HIV DNA Integration

Craigie, R., Bushman, F. D.·2012·Cold Spring Harbor Perspectives in Medicine

Cited by (326)

Items 101–200 of 326

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  2. Cyclin-dependent kinases as therapeutic targets for HIV-1 infection
    Andrew P. Rice · 2016 · Expert Opinion on Therapeutic Targets
  3. Advances in therapeutic application of CRISPR-Cas9
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  4. The Effect of Treatment-Associated Mutations on HIV Replication and Transmission Cycles
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  5. Novel Genetic Locus Implicated for HIV-1 Acquisition with Putative Regulatory Links to HIV Replication and Infectivity: A Genome-Wide Association Study
    Eric Otto Johnson, Dana B. Hancock, Nathan Gaddis, Joshua L. Levy, Grier P. Page, Scott P. Novak, Cristie Glasheen, Nancy L. Saccone, John P. Rice, Michael Moreau et al. · 2015 · PLoS ONE
  6. Horizontal gene transfer events reshape the global landscape of arm race between viruses and homo sapiens
    Dongsheng Chen, Yiquan Wu, Wei Zhang, Sanjie Jiang, Shan-Ze Chen · 2016 · Scientific Reports
  7. HIV-1 Gag: An Emerging Target for Antiretroviral Therapy
    Philip R. Tedbury, Eric O. Freed · 2015 · Current topics in microbiology and immunology
  8. HIV pharmacotherapy
    Elaine Wong, Nathan Trustman, April Yalong · 2016 · JAAPA
  9. Retroviral DNA Transposition: Themes and Variations
    Anna Marie Skala · 2014 · Microbiology Spectrum
  10. Glycoproteomic analysis identifies human glycoproteins secreted from HIV latently infected T cells and reveals their presence in HIV+ plasma
    Weiming Yang, Jian-Ying Zhou, Li Chen, Minghui Ao, Shisheng Sun, Paul Aiyetan, Antoine Simmons, Hui Zhang, J. Brooks Jackson · 2014 · Clinical Proteomics
  11. Impact of Chromatin on HIV Replication
    Luis M. Agosto, Matthew Gagné, Andrew J. Henderson · 2015 · Genes
  12. Infection with a newly designed dual fluorescent reporter HIV-1 effectively identifies latently infected CD4+ T cells
    Jinfeng Cai, Hongbo Gao, Jiacong Zhao, Shujing Hu, Xinyu Liang, Yanyan Yang, Zhuanglin Dai, Zhongsi Hong, Kai Deng · 2021 · eLife
  13. Pathogenesis and Treatment of HIV Infection: The Cellular, the Immune System and the Neuroendocrine Systems Perspective
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  14. HIV-1 Productively Infects and Integrates in Bronchial Epithelial Cells
    Dinesh Devadoss, Shashi P. Singh, Arpan Acharya, Kieu Chinh, Palsamy Periyasamy, Marko Manevski, Neerad C. Mishra, Carmen S. Tellez, Sundaram Ramakrishnan, Steven A. Belinsky et al. · 2021 · Frontiers in Cellular and Infection Microbiology
  15. Systemic epigenetic response to recombinant lentiviral vectors independent of proviral integration
    Tamás Arányi, Daniel Stockholm, Roseline Yao, Catherine Poinsignon, Thibaut Wiart, Guillaume Corre, Nizar Touleimat, Jörg Tost, Anne H. M. Galy, Andràs Páldi · 2016 · Epigenetics & Chromatin
  16. Friends and Foes: The Ambivalent Role of Autophagy in HIV-1 Infection
    Susanne Klute, Konstantin M. J. Sparrer · 2024 · Viruses
  17. Transcription of HIV-1 at sites of intact latent provirus integration
    Ana Rafaela Teixeira, Cíntia Bittar, Gabriela S. Silva Santos, Thiago Y. Oliveira, Amy S. Huang, Noemi Linden, Isabella A.T.M. Ferreira, Tetyana Murdza, Frauke Muecksch, Richard Brad Jones et al. · 2024 · The Journal of Experimental Medicine
  18. Fate-Regulating Circuits in Viruses: From Discovery to New Therapy Targets
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  19. Recombinant elastin-based nanoparticles for targeted gene therapy
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  20. Allosteric HIV Integrase Inhibitors Promote Formation of Inactive Branched Polymers via Homomeric Carboxy-Terminal Domain Interactions
