishida, T., Saeki, N., Okubayashi, K., Yamagiwa, R., Sugahara, M., Nakane, T., Yamashita, K., Hirata, K., et al. (2017) · Nature Communications · doi:10.1038/s41467-017-01702-1 · Cited by 108 · see citing works

N2O emission from cropland field soil through fungal denitrification after surface applications of organic fertilizer

Wei, W., Isobe, K., Shiratori, Y., Nishizawa, T., Ohte, N., Otsuka, S., & Senoo, K. (2013) · Soil Biology and Biochemistry · doi:10.1016/j.soilbio.2013.10.044 · Cited by 108 · see citing works

Source and reduction of nitrous oxide

Pauleta, S. R., Carepo, M. S. P., & Moura, I. (2019) · Coordination Chemistry Reviews · doi:10.1016/j.ccr.2019.02.005 · Cited by 103 · see citing works

Differences in microbial community structure and nitrogen cycling in natural and drained tropical peatland soils

Espenberg, M., Truu, M., Mander, Ü., Kasak, K., Nõlvak, H., Ligi, T., Oopkaup, K., Maddison, M., & Truu, J. (2018) · Scientific Reports · doi:10.1038/s41598-018-23032-y · Cited by 101 · see citing works

The effect of nitrification inhibitor on N2O, NO and N2 emissions under different soil moisture levels in a permanent grassland soil

Wu, D., Cardenas, L. M., Calvet, S., Brüggemann, N., Loick, N., Liu, S., & Bol, R. A. (2017) · Soil Biology and Biochemistry · doi:10.1016/j.soilbio.2017.06.007 · Cited by 100 · see citing works

Regulation of nitrous oxide production in low-oxygen waters off the coast of Peru

Frey, C., Bange, H. W., Achterberg, E. P., Jayakumar, A., Löscher, C. R., Arévalo-Martínez, D. L., León‐Palmero, E., Sun, M., Sun, X., Xie, R. C., et al. (2020) · Biogeosciences · doi:10.5194/bg-17-2263-2020 · Cited by 96 · see citing works

Dual isotope and isotopomer signatures of nitrous oxide from fungal denitrification – a pure culture study

Rohe, L., Anderson, T., Braker, G., Flessa, H., Giesemann, A., Lewicka‐Szczebak, D., Wrage, N., & Well, R. (2014) · Rapid Communications in Mass Spectrometry · doi:10.1002/rcm.6975 · Cited by 94 · see citing works

Antibiotic Effects on Microbial Communities Responsible for Denitrification and N2O Production in Grassland Soils

Semedo, M., Song, B., Sparrer, T., & Phillips, R. (2018) · Frontiers in Microbiology · doi:10.3389/fmicb.2018.02121 · Cited by 87 · see citing works

Stimulation of N 2 O emission via bacterial denitrification driven by acidification in estuarine sediments

Su, X., Wen, T., Wang, Y., Xu, J., Li, C., Zhang, J., Xue, X., Ding, K., Tang, Y., & Zhu, Y. (2021) · Global Change Biology · doi:10.1111/gcb.15863 · Cited by 86 · see citing works

Biological and Bioinspired Inorganic N–N Bond-Forming Reactions

Ferousi, C., Majer, S. H., DiMucci, I. M., & Lancaster, K. M. (2020) · Chemical Reviews · doi:10.1021/acs.chemrev.9b00629 · Cited by 84 · see citing works

Ecological and physiological implications of nitrogen oxide reduction pathways on greenhouse gas emissions in agroecosystems

Yoon, S., Song, B., Phillips, R., Chang, J., & Song, M. J. (2019) · FEMS Microbiology Ecology · doi:10.1093/femsec/fiz066 · Cited by 79 · see citing works

Fungi mediate nitrous oxide production but not ammonia oxidation in aridland soils of the southwestern US

Marusenko, Y., Huber, D. P., & Hall, S. J. (2013) · Soil Biology and Biochemistry · doi:10.1016/j.soilbio.2013.03.018 · Cited by 78 · see citing works

Organic Residue Amendments to Modulate Greenhouse Gas Emissions From Agricultural Soils

Brenzinger, K., Drost, S. M., Korthals, G. W., & Bodelier, P. L. E. (2018) · Frontiers in Microbiology · doi:10.3389/fmicb.2018.03035 · Cited by 74 · see citing works

