HIV DNA Integration

Craigie, R., Bushman, F. D.·2012·Cold Spring Harbor Perspectives in Medicine

Cited by (326)

Items 201–300 of 326

  1. HIV Integration into the PTEN Gene and Its Tumor Microenvironment Implications for Lung Cancer
    Davey Mitchell Smith, Elizabeth F. Rowland, Sara Gianella, Sandip Pravin Patel, Stephanie Solso, Cheryl Dullano, Robert Deiss, Daria Wells, Caroline C. Ignacio, Gemma Caballero et al. · 2025 · Current Oncology
  2. Integrase-derived peptides together with CD24-targeted lentiviral particles inhibit the growth of CD24 expressing cancer cells
    S. Shapira, Eynat Finkelshtein, D. Kazanov, Esmira Naftali, Irena Stepansky, A. Loyter, Daniel Elbirt, Mori Hay-Levy, E. Brazowski, Faina Bedny et al. · 2021 · Oncogene
  3. Virus-Like Attachment Sites and Plastic CpG Islands: Landmarks of Diversity in Plant Del Retrotransposons
    Guilherme M. Q. Cruz, Cushla J. Metcalfe, Nathalia de Setta, Edgar Andrés Ochoa Cruz, Andréia Prata Vieira, Rosario Medina, Marie‐Anne Van Sluys · 2014 · PLoS ONE
  4. Study on suitable analysis method for HIV-1 non-catalytic integrase inhibitor
    Ki Hoon Park, Minjee Kim, Seong Eun Bae, Hee Jung Lee, Kyung-Chang Kim, Byeong Sun Choi, Young Bong Kim · 2021 · Virology Journal
  5. How to break free: HIV-1 escapes from innovative therapeutic approaches
    Gloria Magro, Arianna Calistri, Cristina Parolin · 2022 · Frontiers in Virology
  6. Beyond reverse transcription: molecular mechanisms and emerging paradigms in retroviral replication
    Jehad, Mohammad Abdullah, Ali, Lizna M, Pillai, Vineeta N, Prabhu, Suresha G, Mustafa, Farah, Rizvi, Tahir A · 2026 · FEMS Microbiology Reviews
  7. First Complete Genome of Reticuloendotheliosis Virus in a Mallard Duck from Brazil: Phylogenetic Insights and Evolutionary Analysis
    Ruy D. Chacón, Claudete S. Astolfi‐Ferreira, Stefhany Valdeiglesias Ichillumpa, Henrique Lage Hagemann, Maristela Furlan Rocha, Larissa Fernandes Magalhães, Tânia de Freitas Raso, Antônio José Piantino Ferreira · 2025 · Pathogens
  8. HIV associated epigenetic trends and chronic diseases: insights into the hidden burden of chronic infection
    Courtney G. Wallace, Zachary Capriotti, Zachary A. Klase · 2026 · Clinical Epigenetics
  9. Different Mutation Tolerance of Lentiviral (HIV-1) and Deltaretroviral (BLV and HTLV) Protease Precursors
    János András Mótyán, Norbert Kassay, Krisztina Matúz, József Tőzsér · 2022 · Viruses
  10. Preliminary Study on the Possibility to Detect Virus Nucleic Acids in Post-Mortem Blood Samples
    Stefania Turrina, Davide Gibellini, Giacomo Giannini, Anna Lagni, Erica Diani, Virginia Lotti, Giulia Soldati, Filippo Gibelli, Dario Raniero, Domenico De Leo · 2022 · Frontiers in Bioscience-Landmark
  11. Stochastic Modelling of HIV-1 Replication in a CD4 T Cell with an IFN Response
    IGOR A. SAZONOV, Dmitry Sergeevich Grebennikov, Rostislav S. Savinkov, Arina Soboleva, Kirill Pavlishin, Andreas Meyerhans, Gennady Alekseevich Bocharov · 2023 · Viruses
  12. Infectious Diseases
    Herman Li, Niccolò Terrando, Harris A. Gelbard · 2024 · Advances in neurobiology
  13. HIV Replication Under High-Level Cabotegravir Is Associated with the Appearance of 3′-PPT Mutations, Circular DNA Transcription and Recombination