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  21. Chronic HIV Transcription, Translation, and Persistent Inflammation
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  22. Exploring viral reservoir: The combining approach of cell sorting and droplet digital PCR
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  23. Targeting the DNA-PK complex: Its rationale use in cancer and HIV-1 infection
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  24. Current Computational Approaches for the Development of Anti-HIV Inhibitors: An Overview
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  26. HIV Infection Predisposes to Increased Chances of HBV Infection: Current Understanding of the Mechanisms Favoring HBV Infection at Each Clinical Stage of HIV Infection
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  27. Complete Genome Characterization of Reticuloendotheliosis Virus Detected in Chickens with Multiple Viral Coinfections
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  28. Different Pathways Conferring Integrase Strand-Transfer Inhibitors Resistance
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  29. Gene therapy of the central nervous system: General considerations on viral vectors for gene transfer into the brain
    Ché Serguera, Alexis‐Pierre Bemelmans · 2014 · Revue Neurologique
  30. HIV infection results in clonal expansions containing integrations within pathogenesis-related biological pathways
    Kevin G. Haworth, Lauren E. Schefter, Zachary K. Norgaard, Christina M. Ironside, Jennifer E. Adair, Hans‐Peter Kiem · 2018 · JCI Insight
  31. Deep Sequencing Analysis of Individual HIV-1 Proviruses Reveals Frequent Asymmetric Long Terminal Repeats
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  32. Biochemical Characterization of Novel Retroviral Integrase Proteins
    Ballandras-Colas, Allison, Naraharisetty, Hema, Li, Xiang, Serrao, Erik, Engelman, Alan · 2013 · PLoS ONE
  33. Comparative Analysis of HIV-1 and Murine Leukemia Virus Three-Dimensional Nuclear Distributions
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  34. Early Emergence and Long-Term Persistence of HIV-Infected T-Cell Clones in Children
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  35. HIV-1 integration sites in CD4+ T cells during primary, chronic, and late presentation of HIV-1 infection
    Yik Lim Kok, Valentina Vongrad, Sandra E Chaudron, Mohaned Shilaih, Christine Leemann, Kathrin Neumann, Katharina Kusejko, Francesca Di Giallonardo, Herbert Kuster, Dominique L. Braun et al. · 2021 · JCI Insight
  36. Neurological Complications Caused by Human Immunodeficiency Virus (HIV) and Associated Opportunistic Co-infections: A Review on their Diagnosis and Therapeutic Insights
    Sivaraman Balaji, Rohan Chakraborty, Sumit Suresh Aggarwal · 2023 · CNS & Neurological Disorders - Drug Targets
  37. Structural analysis of pleomorphic and asymmetric viruses using cryo-electron tomography and subtomogram averaging
    Martin Obr, Florian K. M. Schur · 2019 · Advances in virus research
  38. The HIV-1 capsid-binding host factor CPSF6 is post-transcriptionally regulated by the cellular microRNA miR-125b
    Evan Chaudhuri, Sabyasachi Dash, Muthukumar Balasubramaniam, Adrian Padron, Joseph Holland, Gregory A. Sowd, Fernando Villalta, Alan Engelman, Jui Pandhare, Chandravanu Dash · 2020 · Journal of Biological Chemistry
  39. HIV-infected cells are frequently clonally expanded after prolonged antiretroviral therapy: implications for HIV persistence
    Frank M. Maldarelli · 2015 · Journal of Virus Eradication
  40. Mechanisms and Factors That Drive Extensive Human Immunodeficiency Virus Type-1 Hypervariability: An Overview