Nutrient conversion and recovery from wastewater using electroactive bacteria

Li, N., Wan, Y., & Wang, X. (2019) · The Science of The Total Environment · doi:10.1016/j.scitotenv.2019.135690 · Cited by 73 · see citing works

Use of oxygen isotopes to differentiate between nitrous oxide produced by fungi or bacteria during denitrification

Rohe, L., Well, R., & Lewicka‐Szczebak, D. (2017) · Rapid Communications in Mass Spectrometry · doi:10.1002/rcm.7909 · Cited by 71 · see citing works

The dual function of flavodiiron proteins: oxygen and/or nitric oxide reductases

Romão, C. V., Vicente, J. B., Borges, P. T., Frazão, C., & Teixeira, M. S. (2016) · JBIC Journal of Biological Inorganic Chemistry · doi:10.1007/s00775-015-1329-4 · Cited by 70 · see citing works

Soil aggregate size modifies the impacts of fertilization on microbial communities

Li, F., Qiu, P., Shen, B., & Shen, Q. (2019) · Geoderma · doi:10.1016/j.geoderma.2019.02.039 · Cited by 69 · see citing works

Bright Side of Fusarium oxysporum: Secondary Metabolites Bioactivities and Industrial Relevance in Biotechnology and Nanotechnology

Ibrahim, S. R. M., Sirwi, A., Eid, B. G., Mohamed, S. G. A., & Mohamed, G. A. (2021) · Journal of Fungi · doi:10.3390/jof7110943 · Cited by 65 · see citing works

Nitrous oxide producing activity of diverse fungi from distinct agroecosystems

Mothapo, N. V., Chen, H., Cubeta, M. A., & Shi, W. (2013) · Soil Biology and Biochemistry · doi:10.1016/j.soilbio.2013.07.004 · Cited by 65 · see citing works

Microbial nitrous oxide emissions in dryland ecosystems: mechanisms, microbiome and mitigation

Hu, H., Trivedi, P., He, J., & Singh, B. K. (2017) · Environmental Microbiology · doi:10.1111/1462-2920.13795 · Cited by 65 · see citing works

Biological Diversity of Cytochrome P450 Redox Partner Systems

McLean, K. J., Luciakova, D., Belcher, J., Tee, K. L., & Munro, A. W. (2015) · Advances in experimental medicine and biology · doi:10.1007/978-3-319-16009-2_11 · Cited by 64 · see citing works

An evaluation of primers for detecting denitrifiers via their functional genes

Ma, Y., Zilles, J. L., & Kent, A. D. (2019) · Environmental Microbiology · doi:10.1111/1462-2920.14555 · Cited by 64 · see citing works

Ammonia-oxidizing bacteria and fungal denitrifier diversity are associated with N2O production in tropical soils

Lourenço, K. S., Costa, O. Y. A., Cantarella, H., & Kuramae, E. E. (2022) · Soil Biology and Biochemistry · doi:10.1016/j.soilbio.2022.108563 · Cited by 63 · see citing works

Detection and Diversity of Fungal Nitric Oxide Reductase Genes ( p450nor ) in Agricultural Soils

Higgins, S., Welsh, A. K., Orellana, L. H., Konstantinidis, K. T., Chee‐Sanford, J. C., Sanford, R. A., Schadt, C. W., & Löffler, F. E. (2016) · Applied and Environmental Microbiology · doi:10.1128/aem.00243-16 · Cited by 62 · see citing works

Increased Nitrogen Loading Facilitates Nitrous Oxide Production through Fungal and Chemodenitrification in Estuarine and Coastal Sediments

Li, X., Gao, D., Li, Y., Zheng, Y., Dong, H., Liang, X., Liu, M., & Hou, L. (2023) · Environmental Science & Technology · doi:10.1021/acs.est.2c06602 · Cited by 61 · see citing works

Molecular understanding of heteronuclear active sites in heme–copper oxidases, nitric oxide reductases, and sulfite reductases through biomimetic modelling

Reed, C. J., Lam, Q., Mirts, E. N., & Lu, Y. (2021) · Chemical Society Reviews · doi:10.1039/d0cs01297a · Cited by 61 · see citing works

Fungi Contribute Critical but Spatially Varying Roles in Nitrogen and Carbon Cycling in Acid Mine Drainage

Mosier, A. C., Miller, C. S., Frischkorn, K. R., Ohm, R. A., Li, Z., LaButti, K. M., Lapidus, A. L., Lipzen, A., Chen, C., Johnson, J., et al. (2016) · Frontiers in Microbiology · doi:10.3389/fmicb.2016.00238 · Cited by 60 · see citing works