    Xierong Wei, Jonathan T. Lipscomb, Ariana Santos Tino, Mian-er Cong, Susan J. Ruone, Meghan L. Bentz, Mili Sheth, Jose Gerardo Garcia-Lerma, Jeffrey Allan Johnson · 2024 · Viruses
  14. A novel assay for screening inhibitors targeting HIV-1 integrase dimerization based on Ni-NTA magnetic agarose beads
    Dawei Zhang, Hong-Qiu He, Mengmeng Liu, Zhixia Meng, Shun-Xing Guo · 2016 · Scientific Reports
  15. L368F/V408F double mutant of IBD of LEDGF/p75 retains interaction with M178I mutant of HIV-1 integrase
    Anu George, Nidhanapati Karanam Raghavendra · 2017 · Biochemical and Biophysical Research Communications
  16. Potential role of micro ribonucleic acids in screening for anal cancer in human papilloma virus and human immunodeficiency virus related malignancies
    Samar Al Bitar, Tala Ballouz, Samer Doughan, Hala U. Gali‐Muhtasib, Nesrine Rizk · 2021 · World Journal of Gastrointestinal Pathophysiology
  17. Investigating site-selection mechanisms of retroviral integration in supercoiled DNA braids
    Giada Forte, Davide Michieletto, Davide Marenduzzo, Enzo Orlandini · 2021 · Journal of The Royal Society Interface
  18. Nonhuman Primates and Humanized Mice for Studies of HIV-1 Integrase Inhibitors: A Review
    Said A. Hassounah, Thibault Mésplède, Mark A. Wainberg · 2016 · Pathogens and Immunity
  19. Synthesis of two diastereomeric impurities of a fluorinated antiretroviral drug dolutegravir
    Sailaja Garrepalli, Ramesh Gudipati, Srinivasulu Reddy Amasa, K. Ravindhranath, Manojit Pal · 2021 · Journal of Molecular Structure
  20. The role of chromatin in retroviral preintegration complex function
    Nicklas Sapp, Prem Prakash, Rajasree Chakraborty, Muthukumar Balasubramaniam, Chandravanu Dash · 2025 · Journal of Biological Chemistry
  21. Systemic and Intestinal Viral Reservoirs in CD4+ T Cell Subsets in Primary SIV Infection
    Xiaolei Wang, Widade Ziani, Ronald S. Veazey, Huanbin Xu · 2021 · Viruses
  22. Effective prediction model and determination of binding residues influential for inhibitors targeting HIV-1 integrase-LEDGF/p75 interface by employing solvent accessible surface area energy as key determinant
    Patcharapong Thangsunan, Sakunna Wongsaipun, Sila Kittiwachana, Nuttee Suree · 2019 · Journal of Biomolecular Structure and Dynamics
  23. GenoPipe: identifying the genotype of origin within (epi)genomic datasets
    Olivia W. Lang, Divyanshi Srivastava, B. Franklin Pugh, William Lai · 2023 · Nucleic Acids Research
  24. Inhibition of HIV Replication by Host Cellular Factors
    José Miguel Azevedo‐Pereira, Pedro Canhão, Marta S. Calado, Quirina Santos‐Costa, Pedro Barroca · 2015 · InTech eBooks
  25. Retroviruses and Retroviral Infections
    George B. Kyei, William G. Powderly · 2016 · Elsevier eBooks
  26. Retroviral DNA Transposition: Themes and Variations
    Anna Marie Skalka · 2015 · ASM Press eBooks
  27. iDVIP: identification and characterization of viral integrase inhibitory peptides
    Kai‐Yao Huang, Hui-Ju Kao, Tzu‐Hsiang Weng, Chia‐Hung Chen, Shun‐Long Weng · 2022 · Briefings in Bioinformatics
  28. Killing in self-defense: proapoptotic drugs to eliminate intracellular pathogens
    Jan Schaefer, William Clow, Reet Bhandari, Mari Kimura, Lewis Williams, Marc Pellegrini · 2022 · Current Opinion in Immunology
