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Cyclic nucleotide-induced superhelical structure activates a bacterial TIR immune effector
Open accessPreprint — published as 10.1038/s41586-022-05070-9 · Paper page
Abstract
Cyclic nucleotide signalling is a key component of anti-viral defence in all domains of life, from bacteria to humans. Viral detection activates a nucleotide cyclase to generate a second messenger, resulting in activation of effector proteins. This is exemplified by the metazoan cGAS-STING innate immunity pathway 1 , which originated in bacteria 2 . These defence systems require a sensor domain such as STING or SAVED to bind the cyclic nucleotide, coupled with an effector domain that causes cell death when activated by destroying essential biomolecules 3 . One example is the TIR (Toll/interleukin-1 receptor) domain, which degrades the essential cofactor NAD + when activated in response to pathogen invasion in plants and bacteria 2,4,5 or during nerve cell programmed death 6 . Here, we show that a bacterial anti-viral defence system generates a cyclic tri-adenylate (cA 3 ) signal which binds to a TIR-SAVED effector, acting as the “glue” to allow assembly of an extended superhelical solenoid structure. Adjacent TIR subunits interact to organise and complete a composite active site, allowing NAD + degradation. Our study illuminates a striking example of large-scale molecular assembly controlled by cyclic nucleotides and reveals key details of the mechanism of TIR enzyme activation.
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Highly accurate protein structure prediction with AlphaFold
Jumper, J., Evans, R., Pritzel, A., Green, T., Figurnov, M., Ronneberger, O., Tunyasuvunakool, K., Bates, R., Žídek, A., Potapenko, A., et al. (2021) · Nature · doi:10.1038/s41586-021-03819-2 · Cited by 43,764
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Metadata
- Authors
- Hogrel, G., Guild, A., Graham, S., Rickman, H., Grüschow, S., Bertrand, Q., Spagnolo, L., & White, M. F.
- Affiliations
- University of St Andrews (GB)
- MRC Centre for Regenerative Medicine (GB)
- Centre National de la Recherche Scientifique (FR)
- University of Glasgow (GB)
- Corresponding author
- Spagnolo, Laura
- White, Malcolm F
- Venue
- Nature
- Publisher
- openRxiv
- Published
- 2022-05-04
- Volume
- 608
- Issue
- 7924
- Pages
- 808-812
- ISSN
- 0028-0836 (ISSN-L)
- OpenAlex
- W4291020693
- Cited by
- 129
- References
- 1
- Citations by year
- 2026: 23 · 2025: 30 · 2024: 33 · 2023: 32 · 2022: 11
- FWCI
- 10.12
- Type
- journal article
- Language
- en
- Open access
- green
- doi.org
- Licence
- cc-by
- Locations
- Nature (publishedVersion)
- bioRxiv (Cold Spring Harbor Laboratory) (acceptedVersion, cc-by)
- PubMed (publishedVersion)
- ENLIGHTEN (Jurnal Bimbingan dan Konseling Islam) (acceptedVersion, cc-by-sa)
- DORA PSI (Paul Scherrer Institute) (submittedVersion, other-oa)
- RePEc: Research Papers in Economics (submittedVersion)
- St Andrews Research Repository (St Andrews Research Repository) (submittedVersion, cc-by)
- Funders
- Agence Nationale de la Recherche (UAR 3518 CNRS-CEA-UGA-EMBL, ANR-17-EURE-0003, ANR-17-EURE-, ANR-17, ANR-10, ANR-10-INBS-0005)
- Centre National de la Recherche Scientifique (ANR‐17‐EURE‐0003, UAR 3518 CNRS-CEA-UGA-EMBL)
- French Infrastructure for Integrated Structural Biology (ANR-17-EURE-0003, ANR-10-INBS-0005, ANR-10-INBS-000502, ANR-10-INBS)
- Medical Research Council (MC_PC_17135)
- Biotechnology and Biological Sciences Research Council (BB/S000313, BB/S000313/1, BB/T004789, BB/T004789/1, MC_PC_17135, UAR 3518 CNRS-CEA-UGA-EMBL, H17007)
- H2020 European Research Council (101018608)
- Topics
- Life Sciences › Immunology and Microbiology › Immunology › Immune Response and Inflammation
- Life Sciences › Immunology and Microbiology › Immunology › interferon and immune responses
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Bacterial Genetics and Biotechnology
- Keywords
- TIR domain, NAD+ degradation, filament assembly, innate immunity, cGAS
- MeSH terms
- Animals, Antiviral Agents, Bacteria, Bacterial Proteins, NAD, Nucleotides, Cyclic, Second Messenger Systems, Receptors, Interleukin-1, Toll-Like Receptors
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