Chlamydomonas reinhardtii, an Algal Model in the Nitrogen Cycle

Bellido-Pedraza, C. M., Calatrava, V., Sanz‐Luque, E., Tejada‐Jiménez, M., Llamas, Á., Plouviez, M., Guieysse, B., Fernández, E. M., & Galván, A. (2020) · Plants · doi:10.3390/plants9070903 · Cited by 59 · see citing works

The Soil Fungi

Taylor, D. L., & Sinsabaugh, R. L. (2014) · Elsevier eBooks · doi:10.1016/b978-0-12-415955-6.00004-9 · Cited by 58 · see citing works

Indications for enzymatic denitrification to N2O at low pH in an ammonia-oxidizing archaeon

Jung, M., Gwak, J.-H., Rohe, L., Giesemann, A., Kim, J., Well, R., Madsen, E. L., Herbold, C. W., Wagner, M., & Rhee, S. (2019) · The ISME Journal · doi:10.1038/s41396-019-0460-6 · Cited by 58 · see citing works

Dominance of bacterial ammonium oxidizers and fungal denitrifiers in the complex nitrogen cycle pathways related to nitrous oxide emission

Lourenço, K. S., Dimitrov, M. R., Pijl, A. S., Soares, J. R., do Carmo, J. B., van Veen, J. A., Cantarella, H., & Kuramae, E. E. (2018) · GCB Bioenergy · doi:10.1111/gcbb.12519 · Cited by 57 · see citing works

The conversion of subtropical forest to tea plantation changes the fungal community and the contribution of fungi to N2O production

Zheng, N., Yu, Y., Wang, J., Chapman, S. J., Yao, H., & Zhang, Y. (2020) · Environmental Pollution · doi:10.1016/j.envpol.2020.115106 · Cited by 53 · see citing works

Lime-nitrogen application affects nitrification, denitrification, and N2O emission in an acidic tea soil

Yamamoto, A., Akiyama, H., Naokawa, T., Miyazaki, Y., Honda, Y., Sano, Y., Nakajima, Y., & Yagi, K. (2013) · Biology and Fertility of Soils · doi:10.1007/s00374-013-0830-6 · Cited by 53 · see citing works

Rational and semi-rational engineering of cytochrome P450s for biotechnological applications

Xu, L., & Du, Y. (2018) · Synthetic and Systems Biotechnology · doi:10.1016/j.synbio.2018.10.001 · Cited by 53 · see citing works

Effects of organic matter and low oxygen on the mycobenthos in a coastal lagoon

Ortega-Arbulú, A.-S., Pichler, M., Vuillemin, A., & Orsi, W. D. (2018) · Environmental Microbiology · doi:10.1111/1462-2920.14469 · Cited by 52 · see citing works

An electrogenic nitric oxide reductase

Al-Attar, S., & de Vries, S. (2015) · FEBS Letters · doi:10.1016/j.febslet.2015.06.033 · Cited by 51 · see citing works

Detection and diversity of copper containing nitrite reductase genes (nirK) in prokaryotic and fungal communities of agricultural soils

Long, A., Song, B., Fridey, K., & Silva, A. (2014) · FEMS Microbiology Ecology · doi:10.1093/femsec/fiu004 · Cited by 49 · see citing works

Phylogenomics Reveal the Dynamic Evolution of Fungal Nitric Oxide Reductases and Their Relationship to Secondary Metabolism

Higgins, S., Schadt, C., Matheny, P. B., & Löffler, F. (2018) · Genome Biology and Evolution · doi:10.1093/gbe/evy187 · Cited by 45 · see citing works

Urea-based nitrogen fertilization in agriculture: a key source of N 2 O emissions and recent development in mitigating strategies

Zhang, Y., Wang, W., & Yao, H. (2022) · Archives of Agronomy and Soil Science · doi:10.1080/03650340.2022.2025588 · Cited by 51 · see citing works

Genome Sequence, Comparative Analysis, and Evolutionary Insights into Chitinases of Entomopathogenic Fungus Hirsutella thompsonii

Agrawal, Y., Khatri, I., Subramanian, S., & Shenoy, B. D. (2015) · Genome Biology and Evolution · doi:10.1093/gbe/evv037 · Cited by 45 · see citing works

