The DOI matches its Crossref record; 2 of the 2 references it cites were found in a registry or an index.
Interferon-alpha regulates nuclear translocation and DNA-binding affinity of ISGF3, a multimeric transcriptional activator.
Open accessAbstract
The interaction of interferon-alpha (IFN-alpha) with a specific cell-surface receptor elicits physiological changes that rely on rapid transcriptional activation of a group of IFN-alpha-stimulated genes (ISGs). The IFN-stimulated response element (ISRE), a conserved regulatory element of all ISGs, is the target for transcriptional activation by the positive regulator IFN-stimulated gene factor-3 (ISGF3). We reported previously that post-translational activation of ISGF3 in the cytoplasm of IFN-alpha-treated cells requires two cytoplasmic activities (ISGF3 alpha and ISGF3 gamma) to produce an ISRE-binding complex that accumulates in the nucleus. In this study, we show that these activities are actually distinct subunits of the ISGF3 complex, which associate through noncovalent interaction. Sedimentation analysis, protein renaturation, and photoaffinity cross-linking of enriched preparations of cytoplasmic ISGF3 alpha and ISGF3 gamma and of nuclear ISGF3 demonstrated that ISGF3 gamma was a 48-kD polypeptide with intrinsic, low-affinity DNA-binding activity. Four polypeptides of 48, 84, 91, and 113 kD bound to the ISRE in vitro; the larger three polypeptides most likely compose the ISGF3 alpha component. These ISGF3 alpha polypeptides were unable to bind DNA alone but formed a DNA-binding complex in conjunction with ISGF3 gamma. The resulting heteromeric complex had the same ISRE-binding specificity as the individual ISGF3 gamma polypeptide but approximately 25-fold higher affinity. Whereas ISGF3 gamma partitioned between the cytoplasm and nucleus in unstimulated cells, ISGF3 alpha was stimulated to translocate to the nucleus only following IFN-alpha treatment, resulting in preferential nuclear accumulation of both ISGF3 alpha and ISGF3 gamma as a stable ISGF3-ISRE complex. This regulated nuclear translocation of an activated transcription factor subunit maintained the specificity and rapidity of the IFN-alpha signaling pathway.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
The source backs part of the claim, not all of it — or backs it for a different population, condition or comparison.
In the citing paper
“Despite the lack of reporter expression, TF footprints and nucleosome-free regions are present at ISREs pre-stimulation, consistent with the model of pre-bound but transcriptionally inactive IRF939 (Fig. 4C–D, Fig. S6C)”
From Single-molecule states link transcription factor binding to gene expression (2024) · cites this paper as [39]
Experimental — accuracy not yet measured
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
A 59-kilodalton protein associated with progestin, estrogen, androgen and glucocorticoid receptors
Tai, P. K. K., Maeda, Y., Nakao, K., Wakim, N. G., Duhring, J. L., & Faber, L. E. (1986) · Biochemistry · doi:10.1021/bi00366a043 · Cited by 257
Cohen, B., Peretz, D., Vaiman, D., Benech, P., & Chebath, J. (1988) · The EMBO Journal · doi:10.1002/j.1460-2075.1988.tb02958.x · Cited by 180
Research works printed but not linked: 55
- 10.1016/0092-8674(88)90382-0 · DOI
- 10.1126/science.3140380 · DOI
- 10.1126/science.3529394 · DOI · Paper page
- 1985, The common 90-kd protein component of non-transformed “8S” steroid receptors is a heat-shock protein., EMBO J., 4, 3131, 10.1002/j.1460-2075.1985.tb04055.x · DOI
- 10.1016/0092-8674(88)90483-7 · DOI
- 10.1016/0092-8674(88)90024-4 · DOI
- 10.1073/pnas.86.4.1203 · DOI
- 1989, Overlapping sites for constitutive and induced DNA-binding factors involved in interferon-stimulated transcription., EMBO J., 8, 831, 10.1002/j.1460-2075.1989.tb03444.x · DOI
- De Maeyer, E. and J. De Maeyer-Guignard. 1988. Interferons and other regulatory cytokines. John Wiley & Sons, New York.