  29. Human Immunodeficiency Virus Type-1
    Stephen A. Spector · 2014 · Elsevier eBooks
  30. Three prime repair exonuclease 1 preferentially degrades the integration-incompetent HIV-1 DNA through favorable kinetics, thermodynamic, structural, and conformational properties
    Prem Prakash, Purva Khodke, Muthukumar Balasubramaniam, Benem-Orom Davids, Thomas Hollis, Jamaine S. Davis, Jui Pandhare, Bajarang Vasant Kumbhar, Chandravanu Dash · 2024 · Journal of Biological Chemistry
  31. Defective HIV proviruses: possible involvement in the HIV infection pathogenesis
    Bobkova Mr · 2024 · Problems of Virology
  32. Single-cell analysis of HIV expression and integration sites reveals robust viral expression across diverse chromatin environments
    Yun Ma, Jackson J. Peterson, David M. Margolis, Edward P. Browne · 2026 · Microbiology Spectrum
  33. Interplay Between DNA-Binding/Catalytic Functions and Oligomerization of Retroviral Integrases Studied by a Combination of Time-Resolved Fluorescence Anisotropy, Fluorescence Correlation Spectroscopy and Resonance Energy Transfer
    Olivier Delelis, Eric Deprez · 2015 · Reviews in fluorescence
  34. Anti-HIV Aptamers: Challenges and Prospects
    William Serumula, Geronimo Fernandez, Victor M. Gonzalez, Raveen Parboosing · 2022 · Current HIV Research
  35. CRISPR/Cas9-based genome engineering in HIV gene therapy
    Xuanting Tang · 2021 · E3S Web of Conferences
  36. Sensitive Pathogen Detection and Drug Resistance Characterization Using Pathogen-Derived Enzyme Activity Amplified by LAMP or CRISPR-Cas
    Qin Wang, Enos C. Kline, Shane D. Gilligan-Steinberg, James J. Lai, Ian T. Hull, Ayokunle O. Olanrewaju, Nuttada Panpradist, Barry R. Lutz · 2024 · medRxiv
  37. HIV Biology: Detailed Insight into Virion Structural Organization and Its Pathogenesis
    Deeksha Agrawal, Kailash Chand, L. Preethi, Prudhvi Lal Bhukya, Muneesh Kumar Barman · 2024 · Springer eBooks
  38. The role of HIV-1 Gag and genomic RNA interactions in virion assembly
    Takaaki Koma, Bao Quoc Le, Khanh Quoc Tran, Naoya Doi, Tomoyuki Kondo, Kei Miyakawa, Akio Adachi, Masako Nomaguchi · 2025 · Frontiers in Microbiology
  39. HIV-1 Biology at the Protein Level
    David E. Ott · 2016 · Springer eBooks
  40. Experiment design for early molecular events in HIV infection
    Aditya Jagarapu, LaMont Cannon, Ryan Zurakowski · 2017 · Proceedings of the ... American Control Conference/Proceedings of the American Control Conference
  41. Development and validation of a cell-based assay system to assess human immunodeficiency virus type 1 integrase multimerization
    Tomofumi Nakamura, Joseph R. Campbell, Amber R. Moore, Sachiko Otsu, Haruo Aikawa, Hirokazu Tamamura, Hiroaki Mitsuya · 2016 · Journal of Virological Methods
  42. Assessing the contribution of antiretroviral therapy to neuronal damage and death as a mediator of cognitive decline in HIV-associated neurocognitive disorders
    Patrick J. Gannon · 2014 · Scholarly Commons (University of Pennsylvania)
  43. Chromatin and viral integration in immunity: The challenge of silencing non-self genes
    Manisha Kabi, Guillaume J. P. Filion · 2022 · Trends in Immunology
  44. Characterization of HIV-1 in the central nervous system during suppressive therapy