The biosynthesis of nitrous oxide in the green alga Chlamydomonas reinhardtii

Plouviez, M., Wheeler, D., Shilton, A. N., Packer, M. A., McLenachan, P. A., Sanz‐Luque, E., Ocaña‐Calahorro, F. J., Fernández, E. M., & Guieysse, B. (2017) · The Plant Journal · doi:10.1111/tpj.13544 · Cited by 46 · see citing works

Efficacy of zero nitrous oxide emitting aerobic denitrifying bacterium, Methylobacterium gregans DC-1 in nitrate removal with strong auto-aggregation property

Hong, P., Shu, Y., Wu, X., Wang, C., Tian, C., Wu, H., Donde, O. O., & Xiao, B. (2019) · Bioresource Technology · doi:10.1016/j.biortech.2019.122083 · Cited by 45 · see citing works

Response of the denitrifier community and its relationship with multiple N2O emission peaks after mature compost addition into dairy manure compost with forced aeration

Maeda, K., Miyatake, F., Asano, R., Nakajima, K., Maeda, T., & Iwabuchi, K. (2018) · Chemosphere · doi:10.1016/j.chemosphere.2018.04.169 · Cited by 43 · see citing works

Characterization of Fungal nirK-Containing Communities and N2O Emission From Fungal Denitrification in Arable Soils

Xu, H., Sheng, R., Xing, X., Zhang, W., Hou, H., Liu, Y., Qin, H., Chen, C., & Wei, W. (2019) · Frontiers in Microbiology · doi:10.3389/fmicb.2019.00117 · Cited by 43 · see citing works

Denitrification Aligns with N2 Fixation in Red Sea Corals

Tilstra, A., El-Khaled, Y. C., Roth, F., Rädecker, N., Pogoreutz, C., Voolstra, C. R., & Wild, C. (2019) · Scientific Reports · doi:10.1038/s41598-019-55408-z · Cited by 43 · see citing works

Enhanced Nitrous Oxide Production in Denitrifying Dechloromonas aromatica Strain RCB Under Salt or Alkaline Stress Conditions

Han, H., Song, B., Song, M. J., & Yoon, S. (2019) · Frontiers in Microbiology · doi:10.3389/fmicb.2019.01203 · Cited by 42 · see citing works

Potential denitrification activity response to long-term nitrogen fertilization - A global meta-analysis

Li, L., Yang, M., Li, J., Bol, R. A., Du, Z., & Wu, D. (2022) · Journal of Cleaner Production · doi:10.1016/j.jclepro.2022.130451 · Cited by 42 · see citing works

From cultivation to cancer: formation of N -nitrosamines and other carcinogens in smokeless tobacco and their mutagenic implications

Stanfill, S. B., Hecht, S. S., Joerger, A. C., González, P. J., Maia, L. B., Rivas, M. G., Moura, J. J. G., Gupta, A., Brun, N. E. L., Crack, J. C., et al. (2023) · Critical Reviews in Toxicology · doi:10.1080/10408444.2023.2264327 · Cited by 44 · see citing works

Short-lived intermediate in N 2 O generation by P450 NO reductase captured by time-resolved IR spectroscopy and XFEL crystallography

Nomura, T., Kimura, T., Kanematsu, Y., Yamada, D., Yamashita, K., Hirata, K., Ueno, G., Murakami, H., Hisano, T., Yamagiwa, R., et al. (2021) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2101481118 · Cited by 41 · see citing works

NO and N 2 O transformations of diverse fungi in hypoxia: evidence for anaerobic respiration only in Fusarium strains

Keuschnig, C., Gorfer, M., Li, G., Mania, D., Frostegård, Å., Bakken, L. R., & Larose, C. (2020) · Environmental Microbiology · doi:10.1111/1462-2920.14980 · Cited by 40 · see citing works

A microbial eukaryote with a unique combination of purple bacteria and green algae as endosymbionts

Muñoz-Gómez, S. A., Kreutz, M., & Hess, S. (2021) · Science Advances · doi:10.1126/sciadv.abg4102 · Cited by 40 · see citing works

Rhizosphere processes in nitrate-rich barley soil tripled both N2O and N2 losses due to enhanced bacterial and fungal denitrification

Şenbayram, M., Well, R., Shan, J., Bol, R. A., Burkart, S., Jones, D. L., & Wu, D. (2020) · Plant and Soil · doi:10.1007/s11104-020-04457-9 · Cited by 39 · see citing works

Time-resolved studies of metalloproteins using X-ray free electron laser radiation at SACLA

