PreprintCited by 98RNA and protein synthesis mechanismsNeurogenetic and Muscular Disorders ResearchAmyotrophic Lateral Sclerosis Research

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SMN-primed ribosomes modulate the translation of transcripts related to Spinal Muscular Atrophy

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Lauria, F, Bernabò, P, Tebaldi, T, Groen, EJN, Perenthaler, E, Clamer, M, Maniscalco, F, Marchioretto, M, Orri, Julia, Dalla Serra, M, Inga, A, Quattrone, A, Gillingwater, TH, Viero, G·2019·Nature Cell Biology

Preprint — published as 10.1038/s41556-020-00577-7 · Paper page

Abstract

The contribution of ribosome heterogeneity and ribosome-associated factors to the molecular control of proteomes in health and disease remains enigmatic. We demonstrate that Survival Motor Neuron (SMN) protein, loss of which causes the neuromuscular disease spinal muscular atrophy (SMA), binds to ribosomes and that this interaction is tissue-dependent. SMN-primed ribosomes are positioned within the first five codons of a set of mRNAs which are enriched in IRES-like sequences in the 5’UTR and rare codons at the beginning of their coding sequence. Loss of SMN at early-stages of SMA induces translational defects in vivo, characterized by ribosome depletion in rare codons at the third and fifth position of the coding sequence. These positional defects cause ribosome depletion from mRNAs bound by SMN-primed ribosomes and translational impairment of proteins involved in motor neuron function and stability, including acetylcholinesterase. Thus, SMN plays a crucial role in the regulation of ribosome fluxes along mRNAs which encode proteins relevant to SMA pathogenesis.

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Research works printed but not linked: 70

  1. 10.1042/bj3120163 · DOI
  2. 1995, Energetics of bacterial growth: balance of anabolic and catabolic reactions, Microbiol. Rev., 59, 48, 10.1128/MR.59.1.48-62.1995 · DOI · Paper page
  3. 10.1038/msb.2010.59 · DOI · Paper page
  4. 10.1186/1471-2164-13-220 · DOI
  5. 10.1038/nrd4505 · DOI · Paper page
  6. 10.1016/j.bbagrm.2015.05.004 · DOI
  7. 10.1016/j.cell.2011.06.013 · DOI · Paper page
  8. 10.1016/j.brainres.2018.02.018 · DOI
  9. 10.1002/dneu.22555 · DOI
  10. 2017, others, In Vivo Translatome Profiling in Spinal Muscular Atrophy Reveals a Role for SMN Protein in Ribosome Biology, Cell Rep., 21, 953, 10.1016/j.celrep.2017.10.010 · DOI
  11. 10.1016/j.ceb.2017.02.010 · DOI
  12. 10.1073/pnas.192442499 · DOI
  13. 10.1038/nrm3359 · DOI
  14. 10.1016/j.molcel.2017.05.021 · DOI
  15. 10.1016/j.celrep.2015.09.056 · DOI
  16. 10.1016/j.celrep.2018.08.093 · DOI · Paper page
  17. 10.1126/sciadv.aao0665 · DOI · Paper page
  18. 10.1016/j.molcel.2018.11.023 · DOI
  19. 10.1016/j.cell.2011.03.028 · DOI
  20. 10.1016/0092-8674(95)90460-3 · DOI
  21. 10.1038/nrneurol.2018.4 · DOI
  22. 10.1016/j.cell.2008.03.031 · DOI
  23. 10.1016/j.cell.2012.09.012 · DOI
  24. 10.1371/journal.pgen.1000773 · DOI
  25. 10.1016/j.celrep.2017.12.003 · DOI
  26. 10.1093/hmg/dds474 · DOI
  27. 10.1046/j.1460-9568.1999.00428.x · DOI
  28. 10.1523/JNEUROSCI.2396-15.2016 · DOI
  29. 10.1093/nar/gkw702 · DOI
  30. 10.1038/nrn2670 · DOI · Paper page
  31. 10.1038/sj.embor.7400941 · DOI
  32. 10.1093/hmg/ddy195 · DOI
  33. 10.1016/j.nbd.2017.08.004 · DOI
  34. 10.1016/j.celrep.2018.09.084 · DOI
  35. 10.1126/science.1168978 · DOI · Paper page
  36. 10.7554/eLife.01257 · DOI
  37. 10.1038/s41467-018-03751-6 · DOI · Paper page
  38. 10.1038/nrm3270 · DOI
  39. 10.1101/sqb.2011.76.010785 · DOI
  40. 10.1093/hmg/8.5.775 · DOI
  41. 10.1093/nar/gky770 · DOI
  42. 10.1523/JNEUROSCI.4178-07.2008 · DOI · Paper page
  43. 10.1126/science.aan2755 · DOI
  44. 10.1016/j.cell.2017.05.022 · DOI · Paper page
  45. H. L. Zhang , F. Pan , D. Hong , S. M. Shenoy , R. H. Singer , G. J. Bassell , Active transport of the survival motor neuron protein and the role of exon-7 in cytoplasmic localization. J. Neurosci. (2003). · DOI
  46. 10.1016/j.bbagrm.2016.12.008 · DOI
  47. 10.1093/hmg/10.5.497 · DOI
  48. 2010, SMN complexes of nucleus and cytoplasm: A proteomic study for SMA therapy, Transl. Neurosci., 1, 261, 10.2478/v10134-010-0027-6 · DOI
  49. 10.1038/nature09267 · DOI · Paper page
  50. 10.1371/journal.pone.0148311 · DOI
  51. 10.1038/cr.2014.74 · DOI
  52. 10.1038/s41467-017-00188-1 · DOI
  53. 10.1093/hmg/ddm367 · DOI
  54. 10.1093/hmg/ddn156 · DOI
  55. 10.1002/path.4080 · DOI
  56. 10.1111/j.1600-0404.1989.tb03864.x · DOI
  57. 10.1093/brain/116.3.633 · DOI
  58. 10.1038/71709 · DOI
  59. 10.1093/hmg/ddq023 · DOI
  60. 10.3791/59438 · DOI
  61. 10.1083/jcb.201406040 · DOI
  62. 10.1016/j.molcel.2014.03.023 · DOI
  63. 10.1093/hmg/ddq022 · DOI
  64. 10.1038/nprot.2012.086 · DOI
  65. 10.1371/journal.pcbi.1006169 · DOI
  66. 10.1016/j.molcel.2018.06.032 · DOI
  67. 10.1242/dmm.007245 · DOI
  68. 10.1016/j.celrep.2017.11.008 · DOI
  69. 10.1126/science.aad4939 · DOI · Paper page
  70. 10.1093/nar/gkp981 · DOI

