Cited by 26Gene Regulatory Network AnalysisMicro and Nano Roboticsstochastic dynamics and bifurcation

Information Theory of Chemotactic Agents Using Both Spatial and Temporal Gradient Sensing

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Rode, Julian, Novak, Maja, Friedrich, Benjamin M.·2024·PRX Life

Published version of a preprint

Abstract

Biological cells and small organisms navigate in concentration fields of signaling molecules using two fundamental gradient-sensing strategies: spatial comparison of concentrations measured at different positions on their surface and temporal comparison of concentrations measured at different locations visited along their motion path. It is believed that size and speed dictate which gradient-sensing strategy cells choose, yet this has never been formally proven. Using information theory, we investigate the optimal gradient-sensing mechanism for an ideal chemotactic agent that combines spatial and temporal comparisons. We account for the physical limits of chemosensation: molecule counting noise at physiological concentrations and motility noise inevitable at the microscale. Our simulation data collapse onto an empirical power law that predicts an optimal weighting of information as a function of motility and sensing noise, demonstrating how spatial comparison becomes more beneficial for agents that are large, slow, and less persistent. This refines and quantifies the previous heuristic notion. Our idealized model assuming unlimited information processing capabilities serves as a benchmark for the chemotaxis of biological cells. Published by the American Physical Society 2024

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Crossref · 10.1103/prxlife.2.023012

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  • By employing Pontryagin's minimum principle on the probability density function space, the solution satisfying the optimality condition δJ/δu = 0 is given by Eq. (S4).

    “By employing Pontryagin's minimum principle on the probability density function space [1-9], the solution that satisfies the optimality condition δ ˜ J/δ ˜ u = 0 is given by”

    From Theoretical Analysis of Resource-Induced Phase Transitions in Estimation Strategies (2026) · cites this paper as [7]

    The Analytical theory section (pp. 16–19) describes a likelihood map and decision rules for chemotactic agents, but does not state a solution derived using Pontryagin’s minimum principle or the condition δJ/δu = 0. Searches for Pontryagin, the optimality condition, and Eq. (S4) found no passage establishing the attributed result. (LLM, conf=0.75)

    Experimental — accuracy not yet measured

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Cited by

Authors
Rode, J., Novak, M., & Friedrich, B. M.
Affiliations
  • Center for Advancing Electronics Dresden (DE)
  • University of Zagreb (HR)
Corresponding author
Friedrich, Benjamin M.
Venue
PRX Life
Published
2024-06-18
Volume
2
Issue
2
ISSN
2835-8279 (ISSN-L)
OpenAlex
W4399775729
Cited by
26
References
66
Citations by year
2026: 10 · 2025: 9 · 2024: 6 · 2023: 1
FWCI
3.41
Type
journal article
Language
en
Open access
Locations
  • PRX Life (publishedVersion, cc-by)
  • bioRxiv (Cold Spring Harbor Laboratory) (acceptedVersion, cc-by-nc-nd)
Funders
Deutsche Forschungsgemeinschaft (391963627, EXC-2068-390729961, 421143374)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Gene Regulatory Network Analysis
  • Physical Sciences › Physics and Astronomy › Condensed Matter Physics › Micro and Nano Robotics
  • Physical Sciences › Physics and Astronomy › Statistical and Nonlinear Physics › stochastic dynamics and bifurcation
Keywords
chemotaxis, gradient sensing, spatial comparison, temporal comparison, information theory, chemosensation, power law

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