Suga, M., Shimada, A., Akita, F., Shen, J., Tosha, T., & Sugimoto, H. (2019) · Biochimica et Biophysica Acta (BBA) - General Subjects · doi:10.1016/j.bbagen.2019.129466 · Cited by 38 · see citing works

Bioaugmentation of a wastewater bioreactor system with the nitrous oxide-reducing denitrifier Pseudomonas stutzeri strain TR2

Ikeda‐Ohtsubo, W., Miyahara, M., Kim, S.-W., Yamada, T., Matsuoka, M., Watanabe, A., Fushinobu, S., Wakagi, T., Shoun, H., Miyauchi, K., et al. (2012) · Journal of Bioscience and Bioengineering · doi:10.1016/j.jbiosc.2012.08.015 · Cited by 38 · see citing works

Impact of mowing management on nitrogen mineralization rate and fungal and bacterial communities in a semiarid grassland ecosystem

Li, J., Zhang, Q., Li, Y., Liu, J., Pan, H., Guan, X., Xu, X., Xu, J. M., & Di, H. (2016) · Journal of Soils and Sediments · doi:10.1007/s11368-016-1620-1 · Cited by 37 · see citing works

Discovery of Fungal Denitrification Inhibitors by Targeting Copper Nitrite Reductase from Fusarium oxysporum

Matsuoka, M., Kumar, A., Muddassar, M., Matsuyama, A., Yoshida, M., & Zhang, K. Y. J. (2017) · Journal of Chemical Information and Modeling · doi:10.1021/acs.jcim.6b00649 · Cited by 37 · see citing works

Belowground Defence Strategies in Plants

Steinberg, C., Lecomte, C., Alabouvette, C., & Edel‐Hermann, V. (2016) · Signaling and communication in plants · doi:10.1007/978-3-319-42319-7 · Cited by 36 · see citing works

Glycerine as a carbon source in nitrite removal and sludge production

Bernat, K., Kulikowska, D., & Żuchniewski, K. (2015) · Chemical Engineering Journal · doi:10.1016/j.cej.2014.12.096 · Cited by 35 · see citing works

Biotic nitrosation of diclofenac in a soil aquifer system (Katari watershed, Bolivia)

Chirón, S., & Duwig, C. (2016) · The Science of The Total Environment · doi:10.1016/j.scitotenv.2016.05.048 · Cited by 35 · see citing works

Temperature effects on N 2 O and N 2 denitrification end‐products for a New Zealand pasture soil

Phillips, R., McMillan, A. M. S., Palmada, T., Dando, J., & Giltrap, D. L. (2014) · New Zealand Journal of Agricultural Research · doi:10.1080/00288233.2014.969380 · Cited by 36 · see citing works

Preussia sp. BSL-10 producing nitric oxide, gibberellins, and indole acetic acid and improving rice plant growth

Al-Hosni, K., Shahzad, R., Khan, A. L., Imran, Q. M., Al‐Harrasi, A., Rawahi, A. A., Asaf, S., Kang, S., Yun, B., & Lee, I. (2018) · Journal of Plant Interactions · doi:10.1080/17429145.2018.1432773 · Cited by 34 · see citing works

The importance of denitrification performed by nitrogen-fixing bacteria used as inoculants in South America

Zilli, J. É., Alves, B. J. R., Rouws, L. F. M., Simões‐Araújo, J. L., Soares, L. H. D. B., Cassán, F., Castellanos, M. O., & O’Hara, G. W. (2019) · Plant and Soil · doi:10.1007/s11104-019-04187-7 · Cited by 33 · see citing works

Copper(I) Complex Mediated Nitric Oxide Reductive Coupling: Ligand Hydrogen Bonding Derived Proton Transfer Promotes N2O(g) Release

Wijeratne, G. B., Bhadra, M., Siegler, M. A., & Karlin, K. D. (2019) · Journal of the American Chemical Society · doi:10.1021/jacs.9b07286 · Cited by 33 · see citing works

Nitrogen removal from synthetic wastewater using single and mixed culture systems of denitrifying fungi, bacteria, and actinobacteria

Wang, W., Cao, L., Tan, H., & Zhang, R. (2016) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-016-7800-5 · Cited by 33 · see citing works

Microbial Cytochromes P450

McLean, K. J., Leys, D., & Munro, A. W. (2015) · Springer eBooks · doi:10.1007/978-3-319-12108-6_6 · Cited by 35 · see citing works

Fungi in soil: a rich community with diverse functions

Taylor, D. L., & Bhatnagar, J. M. (2024) · Elsevier eBooks · doi:10.1016/b978-0-12-822941-5.00004-1 · Cited by 32 · see citing works

