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Transcription Factor CBF4 Is a Regulator of Drought Adaptation in Arabidopsis
Open accessAbstract
In plants, low temperature and dehydration activate a set of genes containing C-repeat/dehydration-responsive elements in their promoter. It has been shown previously that the Arabidopsis CBF/DREB1 transcription activators are critical regulators of gene expression in the signal transduction of cold acclimation. Here, we report the isolation of an apparent homolog of the CBF/DREB1 proteins (CBF4) that plays the equivalent role during drought adaptation. In contrast to the three already identified CBF/DREB1 homologs, which are induced under cold stress, CBF4 gene expression is up-regulated by drought stress, but not by low temperature. Overexpression of CBF4 in transgenic Arabidopsis plants results in the activation of C-repeat/dehydration-responsive element containing downstream genes that are involved in cold acclimation and drought adaptation. As a result, the transgenic plants are more tolerant to freezing and drought stress. Because of the physiological similarity between freezing and drought stress, and the sequence and structural similarity of the CBF/DREB1 and the CBF4 proteins, we propose that the plant's response to cold and drought evolved from a common CBF-like transcription factor, first through gene duplication and then through promoter evolution.
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Cites
Floral dip: a simplified method forAgrobacterium‐mediated transformation ofArabidopsis thaliana
Clough, S. J., & Bent, A. F. (1998) · The Plant Journal · doi:10.1046/j.1365-313x.1998.00343.x · Cited by 21,934
PLANT COLD ACCLIMATION: Freezing Tolerance Genes and Regulatory Mechanisms
Thomashow, M. F. (1999) · Annual Review of Plant Physiology and Plant Molecular Biology · doi:10.1146/annurev.arplant.50.1.571 · Cited by 3,551
Self-citationPlant cis-acting regulatory DNA elements (PLACE) database: 1999
Higo, K., Ugawa, Y., Iwamoto, M., & Korenaga, T. (1999) · Nucleic Acids Research · doi:10.1093/nar/27.1.297 · Cited by 3,381
Liu, Q., Kasuga, M., Sakuma, Y., Abe, H., Miura, S., Yamaguchi-Shinozaki, K., & Shinozaki, K. (1998) · The Plant Cell · doi:10.1105/tpc.10.8.1391 · Cited by 3,044
THE MOLECULAR BASIS OF DEHYDRATION TOLERANCE IN PLANTS
Ingram, J., & Bartels, D. (1996) · Annual Review of Plant Physiology and Plant Molecular Biology · doi:10.1146/annurev.arplant.47.1.377 · Cited by 2,191
Kasuga, M., Liu, Q., Miura, S., Yamaguchi-Shinozaki, K., & Shinozaki, K. (1999) · Nature Biotechnology · doi:10.1038/7036 · Cited by 2,119
Sakuma, Y., Liu, Q., Dubouzet, J. G., Abe, H., Shinozaki, K., & Yamaguchi-Shinozaki, K. (2002) · Biochemical and Biophysical Research Communications · doi:10.1006/bbrc.2001.6299 · Cited by 1,993
Yamaguchi-Shinozaki, K., & Shinozaki, K. (1994) · The Plant Cell · doi:10.1105/tpc.6.2.251 · Cited by 1,993
Stockinger, E. J., Gilmour, S. J., & Thomashow, M. F. (1997) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.94.3.1035 · Cited by 1,807
Self-citationArabidopsis CBF1 Overexpression Induces COR Genes and Enhances Freezing Tolerance
Jaglo-Ottosen, K. R., Gilmour, S. J., Zarka, D. G., Schabenberger, O., & Thomashow, M. F. (1998) · Science · doi:10.1126/science.280.5360.104 · Cited by 1,702
Self-citationShinozaki, K., & Yamaguchi-Shinozaki, K. (2000) · Current Opinion in Plant Biology · doi:10.1016/s1369-5266(00)80068-0 · Cited by 1,628
fw2.2 : A Quantitative Trait Locus Key to the Evolution of Tomato Fruit Size
Frary, A., Nesbitt, T. C., Frary, A., Grandillo, S., Knaap, E. V. D., Cong, B., Liu, J., Meller, J., Elber, R., Alpert, K. B., et al. (2000) · Science · doi:10.1126/science.289.5476.85 · Cited by 1,413
Uno, Y., Furihata, T., Abe, H., Yoshida, R., Shinozaki, K., & Yamaguchi-Shinozaki, K. (2000) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.190309197 · Cited by 1,365
Gilmour, S. J., Zarka, D. G., Stockinger, E. J., Salazar, M. P., Houghton, J. M., & Thomashow, M. F. (1998) · The Plant Journal · doi:10.1046/j.1365-313x.1998.00310.x · Cited by 1,163
Self-citationSeki, M., Narusaka, M., Abe, H., Kasuga, M., Yamaguchi-Shinozaki, K., Carninci, P., Hayashizaki, Y., & Shinozaki, K. (2001) · The Plant Cell · doi:10.1105/tpc.13.1.61 · Cited by 1,096
Gilmour, S. J., Sebolt, A. M., Salazar, M. P., Everard, J. D., & Thomashow, M. F. (2000) · Plant Physiology · doi:10.1104/pp.124.4.1854 · Cited by 1,085
Self-citationRole of arabidopsis MYC and MYB homologs in drought- and abscisic acid-regulated gene expression.