Metadata

Authors
Lauria, F., Bernabò, P., Tebaldi, T., Groen, E., Perenthaler, E., Clamer, M., Maniscalco, F., Marchioretto, M., Orri, J., Dalla Serra, M., Inga, A., Quattrone, A., Gillingwater, T., & Viero, G.
Affiliations
  • National Research Council (IT)
  • University of Trento (IT)
  • Erasmus MC (NL)
  • Fundació Jesuïtes Educació (ES)
Corresponding author
Viero, G
Venue
Nature Cell Biology
Publisher
openRxiv
Published
2019-09-01
Volume
22
Issue
10
Pages
1239-1251
ISSN
1465-7392 (ISSN-L)
OpenAlex
W3087754470
Cited by
98
References
1
Citations by year
2026: 8 · 2025: 20 · 2024: 20 · 2023: 16 · 2022: 19 · 2021: 13 · 2020: 2
FWCI
4.05
Type
journal article
Language
en
Open access
Locations
  • Nature Cell Biology (publishedVersion)
  • bioRxiv (Cold Spring Harbor Laboratory) (acceptedVersion)
  • PubMed (publishedVersion)
  • PubMed Central (acceptedVersion)
  • EUR Research Repository (Erasmus University Rotterdam) (submittedVersion)
  • Utrecht University Repository (Utrecht University) (submittedVersion, other-oa)
  • Institutional Research Information System (Università degli Studi di Trento) (submittedVersion)
  • Edinburgh Research Explorer (University of Edinburgh) (submittedVersion, other-oa)
Funders
  • University of Bern
  • Wellcome Trust (106098/Z/14/Z, 106098)
  • University of Oxford
  • University of Edinburgh
  • European Cooperation in Science and Technology (CA15126)
  • Fondazione Telethon (GGP19115)
  • Università degli Studi di Trento
  • Javna Agencija za Raziskovalno Dejavnost RS (P1-0391)
  • AFM-Téléthon (22129)
  • Fondazione Cassa Di Risparmio Di Trento E Rovereto
  • Provincia Autonoma di Trento
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA and protein synthesis mechanisms
  • Health Sciences › Medicine › Genetics (clinical) › Neurogenetic and Muscular Disorders Research
  • Health Sciences › Medicine › Clinical Neurology › Amyotrophic Lateral Sclerosis Research
Keywords
survival motor neuron protein, spinal muscular atrophy, ribosome heterogeneity, ribosome-associated proteins, translational regulation, 5' untranslated region, rare codons, translational enhancer, acetylcholinesterase, motor neuron function
MeSH terms
Animals, Disease Models, Animal, Gene Expression Regulation, Motor Neurons, Muscular Atrophy, Spinal, Ribosomes, RNA, Messenger, Protein Biosynthesis, Proteome, Mice, Survival of Motor Neuron 1 Protein, Transcriptome

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