PreprintCited by 86Photosynthetic Processes and MechanismsAdvanced Electron Microscopy Techniques and ApplicationsATP Synthase and ATPases Research

The DOI matches its Crossref record; 1 of the 1 references it cites were found in a registry or an index.

Architecture of chloroplast TOC-TIC translocon supercomplex

Open access

Preprint — published as 10.1038/s41586-023-05744-y

Abstract

Summary: Chloroplasts rely on the translocon complexes in the outer and inner envelope membranes (termed TOC and TIC, respectively) to import thousands of different nuclear-encoded proteins from the cytosol 1–4 . While previous studies indicated that the TOC and TIC complexes may assemble into larger supercomplexes 5–7 , the overall architectures of the TOC-TIC supercomplexes and the mechanism of preprotein translocation are elusive. Here we report the cryo-electron microscopy (cryo-EM) structure of the TOC-TIC supercomplex from Chlamydomonas reinhardtii at an overall resolution of 2.8 Å. The major subunits of the TOC complex (Toc75, Toc90 and Toc34) and TIC complex (Tic214, Tic20, Tic100 and Tic56), three chloroplast translocon-associated proteins (Ctap3, Ctap4 and Ctap5) and three newly-identified small inner-membrane proteins (Simp1-3) have been located in the supercomplex. As the largest protein, Tic214 traverses the inner membrane, the intermembrane space and the outer membrane, connecting the TOC complex with the TIC proteins. An inositol hexaphosphate (InsP6 or I6P) molecule is located at the Tic214-Toc90 interface and stabilizes their assembly. Moreover, four lipid molecules are located within or above an inner-membrane funnel formed by Tic214, Tic20, Simp1 and Ctap5. Furthermore, multiple potential pathways found in the TOC-TIC supercomplex may support translocation of different substrate preproteins into chloroplasts.

Overview

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1101/2022.11.20.517165

Cites

1 of 1 references verified0 citation errors · 0 not checkable

Statistics

Verification

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Citations

Cites

Research works printed but not linked: 49

  1. 10.1038/nrm1333 · DOI
  2. 10.1093/jxb/erz517 · DOI
  3. 10.1146/annurev-arplant-042809-112222 · DOI
  4. 10.1016/j.bbamcr.2012.10.002 · DOI
  5. 10.1126/science.1229262 · DOI
  6. 10.1111/tpj.13643 · DOI
  7. 10.1073/pnas.2014294117 · DOI
  8. Rochaix, J.-D. Chloroplast protein import machinery and quality control. FEBS J., doi:https://doi.org/10.1111/febs.16464 (2022). · DOI
  9. 10.1093/pcp/pcy083 · DOI
  10. 10.1105/tpc.108.063552 · DOI
  11. 10.1093/emboj/16.24.7351 · DOI
  12. 10.1083/jcb.200210060 · DOI
  13. 10.1073/pnas.1621179114 · DOI
  14. 10.1093/mp/ssq071 · DOI
  15. 10.1023/B:PLAN.0000036374.92546.51 · DOI
  16. 10.1016/j.bbapap.2019.01.002 · DOI
  17. 10.1093/jxb/ern283 · DOI
  18. 2021, Inositol polyphosphates and target of rapamycin kinase signalling govern photosystem II protein phosphorylation and photosynthetic function under light stress in Chlamydomonas, New Phytol., 232, 2011, 10.1111/nph.17741 · DOI
  19. 2020, Identity and functions of inorganic and inositol polyphosphates in plants, New Phytol., 225, 637, 10.1111/nph.16129 · DOI
  20. 10.1007/s004380050368 · DOI
  21. 10.1046/j.1365-313x.2000.00722.x · DOI
  22. 10.1101/2022.01.18.476798 · DOI
  23. 10.1104/pp.114.255562 · DOI
  24. 10.1083/jcb.139.7.1677 · DOI
  25. 10.1105/tpc.010336 · DOI
  26. 10.1093/pcp/pcr010 · DOI
  27. 10.1038/nature17163 · DOI
  28. 10.1111/j.1742-4658.2007.06023.x · DOI
  29. 10.1073/pnas.172390399 · DOI
  30. 10.1093/pcp/pcj002 · DOI
  31. 10.1186/1471-2229-11-133 · DOI
  32. 10.1016/S0006-3495(02)75216-8 · DOI
  33. 10.1038/s41586-018-0713-y · DOI
  34. 10.1093/emboj/21.11.2616 · DOI
  35. 10.1105/tpc.18.00427 · DOI
  36. 10.1105/tpc.18.00357 · DOI
  37. 10.1016/j.cell.2017.08.044 · DOI
  38. 10.1111/j.1365-313X.2011.04537.x · DOI
  39. 10.1038/nprot.2006.62 · DOI
  40. 10.1016/j.jsb.2019.09.013 · DOI
  41. 10.1038/nmeth.4169 · DOI · Paper page
  42. 10.1038/s41592-020-00990-8 · DOI
  43. 10.1042/BCJ20210708 · DOI
  44. 10.1002/pro.3943 · DOI
  45. 10.1002/jcc.20084 · DOI
  46. 10.1107/S0907444910007493 · DOI · Paper page
  47. 10.1107/S0907444909029436 · DOI
  48. 10.1107/s2059798318006551 · DOI
  49. 10.1093/bioinformatics/bty386 · DOI

Metadata

Authors
Liu, H., Li, A., Rochaix, J.-D., & Liu, Z.
Affiliations
  • Chinese Academy of Sciences (CN)
  • University of Geneva (CH)
Corresponding author
Liu, Zhenfeng
Venue
Nature
Publisher
openRxiv
Published
2022-11-20
Volume
615
Issue
7951
Pages
349-357
ISSN
0028-0836 (ISSN-L)
OpenAlex
W4318071599
Cited by
86
References
1
Citations by year
2026: 23 · 2025: 24 · 2024: 22 · 2023: 17
FWCI
7.64
Type
journal article
Language
en
Open access
Licence
cc-by-nc-nd
Locations
  • Nature (publishedVersion)
  • bioRxiv (Cold Spring Harbor Laboratory) (acceptedVersion, cc-by-nc-nd)
  • PubMed (publishedVersion)
  • RePEc: Research Papers in Economics (submittedVersion)
Funders
  • National Natural Science Foundation of China (31925024, YSBR-015)
  • Chinese Academy of Sciences (XDB37020101, YSBR‐015)
  • Institute of Biophysics, Chinese Academy of Sciences
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Photosynthetic Processes and Mechanisms
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Structural Biology › Advanced Electron Microscopy Techniques and Applications
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › ATP Synthase and ATPases Research
Keywords
Toc75, phytic acid, preprotein translocation, Chlamydomonas reinhardtii, chloroplast envelope
MeSH terms
Chloroplasts, Phytic Acid, Substrate Specificity, Chlamydomonas reinhardtii, Cryoelectron Microscopy, Protein Subunits, Protein Transport, Multiprotein Complexes, Protein Stability

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review