    Mahmoud Mohammad Yaseen, Nizar Mohammad Abuharfeil, Mohammad A. Y. Alqudah, Mohammad Mahmoud Yaseen · 2017 · Viral Immunology
  41. Emergence of Compensatory Mutations Reveals the Importance of Electrostatic Interactions between HIV-1 Integrase and Genomic RNA
    Christian Shema Mugisha, Tung Dinh, Abhishek Kumar, Kasyap Tenneti, Jenna E. Eschbach, Keanu Davis, Robert James Gifford, Mamuka Kvaratskhelia, Sebla B. Kutluay · 2022 · mBio
  42. Human Three Prime Repair Exonuclease 1 Promotes HIV-1 Integration by Preferentially Degrading Unprocessed Viral DNA
    Benem-Orom Davids, Muthukumar Balasubramaniam, Nicklas Sapp, Prem Prakash, Shalonda Ingram, Min Li, Robert Craigie, Thomas Hollis, Jui Pandhare, Chandravanu Dash · 2021 · Journal of Virology
  43. Emerging role of cyclophilin A in HIV-1 infection: from producer cell to the target cell nucleus
    Adrian Padron, Prem Prakash, Jui Pandhare, Jeremy Luban, Chris Aiken, Muthukumar Balasubramaniam, Chandravanu Dash · 2023 · Journal of Virology
  44. Genetic Strategies for HIV Treatment and Prevention
    Alexander Falkenhagen, Sadhna Joshi · 2018 · Molecular Therapy — Nucleic Acids
  45. Production of unstable proteins through the formation of stable core complexes
    Nicolas Levy, Sylvia Eiler, Karine Pradeau‐Aubreton, Benoît Maillot, François Stricher, Marc Ruff · 2016 · Nature Communications
  46. Delivering the Goods for Genome Engineering and Editing
    Kristian Alsbjerg Skipper, Jacob Giehm Mikkelsen · 2015 · Human Gene Therapy
  47. Connecting HIV ‐1 integration and transcription: a step toward new treatments
    Bojana Lucic, Marina Lušić · 2016 · FEBS Letters
  48. Recent 5-Year Findings and Technological Advances in the Proteomic Study of HIV-Associated Disorders
    Lijun Zhang, Xiaofang Jia, Jun‐O Jin, Hongzhou Lu, Zhimi Tan · 2017 · Genomics Proteomics & Bioinformatics
  49. Markov Chain-Based Stochastic Modelling of HIV-1 Life Cycle in a CD4 T Cell
    IGOR A. SAZONOV, Dmitry Sergeevich Grebennikov, Andreas Meyerhans, Gennady Alekseevich Bocharov · 2021 · Mathematics
  50. Integrating transposable elements in the 3D genome
    Alexandros Bousios, Hans‐Wilhelm Nützmann, Dorothy Buck, Davide Michieletto · 2020 · Mobile DNA
  51. Sex differences in HIV-1 reservoir cell selection are linked to altered innate immune profiles
    Toong Seng Tan, Ce Gao, Alexander Hochroth, Liliana Vela, Leah Carrere, Sruthi Kalavacherla, Seohyun Hong, Mélanie Lancien, Chloé M. Naasz, Aischa Niesar et al. · 2025 · Science Translational Medicine
  52. Human microglia phenotypes in the brain associated with HIV infection
    Johannes C. M. Schlachetzki, Yi Zhou, Christopher K. Glass · 2022 · Current Opinion in Neurobiology
  53. Proteomics in the investigation of HIV‐1 interactions with host proteins
    Ming Li · 2014 · PROTEOMICS - CLINICAL APPLICATIONS
  54. Structural Comparison of Diverse HIV-1 Subtypes using Molecular Modelling and Docking Analyses of Integrase Inhibitors
    Darren Isaacs, Sello Given Mikasi, Adetayo Emmanuel Obasa, George Mondinde Ikomey, Sergey Shityakov, Ruben E.A. Cloete, Graeme Brendon Jacobs · 2020 · Viruses
  55. Strain-resolved de-novo metagenomic assembly of viral genomes and microbial 16S rRNAs
    Annika Jochheim, Florian A. Jochheim, Alexandra Kolodyazhnaya, Étienne Morice, Martin Steinegger, Johannes Söding · 2024 · Microbiome
  56. Identification of G-quadruplex DNA sequences in SARS-CoV2
    Amit K. Maiti · 2022 · Immunogenetics
  57. Designer Nucleases: Gene-Editing Therapies using CCR5 as an Emerging Target in HIV
    Maria João Almeida, Ana Miguel Matos · 2019 · Current HIV Research
  58. Anti-HIV Activity of Snake Venom Phospholipase A2s: Updates for New Enzymes and Different Virus Strains