Detection of N2O-producing fungi in environment using nitrite reductase gene (nirK)-targeting primers

Chen, H., Fang-Bo, Y., & Shi, W. (2016) · Fungal Biology · doi:10.1016/j.funbio.2016.07.012 · Cited by 32 · see citing works

Denitrifiers in the surface zone are primarily responsible for the nitrous oxide emission of dairy manure compost

Maeda, K., Toyoda, S., Hanajima, D., & Yoshida, N. (2013) · Journal of Hazardous Materials · doi:10.1016/j.jhazmat.2013.01.041 · Cited by 31 · see citing works

Nutrient Enrichment Alters Salt Marsh Fungal Communities and Promotes Putative Fungal Denitrifiers

Kearns, P. J., Bulseco, A., Hoyt, H., Angell, J. H., & Bowen, J. L. (2018) · Microbial Ecology · doi:10.1007/s00248-018-1223-z · Cited by 31 · see citing works

Microbial potential for denitrification in the hyperarid Atacama Desert soils

Wu, D., Şenbayram, M., Moradi, G., Mörchen, R., Knief, C., Klumpp, E., Jones, D. L., Well, R., Chen, R., & Bol, R. A. (2021) · Soil Biology and Biochemistry · doi:10.1016/j.soilbio.2021.108248 · Cited by 31 · see citing works

Denitrification and N2O Emission in Estuarine Sediments in Response to Ocean Acidification: From Process to Mechanism

Su, X., Li, C., Tang, Y., Wen, T., Yang, K., Wang, Y., Zhang, J., Zhu, G., Yang, X., Hou, L., et al. (2022) · Environmental Science & Technology · doi:10.1021/acs.est.2c03550 · Cited by 31 · see citing works

Minimizing Tillage Modifies Fungal Denitrifier Communities, Increases Denitrification Rates and Enhances the Genetic Potential for Fungal Relative to Bacterial Denitrification

Bösch, Y., Jones, C. M., Finlay, R. D., Karlsson, M., Larsbo, M., Keller, T., & Hallin, S. (2022) · Soil Biology and Biochemistry · doi:10.1016/j.soilbio.2022.108718 · Cited by 29 · see citing works

Chemical formation of hybrid di-nitrogen calls fungal codenitrification into question

Phillips, R., Song, B., McMillan, A. M. S., Grelet, G., Weir, B. S., Palmada, T., & Tobias, C. (2016) · Scientific Reports · doi:10.1038/srep39077 · Cited by 30 · see citing works

Comparing modified substrate-induced respiration with selective inhibition (SIRIN) and N 2 O isotope approaches to estimate fungal contribution to denitrification in three arable soils under anoxic conditions

Rohe, L., Anderson, T., Flessa, H., Goeske, A., Lewicka‐Szczebak, D., Wrage, N., & Well, R. (2021) · Biogeosciences · doi:10.5194/bg-18-4629-2021 · Cited by 30 · see citing works

CHAPTER 14. Denitrification in Fungi

Hirofumi, S., & Fushinobu, S. (2016) · RSC metallobiology · doi:10.1039/9781782623762-00331 · Cited by 2 · see citing works

Purification and Functional Analysis of Fungal Nitric Oxide Reductase Cytochrome P450nor

Li, Z., & Shoun, H. (2008) · Methods in enzymology on CD-ROM/Methods in enzymology · doi:10.1016/s0076-6879(07)37007-9 · Cited by 10 · see citing works

Eukaryotic nirK Genes Encoding Copper-Containing Nitrite Reductase: Originating from the Protomitochondrion?

Kim, S.-W., Fushinobu, S., Zhou, S., Wakagi, T., & Shoun, H. (2009) · Applied and Environmental Microbiology · doi:10.1128/aem.02536-08 · Cited by 64 · see citing works

Phylogenomics Reveal the Dynamic Evolution of Fungal Nitric Oxide Reductases and Their Relationship to Secondary Metabolism

Higgins, S., Schadt, C., Matheny, P. B., & Löffler, F. (2018) · Genome Biology and Evolution · doi:10.1093/gbe/evy187 · Cited by 45 · see citing works

Distribution, structure and function of fungal nitric oxide reductase P450nor—recent advances

Zhang, L., Kudo, T., Takaya, N., & Shoun, H. (2002) · International Congress Series · doi:10.1016/s0531-5131(02)00369-2 · Cited by 8 · see citing works