    Viktor Dahl · 2013 · Figshare
  45. Physical Principles of Retroviral Integration in the Human Genome
    Davide Michieletto, M. Lusic, Davide Marenduzzo, Enzo Orlandini · 2018 · bioRxiv (Cold Spring Harbor Laboratory)
  46. Vesiculovirus G protein-based stable cell lines for continuous lentiviral vector production
    Maha Tijani · 2018 · UCL Discovery (University College London)
  47. Integration
    Angela Ciuffi, Frederic D. Bushman · 2013 · Springer eBooks
  48. HIV-1 preintegration complex preferentially integrates the viral DNA into nucleosomes containing trimethylated histone 3-lysine 36 modification
    Nicklas Sapp, Nathaniel L. Burge, Khan L. Cox, Santosh Thapa, Prem Prakash, Muthukumar Balasubramaniam, Devin Christenson, Min Li, Jared Linderberger, Mamuka Kvaratskhelia et al. · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
  49. Combined direct/indirect detection allows identification of DNA termini in diverse sequencing datasets and supports a multiple-initiation-site model for HIV plus-strand synthesis
    William Yang Wang, Karen L. Artiles, Shinichi Machida, Monsef Benkirane, Nimit Jain, Andrew Z. Fire · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
  50. DNA Damage Response Proteins Are Involved in the Formation of Defective HIV-1 Proviruses
    Koleta Michalek, Sagnik Bhattacharjee, Ali Movasati, V. Clerc, Jurek Andres, Adriana L. Hotz, D. Rodrigues, Karin Jutta Metzner · 2026 · bioRxiv (Cold Spring Harbor Laboratory)
  51. Noncoding RNAs in Retrovirus Replication
    Duchon, Alice A., Musier-Forsyth, Karin · 2018 · Retrovirus-Cell Interactions
  52. Evolution of human immunodeficiency virus type 1 clade C envelope V1-V5 region during disease progression in non-human primate model
    For Yue Tso · 2013 · Lincoln (University of Nebraska)
  53. Studies of Fv1 binding and restriction
    H. L. W. Li · 2015 · UCL Discovery (University College London)
  54. Reservorios del virus de inmunodeficiencia humana tipo 1 (VIH-1): mecanismos de latencia y estrategias terapéuticas
    Eliuth David Arcia Anaya, Carlos Julio Montoya Guarín, María Teresa Rugeles López · 2014 · IATREIA
  55. Amino acid predictors of HIV-1 coreceptor use in different subtypes and their application to antiretroviral treatment
    Lotta Pramanik · 2014 · Figshare
  56. Clinical utility of raltegravir for the treatment of HIV infection in children and adolescents
    Brian Eley, Tammy Meyers, James J. C. Nuttall · 2013 · Pediatric Health Medicine and Therapeutics
  57. Drug Resistance Mutations in HIV Patients on Antiretroviral Therapy in Ghana
    Evelyn Yayra Bonney · 2013
  58. Integrating the HIV-1 assembly/maturation pathway
    Marc Potempa, Ronald I. Swanstrom · 2013 · Proceedings of the National Academy of Sciences
  59. On HIV-1 latency and viral reservoirs
    Tomas Mellber · 2015 · Gothenburg University Publications Electronic Archive (Gothenburg University)
  60. Phylogenetic analysis of HIV-1 in Mpumalanga
    P Msimanga · 2013 · SUNScholar (Stellenbosch University)
  61. Características do genoma humano associadas à integração do HIV - análise bioinformática
    Juliana Gonçalves · 2014 · Portuguese National Funding Agency for Science, Research and Technology (RCAAP Project by FCT)