    Andrei E. Siniavin, Svetlana D. Grinkina, Alexey V. Osipov, Vladislav G. Starkov, Victor I. Tsetlin, Yuri N. Utkin · 2022 · International Journal of Molecular Sciences
  59. HIV Infection: Shaping the Complex, Dynamic, and Interconnected Network of the Cytoskeleton
    Romina Cabrera-Rodríguez, Silvia Pérez-Yanes, Iria Lorenzo-Sánchez, Rodrigo Trujillo‐González, Judith Estévez‐Herrera, Jonay García-Luis, Agustı́n Valenzuela-Fernández · 2023 · International Journal of Molecular Sciences
  60. Residual Proviral Reservoirs: A High Risk for HIV Persistence and Driving Forces for Viral Rebound after Analytical Treatment Interruption
    Xiaolei Wang, Huanbin Xu · 2021 · Viruses
  61. HIV-1 mutants that escape the cytotoxic T-lymphocytes are defective in viral DNA integration
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  62. Tough Way In, Tough Way Out: The Complex Interplay of Host and Viral Factors in Nucleocytoplasmic Trafficking during HIV-1 Infection
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  63. Structure of a HIV-1 IN-Allosteric inhibitor complex at 2.93 Å resolution: Routes to inhibitor optimization
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  64. SARS-CoV-2 Portrayed against HIV: Contrary Viral Strategies in Similar Disguise
    R. Duerr, Keaton M. Crosse, Ana M. Valero-Jimenez, Meike Dittmann · 2021 · Microorganisms
  65. Host factors that promote retrotransposon integration are similar in distantly related eukaryotes
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  66. Fighting nature with nature: antiviral compounds that target retroviruses
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  67. X‐ray crystal structure of the N‐terminal region of M oloney murine leukemia virus integrase and its implications for viral DNA recognition
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  68. Factors Associated with the Size of HIV DNA Reservoir.
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  69. An Overview of Antiretroviral Agents for Treating HIV Infection in Paediatric Population
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  70. Influence of the amino-terminal sequence on the structure and function of HIV integrase
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  72. Impact of Annexin A2 on virus life cycles
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  74. Strain-specific effect on biphasic DNA binding by HIV-1 integrase
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  75. The Per-1 Short Isoform Inhibits de novo HIV-1 Transcription in Resting CD4+ T-cells
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  77. Cyclophilin A facilitates HIV-1 integration
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  78. A comprehensive application of FiveFold for conformation ensemble-based protein structure prediction
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  94. High-Throughput Mapping and Clonal Quantification of Retroviral Integration Sites
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  95. ZBTB gene expression in HIV patients: a possible new molecular mechanism of viral control
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  97. Help or Hinder: Protein Host Factors That Impact HIV-1 Replication
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  98. Consensus HIV-1 subtype A integrase and its raltegravir-resistant variants: Design and characterization of the enzymatic properties
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  99. State of genomics and epigenomics research in the perspective of HIV cure
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  100. Characterization of the Drug Resistance Profiles of Integrase Strand Transfer Inhibitors in Simian Immunodeficiency Virus SIVmac239
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