- 10.1021/bi00375a037 · DOI
- 10.1073/pnas.83.15.5382 · DOI
- 10.1126/science.3283939 · DOI
- 10.1101/gad.3.8.1166 · DOI
- 10.1038/314637a0 · DOI
- 10.1016/0092-8674(84)90270-8 · DOI
- 1988, Evidence for a nuclear factor(s), IRF-1, mediating induction and silencing properties to human IFN-β gene regulatory elements., EMBO J., 7, 3397, 10.1002/j.1460-2075.1988.tb03213.x · DOI
- 10.1016/0014-4827(89)90106-7 · DOI
- 10.1038/344678a0 · DOI
- 1989, E2F from adenovirus-infected cells binds cooperatively to DNA containing two properly oriented and spaced recognition sites., Mol. Cell. Biol., 9, 4495
- 10.1101/gad.3.7.1062 · DOI
- 10.1101/gad.3.11.1699 · DOI
- 10.1016/0092-8674(89)90747-2 · DOI
- 10.1038/322743a0 · DOI
- 10.1073/pnas.85.22.8521 · DOI
- 1988, Cells resistant to interferon are defective in activation of a promoter-binding factor., EMBO J., 7, 3779, 10.1002/j.1460-2075.1988.tb03262.x · DOI
- 10.1038/227680a0 · DOI · Paper page
- 1986, Transcriptional induction by interferon., J. Biol. Chem., 261, 453, 10.1016/S0021-9258(17)42492-6 · DOI
- 10.1073/pnas.81.21.6733 · DOI
- 10.1016/0092-8674(89)90966-5 · DOI
- 10.1101/gad.3.9.1362 · DOI
- 1998, Interferon-induced nuclear factors that bind a shared promoter element correlate with positive and negative control., Genes Dev., 2, 383
- 10.1073/pnas.83.23.8929 · DOI
- 1990, Synergistic interaction between interferon-α and interferon-γ through induced synthesis of one subunit of the transcription factor ISGF3., EMBO J., 9, 1105, 10.1002/j.1460-2075.1990.tb08216.x · DOI
- 1989, α-interferon and γ interferon stimulate transcription of a single gene through different signal transduction pathways., Mol. Cell. Biol., 9, 5404
- 10.1073/pnas.87.5.2008 · DOI
- 10.1016/0092-8674(88)90122-5 · DOI
- 1990, Purification and cloning of interferon-stimulated-gene factor 2: ISGF2 (IRF-1) can bind to the promoters of both interferon-β and interferon-stimulated genes but is not a primary transcriptional activator of either., Mol. Cell. Biol., 10, 2448
- 1988, Interferon response element of the human gene 6–16., EMBO J., 7, 85, 10.1002/j.1460-2075.1988.tb02786.x · DOI
- 10.1093/nar/17.9.3415 · DOI
- 10.1073/pnas.84.18.6394 · DOI
- 10.1016/0092-8674(89)90774-5 · DOI
- 10.1016/0092-8674(89)90772-1 · DOI
- 1988, Interferon-induced binding of nuclear factors to promoter elements of the 2–5A synthetase gene., EMBO J., 7, 751, 10.1002/j.1460-2075.1988.tb02872.x · DOI
- 1985, Evidence that the 90-kDa phosphoprotein associated with the untransformed L-cell glucocorticoid receptor is a murine heat shock protein., J. Biol. Chem., 260, 12398, 10.1016/S0021-9258(17)38886-5 · DOI
- 1990, Synergism in ternary complex formation between the dimeric glycoprotein p67SRF, polypeptide p62TCF and the c-fos serum response element., EMBO J., 9, 1123, 10.1002/j.1460-2075.1990.tb08218.x · DOI
- 1989, In vitro activation and nuclear translocation of NF-γB catalyzed by cyclic AMP-dependent protein kinase and protein kinase C., Mol. Cell. Biol., 9, 2424
- 10.1073/pnas.85.16.5884 · DOI
- 10.1016/0092-8674(89)90773-3 · DOI
- 1987, Interferons increase transcription of a major histocompatibility class I gene via a 5′ interferon consensus sequence., Mol. Cell. Biol., 7, 2625
- 1987, Interferons alpha and beta as cellular regulatory molecules., Interferon, 9, 13
