PreprintCited by 17Polysaccharides and Plant Cell WallsPlant Reproductive BiologyPlant Surface Properties and Treatments

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A putative rhamnogalacturonan-II CMP-β-Kdo transferase identified using CRISPR/Cas9 gene edited callus to circumvent embryo lethality

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Preprint — published as 10.1093/plphys/kiae259

Abstract

Rhamnogalacturonan II (RG-II) is a structurally complex and conserved domain of the pectin present in the primary cell walls of vascular plants. Borate crosslinking of RG-II is required for plants to grow and develop normally. Mutations that alter RG-II structure also affect crosslinking and are lethal or severely impair growth. Thus, few genes involved in RG-II synthesis have been identified. Here we developed a method using CRISPR/Cas9-mediated gene to generate callus carrying loss-of-function mutations in the MPG2 gene that encodes a putative family GT29 glycosyltransferase. Plants homozygous for this mutation do not survive. We show that in the callus mutant cell walls, RG-II does not crosslink normally because it lacks 3-deoxy-D-manno- octulosonic acid (Kdo) and thus cannot form the α-L-Rha p -(1→5)-α-D-kdo p -(1→ sidechain. We suggest that MGP2 encodes an inverting CMP-β -K do transferase (RCKT1). Our discovery provides further insight into the role of sidechains in RG-II dimerization.

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Metadata

Authors
Zhang, Y., Sharma, D., Liang, Y., Downs, N., Dolman, F., Thorne, K., Black, I. M., Pereira, J. H., Adams, P., Scheller, H. V., O’Neill, M., Urbanowicz, B., & Mortimer, J. C.
Affiliations
  • Lawrence Berkeley National Laboratory (US)
  • University of Georgia (US)
  • The University of Adelaide (AU)
Corresponding author
  • Urbanowicz, Breeanna
  • Mortimer, Jenny C.
Venue
PLANT PHYSIOLOGY
Publisher
openRxiv
Published
2023-11-16
Volume
195
Issue
4
Pages
2551-2565
ISSN
0032-0889 (ISSN-L)
OpenAlex
W4396853674
Cited by
17
References
1
Citations by year
2026: 11 · 2025: 4 · 2024: 2
FWCI
4.13
Type
journal article
Language
en
Open access
Licence
cc-by
Locations
  • PLANT PHYSIOLOGY (publishedVersion, cc-by)
  • bioRxiv (Cold Spring Harbor Laboratory) (acceptedVersion)
  • PubMed Central (publishedVersion, cc-by)
  • PubMed (publishedVersion)
  • eScholarship (California Digital Library) (submittedVersion, cc-by)
  • OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information) (submittedVersion)
Funders
  • U.S. Department of Energy (-AC02-05CH11231, 05CH11231, DE AC02 05CH11231, DESC0008472, DESC0015662, DE-AC02-)
  • University of Georgia
  • University of Adelaide
  • Office of Science (DEAC02–05CH11231, AC02-05CH11231, DE-AC02, 05CH11231, DESC0015662, DESC0008472)
  • Basic Energy Sciences (DE-SC0008472, DE-AC02, 05CH11231, DE-AC02-05CH11231., AC02–05CH11231, DE- SC0015662)
  • Biological and Environmental Research (05CH11231, DE-AC02 − 05CH11231, AC02-05CH11231)
  • Lawrence Berkeley National Laboratory (AC02‐05CH11231, DE-AC02-05CH11231, 05CH11231)
Topics
  • Life Sciences › Agricultural and Biological Sciences › Plant Science › Polysaccharides and Plant Cell Walls
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Plant Reproductive Biology
  • Life Sciences › Agricultural and Biological Sciences › Plant Science › Plant Surface Properties and Treatments
Keywords
rhamnogalacturonan II, pectin biosynthesis, glycosyltransferases, borate crosslinking, CRISPR/Cas9, loss-of-function mutants, Arabidopsis thaliana, cell wall, embryonic lethality
MeSH terms
Gene Editing, Cell Wall, Mutation, Pectins, Seeds, Glycosyltransferases, Arabidopsis, Arabidopsis Proteins, CRISPR-Cas Systems

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