  62. The role of trophoblast cells in HIV-1 passage across the placenta.
    Vinogrin Dorsamy · 2015
  63. Drug Resistance Mutations in Human Immunodeficiency Virus Type 2 Strains from Patients in Two Treatment Centers in Ghana
    Christopher Zaab-Yen Abana · 2015
  64. Human immunodeficiency virus -1 (HIV-1) –Transactivator of transcription protein (Tat) effects on Macrophage polarization
    Sylvia Sarwan · 2015 · Lu Zone Ul (Laurentian University)
  65. Caracterização de variantes virais de HIV-1 em indivíduos soropositivos com perfil de controle da progressão para a AIDS e da replicação viralavaliação da ocorrência de variantes de escape da resposta imune
    Diogo Gama Caetano · 2016 · Americanae (AECID Library)
  66. Bioinformatics analyses of non-coding genomic elements
    Kai Xuan Zhao · 2016 · Illinois Digital Environment for Access to Learning and Scholarship (University of Illinois at Urbana-Champaign)
  67. HIV-1 Integrase Inhibitors Resistance: Update of the Current Literature
    Alberto Enrico Maraolo · 2017 · Current treatment options in infectious diseases/Current treatment options in infectious disease
  68. Interactions of HIV-1 proteins with their cellular partners : insights from computational methods
    Võ Cẩm Quy, Paolo Carloni · 2013 · RWTH Publications (RWTH Aachen)
  69. Enhort: a platform for deep analysis of genomic positions
    Michael Menzel, Peter Koch, Stefan Glasenhardt, Andreas Gogol‐Döring · 2019 · PeerJ Computer Science
  70. Tissue Reservoirs of HIV-1: Insights from the Central Nervous System
    Lauren A. Rackoff · 2019 · Carolina Digital Repository (University of North Carolina at Chapel Hill)
  71. Antiretroviral drugs differentially modulate glucocorticoid activity via the glucocorticoid receptor in vitro
    Michael Kuipa · 2019 · Open University of Cape Town (University of Cape Town)
  72. The role of c-jun n-terminal kinase (JNK) and tumour protein (p53) in HIV associated pre-eclampsia.
    Yazira Pillay · 2017 · ResearchSpace (University of KwaZulu-Natal)
  73. Genetically flexible but conserved: a new essential motif in the C-ter domain of HIV-1 group M integrases
    Marine Kanja, Pierre Cappy, Nicolas Levy, Oyindamola Oladosu, Sylvie Schmidt, Paola Rossolillo, Flore Winter, Romain Gasser, Christiane Moog, Marc Ruff et al. · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
  74. Psychopathological symptoms and indicators of cellular immunity in HIV-infected patients with schizophrenia and schizoaffective disorder
    Дмитрий Алексеевич Полянский, Владимир Вениаминович Калинин · 2020 · Vestnik nevrologii psihiatrii i nejrohirurgii (Bulletin of Neurology Psychiatry and Neurosurgery)
  75. Resistance to human immunodeficiency virus infection: a rare but neglected state
    Catherine Tamalet, Christian Albert Devaux, Gregory Dubourg, Philippe Colson · 2020 · Annals of the New York Academy of Sciences
  76. Impact of Duffy Antigen Receptor for Chemokines (DARC)-null linked Neutropenia on Neutrophil and Natural Killer cell Function in HIV-1 Infection.
    Kewreshini K. Naidoo · 2018 · ResearchSpace (University of KwaZulu-Natal)
  77. Nanomedicines encountering HIV dementia: A guiding star for neurotherapeutics
    Siddhesh S. Jadhav, Nikhil Y. Yenorkar, Ruchika M. Bondre, Megha N. Karemore, Nikhil R. Bali · 2022 · Journal of Drug Delivery Science and Technology
  78. Peer Review #2 of "Enhort: a platform for deep analysis of genomic positions (v0.2)"
    2019 · PeerJ Computer Science
  79. Integration
    Angela Ciuffi, Frederic D. Bushman · 2018 · Springer eBooks
  80. RNA structural studies : implications in HIV-1 replication and the origins of life
    Thomas Gremminger · 2021
  81. Kinetics of Bovine leukemia virus aspartic protease reveals its dimerization and conformational change
    Martín Fló, Federico Carrión, Natalia Olivero‐Deibe, Sergio Bianchi, Madelón Portela, Florencia Rammauro, Beatriz Álvarez, Otto Pritsch · 2022 · PLoS ONE
  82. Chimeric antigen receptor engineered cells and their clinical application in infectious disease
    Qian Chen, Xiao‐Chen Bo, Jiaqi Hao, Zeng Wang, Bin Li · 2022 · Clinical and Translational Discovery
  83. Distal transcriptional enhancers and repressors of bidirectional promoters
    Fumiaki Uchiumi · 2022 · Elsevier eBooks
  84. Reservorios celulares del virus de inmunodeficiencia humana tipo 1 (VIH-1): características celulares y moleculares
    Eliuth David Arcia Anaya, Carlos Julio Montoya Guarín, María Teresa Rugeles López · 2014 · IATREIA
  85. IMPULSIVE DIFFERENTIAL EQUATION MODEL IN HIV-1 INHIBITION: ADVANCES IN DUAL INHIBITORS OF HIV-1 RT AND IN FOR THE PREVENTION OF HIV-1 REPLICATION
    Srijita Mondal, James Francis Peters, PRIYANKA GHOSH, A. K. Sarkar, Sourav Kumar Sasmal · 2024 · Journal of Biological Systems
