The DOI matches its Crossref record; 80 of the 80 references it cites were found in a registry or an index.
Models of Molecular Evolution and Phylogeny: Table 1.
Open accessAbstract
Phylogenetic reconstruction is a fast-growing field that is enriched by different statistical approaches and by findings and applications in a broad range of biological areas. Fundamental to these are the mathematical models used to describe the patterns of DNA base substitution and amino acid replacement. These may become some of the basic models for comparative genome research. We discuss these models, including the analysis of observed DNA base and amino acid mutation patterns, the concept of site heterogeneity, and the incorporation of structural biology data, all of which have become particularly important in recent years. We also describe the use of such models in phylogenetic reconstruction and statistical methods for the comparison of different models.
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Cites
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Cited by
Whelan, S., & Goldman, N. (2001) · Molecular Biology and Evolution · doi:10.1093/oxfordjournals.molbev.a003851 · Cited by 2,849
Self-citationCodon-substitution models for heterogeneous selection pressure at amino acid sites
Yang, Z., Nielsen, R., Goldman, N., & Pedersen, A.-M. K. (2000) · Genetics · doi:10.1093/genetics/155.1.431 · Cited by 2,286
Self-citationA biologist’s guide to Bayesian phylogenetic analysis
Nascimento, F. F., Reis, M. D., & Yang, Z. (2017) · Nature Ecology & Evolution · doi:10.1038/s41559-017-0280-x · Cited by 212
The role of GC-biased gene conversion in shaping the fastest evolving regions of the human genome
Kostka, D., Hubisz, M. J., Siepel, A., & Pollard, K. S. (2012) · Molecular Biology and Evolution · doi:10.1093/molbev/msr279 · Cited by 102
A new criterion and method for amino acid classification
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Metadata
- Authors
- Liò, P., & Goldman, N.
- Venue
- Genome Research
- Publisher
- Cold Spring Harbor Laboratory
- Published
- 1998-12-01
- Volume
- 8
- Issue
- 12
- Pages
- 1233-1244
- ISSN
- 1088-9051 (ISSN-L)
- 1549-5469
- OpenAlex
- W2155836971
- Cited by
- 284
- References
- 80
- Type
- posted content
- Language
- en
- Open access
- bronze
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Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
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