- 10.1016/0092-8674(87)90328-X · DOI
- 10.1016/0092-8674(90)90738-Z · DOI
- 1986, A transcriptional enhancer and an interferon-responsive sequence in major histocompatibility complex class I genes., Mol. Cell. Biol., 6, 3550
- 1987, New inducers revealed by the promoter sequence analysis of two interferon-activated human genes., Eur. J. Biochem., 169, 313, 10.1111/j.1432-1033.1987.tb13614.x · DOI
- 10.1016/0003-2697(81)90179-2 · DOI
Cited by
Sorted by citations
Darnell, J. E., Kerr, L. M., & Stark, G. R. (1994) · Science · doi:10.1126/science.8197455 · Cited by 6,080
IRF Family of Transcription Factors as Regulators of Host Defense
Taniguchi, T., Ogasawara, K., Takaoka, A., & Tanaka, N. (2001) · Annual Review of Immunology · doi:10.1146/annurev.immunol.19.1.623 · Cited by 1,658
The regulation of transcription by phosphorylation
Hunter, T. R., & Karin, M. (1992) · Cell · doi:10.1016/0092-8674(92)90162-6 · Cited by 1,273
Akira, S., Nishio, Y., Inoue, M., Wang, X.-J., We, S., Matsusaka, T., Yoshida, K., Sudo, T., Naruto, M., & Kishimoto, T. (1994) · Cell · doi:10.1016/0092-8674(94)90235-6 · Cited by 1,019
Interferon-dependent tyrosine phosphorylation of a latent cytoplasmic transcription factor
Schindler, C., Shuai, K., Prezioso, V. R., & Darnell, J. E. (1992) · Science · doi:10.1126/science.1496401 · Cited by 899
Metadata
- Authors
- Kessler, D. S., Veals, S. A., Fu, X. Y., & Levy, D. E.
- Affiliations
- New York University (US)
- Venue
- Genes & Development
- Publisher
- Cold Spring Harbor Laboratory
- Published
- 1990-10
- Volume
- 4
- Issue
- 10
- Pages
- 1753-1765
- ISSN
- 0890-9369 (ISSN-L)
- 1549-5477
- OpenAlex
- W2136690547
- Cited by
- 312
- References
- 0
- Citations by year
- 2026: 4 · 2025: 2 · 2024: 7 · 2023: 7 · 2022: 6 · 2021: 5 · 2020: 4 · 2019: 5 · 2018: 4 · 2017: 5 · 2016: 6 · 2015: 5 · 2014: 3 · 2013: 4 · 2012: 8
- Type
- posted content
- Language
- en
- Open access
- bronze
- doi.org
- Locations
- Genes & Development (publishedVersion)
- PubMed (publishedVersion)
- HighWire Press Open Archive (submittedVersion)
- Funders
- American Cancer Society
- Cancer Research Institute
- Amgen
- National Institutes of Health (2s07rr005399-30)
- National Cancer Institute (CA16087, P30CA016087)
- National Institute of Allergy and Infectious Diseases (R01-AI28900-01, R01AI028900)
- National Center for Research Resources (S07RR05399-28)
- Topics
- Life Sciences › Immunology and Microbiology › Immunology › interferon and immune responses
- Life Sciences › Immunology and Microbiology › Immunology › Cytokine Signaling Pathways and Interactions
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Chromatin Dynamics
- Keywords
- interferon-alpha, ISGF3, interferon-stimulated response element, interferon-stimulated genes, transcriptional activation, nuclear translocation, DNA binding affinity, transcription factor complex, heteromeric complexes, interferon signaling
- MeSH terms
- Base Sequence, Biological Transport, Biopolymers, Cell Nucleus, Centrifugation, Density Gradient, Cytoplasm, DNA-Binding Proteins, Electrophoresis, Polyacrylamide Gel, Humans, Interferon Type I, Molecular Sequence Data, Transcription Factors
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review