The DOI matches its Crossref record; 22 of the 22 references it cites were found in a registry or an index.
A Genome-Wide Analysis of the Effects of Sucrose on Gene Expression in Arabidopsis Seedlings under Anoxia
Open accessAbstract
Exogenous sucrose (Suc) greatly enhances anoxia tolerance of Arabidopsis (Arabidopsis thaliana) seedlings. We used the Affymetrix ATH1 GeneChip containing more than 22,500 probe sets to explore the anaerobic transcriptome of Arabidopsis seedlings kept under anoxia for 6 h in presence or absence of exogenous Suc. Functional clustering was performed using the MapMan software. Besides the expected induction of genes encoding enzymes involved in Suc metabolism and alcoholic fermentation, a large number of genes not related to these pathways were affected by anoxia. Addition of exogenous Suc mitigated the effects of anoxia on auxin responsive genes that are repressed under oxygen deprivation. Anoxia-induced Suc synthases showed a lower induction in presence of exogenous Suc, suggesting that induction of these genes might be related to an anoxia-dependent sugar starvation. Anoxic induction of genes coding for heat shock proteins was much stronger in presence of exogenous Suc. Interestingly, a short heat treatment enhanced anoxia tolerance, suggesting that heat shock proteins may play a role in survival to low oxygen. These results provide insight into the effects of Suc on the anoxic transcriptome and provide a list of candidate genes that enhance anoxia tolerance of Suc-treated seedlings.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Thimm, O., Bläsing, O., Gibon, Y., Nagel, A., Meyer, S., Krüger, P., Selbig, J., Müller, L. A., Rhee, S. Y., & Stitt, M. (2004) · The Plant Journal · doi:10.1111/j.1365-313x.2004.02016.x · Cited by 3,352
Plant Adaptations to Anaerobic Stress
Vartapetian, B. B., & Jackson, M. B. (1997) · Annals of Botany · doi:10.1093/oxfordjournals.aob.a010303 · Cited by 795
Heat Shock Protein 101 Plays a Crucial Role in Thermotolerance in Arabidopsis
Queitsch, C., Hong, S.-W., Vierling, E., & Lindquist, S. (2000) · The Plant Cell · doi:10.1105/tpc.12.4.479 · Cited by 707
Review Article: The Silence of Genes in Transgenic Plants
STAM, M. (1997) · Annals of Botany · doi:10.1006/anbo.1996.0295 · Cited by 464
VISSER, E. J. W. (2003) · Annals of Botany · doi:10.1093/aob/mcg014 · Cited by 424
Expression Profile Analysis of the Low-Oxygen Response in Arabidopsis Root Cultures[W]
Klok, E. J., Wilson, I. W., Wilson, D., Chapman, S. C., Ewing, R. M., Somerville, S. C., Peacock, W. J., Dolferus, R., & Dennis, E. S. (2002) · The Plant Cell · doi:10.1105/tpc.004747 · Cited by 416
Heat Shock Proteins and Cardiovascular Pathophysiology
Snoeckx, L. H. E. H., Cornelussen, R. N., Van Nieuwenhoven, F. A., Reneman, R. S., & Van der Vusse, G. J. (2001) · Physiological Reviews · doi:10.1152/physrev.2001.81.4.1461 · Cited by 374
Plant responses to anaerobiosis
Perata, P., & Alpi, A. (1993) · Plant Science · doi:10.1016/0168-9452(93)90029-y · Cited by 351
Self-citationPostgerminative growth and lipid catabolism in oilseeds lacking the glyoxylate cycle
Eastmond, P. J., Germain, V., Lange, P. R., Bryce, J. H., Smith, S. M., & Graham, I. A. (2000) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.97.10.5669 · Cited by 314
Structure and expression profile of the sucrose synthase multigene family in Arabidopsis
Baud, S., Vaultier, M., & Rochat, C. (2004) · Journal of Experimental Botany · doi:10.1093/jxb/erh047 · Cited by 299
Cited by
SUGAR SENSING AND SIGNALING IN PLANTS: Conserved and Novel Mechanisms
Rolland, F., Baena-Gonzalez, E., & Sheen, J. (2006) · Annual Review of Plant Biology · doi:10.1146/annurev.arplant.57.032905.105441 · Cited by 2,328
A central integrator of transcription networks in plant stress and energy signalling
Baena-González, E., Rolland, F., Thevelein, J. M., & Sheen, J. (2007) · Nature · doi:10.1038/nature06069 · Cited by 1,520
Couée, I., Sulmon, C., Gouesbet, G., & El Amrani, A. (2006) · Journal of Experimental Botany · doi:10.1093/jxb/erj027 · Cited by 1,117
How plants cope with complete submergence
Voesenek, L. A. C. J., Colmer, T. D., Pierik, R., Millenaar, F. F., & Peeters, A. J. M. (2006) · New Phytologist · doi:10.1111/j.1469-8137.2006.01692.x · Cited by 580
Licausi, F., Van Dongen, J. T., Giuntoli, B., Novi, G., Santaniello, A., Geigenberger, P., & Perata, P. (2010) · The Plant Journal · doi:10.1111/j.1365-313x.2010.04149.x · Cited by 462
Self-citation
Metadata
- Authors
- Loreti, E., Poggi, A., Novi, G., Alpi, A., & Perata, P.
- Venue
- Plant Physiology
- Publisher
- Oxford University Press (OUP)
- Published
- 2005-03-01
- Volume
- 137
- Issue
- 3
- Pages
- 1130-1138
- ISSN
- 0032-0889 (ISSN-L)
- 1532-2548
- OpenAlex
- W1974899003
- Cited by
- 302
- References
- 22
- FWCI
- 17.21
- Type
- journal article
- Language
- en
- Open access
- hybrid
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
How to cite
Cite CoChat for the checks on this page, and the paper for its own findings.
- This page
- CoChat. (2026). Citation check: A Genome-Wide Analysis of the Effects of Sucrose on Gene Expression in Arabidopsis Seedlings under Anoxia. https://app.cochat.ai/papers/10.1104/pp.104.057299
- The paper
- Loreti, E., Poggi, A., Novi, G., Alpi, A., & Perata, P. (2005). A Genome-Wide Analysis of the Effects of Sucrose on Gene Expression in Arabidopsis Seedlings under Anoxia. Plant Physiology. https://doi.org/10.1104/pp.104.057299
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.