  86. Evolution of Anti-Tat Antibodies and its role in developing prophylactic and therapeutic HIV-1 vaccine.
    Thandeka Innocentia Kubheka · 2024
  87. Cyclophilin A Facilitates HIV-1 DNA Integration
    Adrian Padron, Richa Dwivedi, Rajasree Chakraborty, Prem Prakash, Kyusik Kim, Jiong Shi, Jinwoo Ahn, Jui Pandhare, Jeremy Luban, Christopher Aiken et al. · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
  88. Molecular concepts for pandemic viruses : membrane fusion assays and targeting of reservoir cells
    Samuel A. Theuerkauf · 2024
  89. The Role of AZT (Azidothymidine) in the Treatment of HIV and AIDS
    Hasan Jasim Hami, Ayam Al Anisi, Elahe Vadayekheiry, Amal F. Al-Gorani, Nuha Jabbar Alrikaby · 2025 · European journal of ecology, biology and agriculture.
  90. Human Immunodeficiency Virus Types 1 and 2: Virology, Host Response, Treatment, and Prevention
    Jianming ‘James’ Tang, Paul Goepfert, Richard A. Kaslow · 2025 · Springer eBooks
  91. Virion Associated Importin Subunit Beta‐1 Augments Nuclear Import of HIV ‐1 Pre‐Integration Complex
    Sriram Yandrapally, Satarupa Sarkar, Venkateshwarlu Naik, Carsten Münk, Srikanth Rapole, Sharmistha Banerjee · 2025 · Traffic
  92. COVID-19 and HIV—Interaction, clinical course, outcome, and prognosis
    Iliyan Todorov, Bella Naydenova, Meliz Gyursel · 2025 · Scripta Scientifica Medica
  93. Natural Product-Derived Disruption of the HIV-1 Integrase–LEDGF/p75 Complex: Molecular Insights into the Inhibitory Potential of Guanipiperazine B
    Ibrahim Oluwatobi Kehinde, Paradise Madlala, Giuseppe Pellicane, Archimede Rotondo, Sukurat Olakusibe Kehinde, Mbuso A. Faya, Mahmoud E. S. Soliman · 2025 · Journal of Computational Biophysics and Chemistry
  94. First characterization of insertions in the HIV-1 integrase-coding region from people with HIV
    Nhat Quang Tu, Thomas Montrouge, Gladys Mbemba, Melissa Stampetta, Magali Bouvier‐Alias, Véronique Avettand-Fènoël, Audrey Mirand, Coralie Pallier, Mary‐Anne Trabaud, Camille Tumiotto et al. · 2025 · Journal of Antimicrobial Chemotherapy
  95. Stoichiometric Binding of Cyclophilin‐A to The HIV‐1 Capsid Modulates Its Mechanoelastic Properties
    Juan S. Rey, Alexander J. Bryer, Juan R. Perilla · 2026 · Small
  96. Les "phosphate binding protein" : entre import du phosphate et inhibition de la transcription virale
    Daniel Gonzalez · 2014
  97. TRBP recrute une 2’O-méthyltransférase au niveau de l’ARN du Virus de l’Immunodéficience Humaine de type 1 (VIH-1) : mécanisme d’échappement au système immunitaire inné
    Mathieu Ringeard · 2013
  98. Interactions VIH/autophagie dans les cellules dendritiques : de la réplication à la présentation des antigènes
    Pierre-Gregoire A. Coulon · 2014 · theses.fr (ABES)
  99. Cellular host factors involved in the translation of the HIV-1 genomic RNA
    Paulina S. Rubilar · 2015
  100. Structural rearrangements of the HIV-1 genomic RNA during maturation of the viral particle
    Élodie Mailler · 2017 · theses.fr (ABES)