PreprintCited by 12Heat shock proteins researchProtein Structure and DynamicsAdvanced NMR Techniques and Applications

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Capturing the Conformational Heterogeneity of HSPB1 Chaperone Oligomers at Atomic Resolution

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Preprint — published as 10.1021/jacs.4c18668 · Paper page

Abstract

Small heat shock proteins (sHSPs), including HSPB1, are essential regulators of cellular proteostasis that interact with unfolded and partially folded proteins to prevent aberrant misfolding and aggregation. These proteins fulfill a similar role in biological condensates, where they interact with intrinsically disordered proteins to modulate their liquid-liquid and liquid-to-solid phase transitions. Characterizing sHSP structure, dynamics, and client interactions is challenging due to their partially disordered nature, their tendency to form polydisperse oligomers, and their diverse range of clients. In this work, we leverage various biophysical methods, including fast 1 H-based magic angle spinning (MAS) NMR spectroscopy, molecular dynamics (MD) simulations and modeling, to shed new light on the structure and dynamics of HSPB1 oligomers. Using split-intein mediated segmental labeling, we provide unambiguous evidence that in the oligomer context the N-terminal domain (NTD) of HSPB1 is rigid and adopts an ensemble of heterogenous conformations, the α-crystallin domain (ACD) forms dimers and experiences multiple distinct local environments, while the C-terminal domain (CTD) remains highly dynamic. Our computational models suggest that the NTDs participate in extensive NTD-NTD and NTD-ACD interactions and are sequestered within the oligomer interior. We further demonstrate that HSPB1 higher order oligomers disassemble into smaller oligomeric species in the presence of a client protein and that an accessible NTD is essential for HSPB1 partitioning into condensates and interactions with client proteins. Our integrated approach provides a high-resolution view of the complex oligomeric landscape of HSPB1 and sheds light on the elusive network of interactions that underly HSPB1 function in biological condensates. Significance statement: HSPB1 is a ubiquitous cellular chaperone that helps prevent the aberrant aggregation of intrinsically disordered proteins involved in biological condensates and neurodegenerative diseases. Despite its central role in this process, many aspects of HSPB1’s structure and interactions with clients are not well understood due to its tendency to form polydisperse oligomeric structures and to function in heterogeneous condensate environments. Here, we present an integrated approach that includes segmental labeling, fast MAS NMR spectroscopy, and computational tools to characterize the structure and dynamics of HSPB1 in its oligomeric form and within client condensates at high resolution. Our approach, which is applicable to other complex biological systems, highlights the important role of HSPB1’s N-terminal domain in oligomeric assembly and interactions with clients.

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Metadata

Authors
Berkeley, R. F., Plonski, A. P., Phan, T., Grohe, K., Becker, L., Wegner, S., Herzik, M. A., Mittal, J., & Debelouchina, G. T.
Affiliations
  • University of California San Diego (US)
  • Texas A&M University (US)
Corresponding author
  • Mittal, Jeetain
  • Debelouchina, Galia T.
Venue
Journal of the American Chemical Society
Publisher
openRxiv
Published
2024-12-20
Volume
147
Issue
18
Pages
15181-15194
ISSN
0002-7863 (ISSN-L)
OpenAlex
W4408903648
Cited by
12
References
3
Citations by year
2026: 7 · 2025: 5
FWCI
3.58
Type
journal article
Language
en
Open access
Locations
  • Journal of the American Chemical Society (publishedVersion, cc-by)
  • bioRxiv (Cold Spring Harbor Laboratory) (acceptedVersion, cc-by-nc-nd)
  • PubMed Central (publishedVersion, cc-by)
  • PubMed (publishedVersion)
Funders
  • National Institutes of Health (CA030199)
  • University of California, San Diego (P30 NS047101)
  • High Performance Research Computing, Texas A and M University
  • National Cancer Institute (P30CA030199)
  • National Institute of General Medical Sciences (R35GM138206, R35GM138382, R35GM153388, T32GM139795)
  • National Institute of Neurological Disorders and Stroke (P30NS047101)
  • School of Medicine, University of California, San Diego
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Heat shock proteins research
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protein Structure and Dynamics
  • Physical Sciences › Chemistry › Spectroscopy › Advanced NMR Techniques and Applications
Keywords
HSPB1, small heat shock proteins, conformational heterogeneity, N-terminal domain, alpha-crystallin domain, C-terminal domain, liquid-liquid phase separation, intrinsically disordered proteins, proteostasis, magic angle spinning NMR
MeSH terms
Heat-Shock Proteins, Humans, Protein Conformation, Molecular Chaperones, Nuclear Magnetic Resonance, Biomolecular, Protein Multimerization, Molecular Dynamics Simulation

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