Abe, H., Yamaguchi-Shinozaki, K., Urao, T., Iwasaki, T., Hosokawa, D., & Shinozaki, K. (1997) · The Plant Cell · doi:10.1105/tpc.9.10.1859 · Cited by 1,049
The limits of selection during maize domestication
Wang, R.-L., Stec, A., Hey, J., Lukens, L., & Doebley, J. (1999) · Nature · doi:10.1038/18435 · Cited by 740
Role of Cold-Responsive Genes in Plant Freezing Tolerance1
Thomashow, M. F. (1998) · Plant Physiology · doi:10.1104/pp.118.1.1 · Cited by 701
Self-citationJaglo, K. R. (2001) · PLANT PHYSIOLOGY · doi:10.1104/pp.127.3.910 · Cited by 664
Koornneef, M., Jorna, M. L., Brinkhorst-van der Swan, D. L. C., & Karssen, C. M. (1982) · Theoretical and Applied Genetics · doi:10.1007/bf00272861 · Cited by 623
In vivo analysis of plant promoters and transcription factors by agroinfiltration of tobacco leaves
Yang, Y., Li, R., & Qi, M. (2000) · The Plant Journal · doi:10.1046/j.1365-313x.2000.00760.x · Cited by 582
Transposable elements as sources of variation in animals and plants
Kidwell, M. G., & Lisch, D. (1997) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.94.15.7704 · Cited by 577
Phytochrome A null mutants of Arabidopsis display a wild-type phenotype in white light.
Whitelam, G. C., Johnson, E., Peng, J., Carol, P., Anderson, M. L., Cowl, J. S., & Harberd, N. P. (1993) · The Plant Cell · doi:10.1105/tpc.5.7.757 · Cited by 532
LTR-retrotransposons and MITEs: important players in the evolution of plant genomes
Wessler, S. (1995) · Current Opinion in Genetics & Development · doi:10.1016/0959-437x(95)80016-x · Cited by 490
Medina, J., Bargues, M., Terol, J., Pérez-Alonso, M., & Salinas, J. (1999) · Plant Physiology · doi:10.1104/pp.119.2.463 · Cited by 447
Nakashima, K., Shinwari, Z. K., Sakuma, Y., Seki, M., Miura, S., Shinozaki, K., & Yamaguchi-Shinozaki, K. (2000) · Plant Molecular Biology · doi:10.1023/a:1006321900483 · Cited by 406
Kim, J. C., Lee, S. H., Cheong, Y. H., Yoo, C., Lee, S. I., Chun, H. J., Yun, D., Hong, J. C., Lee, S. Y., Lim, C. O., et al. (2001) · The Plant Journal · doi:10.1046/j.1365-313x.2001.00947.x · Cited by 345
Shinwari, Z. K., Nakashima, K., Miura, S., Kasuga, M., Seki, M., Yamaguchi-Shinozaki, K., & Shinozaki, K. (1998) · Biochemical and Biophysical Research Communications · doi:10.1006/bbrc.1998.9267 · Cited by 333
Abiotic stress signal transduction in plants: Molecular and genetic perspectives
Xiong, L., & Zhu, J. (2001) · Physiologia Plantarum · doi:10.1034/j.1399-3054.2001.1120202.x · Cited by 271
DNA sequence insertion and evolutionary variation in gene regulation.
