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Subcellular mRNA localization regulates ribosome biogenesis in migrating cells
Open accessPreprint — published as 10.1016/j.devcel.2020.10.006
Abstract
Translation of Ribosomal Protein-coding mRNAs (RP-mRNAs) constitutes a key step in ribosome biogenesis, but the mechanisms which modulate RP-mRNAs translation in coordination with other cellular processes are poorly defined. Here we show that the subcellular localization of RP-mRNAs acts as a key regulator of their translation during cell migration. As cells migrate into their surroundings, RP-mRNAs localize to actin-rich protrusions at the front the cells. This localization is mediated by La-related protein 6 (LARP6), an RNA binding protein that is enriched in protrusions. Protrusions act as hotspots of translation for RP-mRNAs, resulting in enhancement of ribosome biogenesis and overall protein synthesis, which is required for sustained migration. In human breast carcinomas, Epithelial to Mesenchymal Transition (EMT) upregulates LARP6 expression to enhance ribosome biogenesis and support invasive growth. Our findings reveal LARP6 mediated mRNA localization as a key regulator of ribosome biogenesis during cell migration, and demonstrate a role for this process in cancer progression downstream of EMT.
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Global quantification of mammalian gene expression control
Schwanhäusser, B., Busse, D., Li, N., Dittmar, G., Schuchhardt, J., Wolf, J., Chen, W., & Selbach, M. (2011) · Nature · doi:10.1038/nature10098 · Cited by 6,566 · cited 2×
“Mesenchymal-like cell migration is a highly resource intensive cellular process that requires 730 dynamic expression of large quantities of actin cytoskeletal, cell-adhesion, and extracellular matrix proteins, most of which are amongst the most abundant proteins in the proteome of mammalian cells (Schwanhausser et al.…”
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Research works printed but not linked: 50
- 10.1038/nrc1015 · DOI
- 10.1038/nrc.2017.104 · DOI
- 10.1016/j.cell.2012.06.031 · DOI
- 10.1038/nature10912 · DOI · Paper page
- 10.1038/nature11083 · DOI · Paper page
- 10.1261/rna.063172.117 · DOI
- 10.1016/j.cell.2007.08.003 · DOI · Paper page
- 10.1016/j.cell.2012.06.041 · DOI · Paper page
- 10.1101/gad.276931.115 · DOI
- 10.1038/s41467-017-00690-6 · DOI
- Kejiou, N.S. & Palazzo, A.F. mRNA localization as a rheostat to regulate subcellular gene expression. Wiley interdisciplinary reviews. RNA 8 (2017). · DOI
- 10.1016/j.cell.2005.08.033 · DOI
- 10.1083/jcb.201704019 · DOI
- 10.1038/nature06888 · DOI
- 10.1038/s41467-017-00884-y · DOI
- 10.1016/j.devcel.2015.10.005 · DOI
- 10.1261/rna.2386111 · DOI
- 10.1523/JNEUROSCI.1800-10.2010 · DOI · Paper page
- 10.1523/JNEUROSCI.6130-08.2009 · DOI
- 10.1093/nar/gkv1027 · DOI
- 10.1261/rna.047373.114 · DOI
- 10.1038/nn.2486 · DOI
- 10.1016/j.cell.2016.05.029 · DOI
- 2005, Mechanisms of cancer cell invasion, Current opinion in genetics & development, 15, 87, 10.1016/j.gde.2004.12.002 · DOI
- 2012, An unbiased analysis method to quantify mRNA localization reveals its correlation with cell motility, Cell reports, 1, 179, 10.1016/j.celrep.2011.12.009 · DOI
- 10.1016/j.ceb.2017.02.008 · DOI
- 10.1021/ac301572t · DOI · Paper page
- 10.1101/gad.231407.113 · DOI
- 10.1074/jbc.M114.621730 · DOI
- Al-Ashtal, H.A. , Rubottom, C.M. , Leeper, T.C. & Berman, A.J. The LARP1 La-Module recognizes both ends of TOP mRNAs. RNA Biol, 1–11 (2019). · DOI
- Hong, S. et al. LARP1 functions as a molecular switch for mTORC1-mediated translation of an essential class of mRNAs. Elife 6 (2017). · DOI
- Fonseca, B.D. et al. LARP1 is a major phosphorylation substrate of mTORC1. bioRxiv, 491274 (2018). · DOI
- 10.1186/1471-2105-13-S16-S12 · DOI
- 2019, Discovery and evaluation of inhibitor of LARP6 as specific antifibrotic compound, Sci Rep, 9, 326, 10.1038/s41598-018-36841-y · DOI
- 10.1016/j.jmb.2009.11.020 · DOI
- 10.1093/nar/gku1287 · DOI
- 10.1074/jbc.M113.518951 · DOI
- 10.1016/j.molcel.2017.06.005 · DOI
- 10.1016/S1097-2765(00)80143-4 · DOI
- Bastide, A. , Yewdell, J.W. & David, A. The RiboPuromycylation Method (RPM): an Immunofluorescence Technique to Map Translation Sites at the Sub-cellular Level. Bio Protoc 8 (2018). · DOI
- 10.1002/pmic.200800275 · DOI · Paper page
- 2019, Uncovering the assembly pathway of human ribosomes and its emerging links to disease, The EMBO journal, 38, e100278, 10.15252/embj.2018100278 · DOI
- 2007, Analysis of nucleolar protein dynamics reveals the nuclear degradation of ribosomal proteins, Current biology : CB, 17, 749, 10.1016/j.cub.2007.03.064 · DOI · Paper page
- 10.1073/pnas.1111561108 · DOI
- 2018, Identification of the RNA polymerase I-RNA interactome, Nucleic acids research, 46, 11002
- 2015, The proteomic landscape of triple-negative breast cancer, Cell reports, 11, 630, 10.1016/j.celrep.2015.03.050 · DOI
- 10.1073/pnas.1004900107 · DOI
- 10.1126/science.aan2399 · DOI
- 10.1158/0008-5472.CAN-10-1728 · DOI
- 2019, New insights into the mechanisms of epithelial-mesenchymal transition and implications for cancer, Nature reviews. Molecular cell biology, 20, 69, 10.1038/s41580-018-0080-4 · DOI · Paper page
Metadata
- Authors
- Dermit, M., Dodel, M., Lee, F. C. Y., Azman, M. S., Schwenzer, H., Jones, J. L., Blagden, S. P., Ule, J., & Mardakheh, F. K.
- Affiliations
- Queen Mary University of London (GB)
- The Francis Crick Institute (GB)
- University of Oxford (GB)
- Corresponding author
- Mardakheh, Faraz K.
- ORCID
- Venue
- Developmental Cell
- Publisher
- openRxiv
- Published
- 2019-11-04
- Volume
- 55
- Issue
- 3
- Pages
- 298-313.e10
- ISSN
- 1534-5807 (ISSN-L)
- PMC
- PMC7660134
- OpenAlex
- W3103929311
- Cited by
- 96
- References
- 1
- Citations by year
- 2026: 14 · 2025: 18 · 2024: 15 · 2023: 17 · 2022: 13 · 2021: 15 · 2020: 4
- FWCI
- 4.22
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Licence
- cc-by
- Locations
- Developmental Cell (publishedVersion, cc-by)
- bioRxiv (Cold Spring Harbor Laboratory) (acceptedVersion)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- UEA Digital Repository (University of East Anglia) (acceptedVersion, cc-by)
- UCL Discovery (University College London) (submittedVersion)
- Figshare (submittedVersion, cc-by)
- Queen Mary Research Online (Queen Mary University of London) (submittedVersion)
- Funders
- Francis Crick Institute (10002)
- Barts Charity (MGU0346)
- Cancer Research UK (22598)
- European Commission
- Medical Research Council (MR/P009417/1, MR/P009417, MGU0346)
- European Research Council (617837)
- Seventh Framework Programme
- H2020 European Research Council (617837)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA and protein synthesis mechanisms
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA Research and Splicing
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › PI3K/AKT/mTOR signaling in cancer
- Keywords
- ribosome biogenesis, ribosomal protein mRNAs, mRNA localization, cell migration, LARP6, RNA-binding proteins, translational regulation, epithelial-mesenchymal transition, breast cancer, tumor progression, protein synthesis
- MeSH terms
- SS-B Antigen, Autoantigens, Organelle Biogenesis, Cell Movement, Humans, Neoplasms, Protein Binding, Ribonucleoproteins, Ribosomal Proteins, Ribosomes, RNA, Messenger, Subcellular Fractions, Protein Biosynthesis, Cell Surface Extensions, RNA Transport, Cell Proliferation, Epithelial-Mesenchymal Transition, Transcriptome
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