Britten, R. J. (1996) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.93.18.9374 · Cited by 253
Molecular Cloning and Expression of cor (Co ld-R egulated) Genes in Arabidopsis thaliana
Hajela, R. K., Horvath, D. P., Gilmour, S. J., & Thomashow, M. F. (1990) · Plant Physiology · doi:10.1104/pp.93.3.1246 · Cited by 251
Self-citationMobile elements inserted in the distant past have taken on important functions
Britten, R. J. (1997) · Gene · doi:10.1016/s0378-1119(97)00399-5 · Cited by 198
Molecular analysis of acclimation to cold
Pearce, R. S. (1999) · Plant Growth Regulation · doi:10.1023/a:1006291330661 · Cited by 168
Phytochrome A Null Mutants of Arabidopsis Display a Wild-Type Phenotype in White Light
Whitelam, G. C., Johnson, E., Peng, J., Carol, P., Anderson, M. L., Cowl, J. S., & Harberd, N. P. (1993) · The Plant Cell · doi:10.2307/3869613 · Cited by 154
Hydration-state-responsive proteins link cold and drought stress in spinach
Guy, C. L., Haskell, D. W., Neven, L. G., Klein, P., & Smelser, C. (1992) · Planta · doi:10.1007/bf00216823 · Cited by 139
A Segmental Gene Duplication Generated Differentially Expressed myb-Homologous Genes in Maize
Zhang, P., Chopra, S., & Peterson, T. (2000) · The Plant Cell · doi:10.1105/tpc.12.12.2311 · Cited by 123
Molecular Evolution of the teosinte branched Gene Among Maize and Related Grasses
LUKENS, L. N., & Doebley, J. (2001) · Molecular Biology and Evolution · doi:10.1093/oxfordjournals.molbev.a003843 · Cited by 102
Regulation of Arabidopsis thaliana L. (Heyn) cor78 in Response to Low Temperature
Horvath, D. P., McLarney, B., & Thomashow, M. F. (1993) · PLANT PHYSIOLOGY · doi:10.1104/pp.103.4.1047 · Cited by 100
Self-citationFreeze-Induced Dehydration and Membrane Destabilization in Plants
Steponkus, P. L., & Webb, M. S. (1992) · Springer eBooks · doi:10.1007/978-3-642-76682-4_20 · Cited by 92
Regulatory changes as a consequence of transposon insertion
Girard, L. R., & Freeling, M. (1999) · Developmental Genetics · doi:10.1002/(sici)1520-6408(1999)25:4<291::aid-dvg2>3.0.co;2-5 · Cited by 68
Metz, A. M., Timmer, R. T., & Browning, K. S. (1992) · Gene · doi:10.1016/0378-1119(92)90112-3 · Cited by 53
Transposon-induced promoter scrambling: a mechanism for the evolution of new alleles.
Kloeckener‐Gruissem, B., & Freeling, M. (1995) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.92.6.1836 · Cited by 51
Retrotransposons and the evolution of mammalian gene expression
Robins, D. M., & Samuelson, L. C. (1992) · Genetica · doi:10.1007/bf00133720 · Cited by 43
Drought and freezing tolerance and adaptation in plants: Some evidence of near equivalences
Siminovitch, D. J., & Cloutier, Y. (1983) · Cryobiology · doi:10.1016/0011-2240(83)90037-8 · Cited by 43
Razik, M. A., & Quatrano, R. S. (1997) · The Plant Cell · doi:10.1105/tpc.9.10.1791 · Cited by 16
Cited by
Drought and Salt Tolerance in Plants
Bartels, D., & Sunkar, R. (2005) · Critical Reviews in Plant Sciences · doi:10.1080/07352680590910410 · Cited by 2,615
Genome-Wide Analysis of the ERF Gene Family in Arabidopsis and Rice
Nakano, T., Suzuki, K., Fujimura, T., & Shinshi, H. (2006) · Plant Physiology · doi:10.1104/pp.105.073783 · Cited by 2,288
AP2/ERF family transcription factors in plant abiotic stress responses
Mizoi, J., Shinozaki, K., & Yamaguchi-Shinozaki, K. (2012) · Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms · doi:10.1016/j.bbagrm.2011.08.004 · Cited by 1,448
Transcriptional Regulatory Networks in Response to Abiotic Stresses in Arabidopsis and Grasses
Nakashima, K., Ito, Y., & Yamaguchi-Shinozaki, K. (2009) · Plant Physiology · doi:10.1104/pp.108.129791 · Cited by 1,250
Role of DREB transcription factors in abiotic and biotic stress tolerance in plants
Agarwal, P. K., Agarwal, P., Reddy, M. K., & Sopory, S. K. (2006) · Plant Cell Reports · doi:10.1007/s00299-006-0204-8 · Cited by 1,050
Metadata
- Authors
- Haake, V., Cook, D., Riechmann, J., Pineda, O., Thomashow, M. F., & Zhang, J. Z.
- Venue
- Plant Physiology
- Publisher
- Oxford University Press (OUP)
- Published
- 2002-10-01
- Volume
- 130
- Issue
- 2
- Pages
- 639-648
- ISSN
- 0032-0889 (ISSN-L)
- 1532-2548
- OpenAlex
- W2143741189
- Cited by
- 760
- References
- 47
- FWCI
- 28.62
- Type
- journal article
- Language
- en
- Open access
- bronze
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