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Discovery of new regulatory genes of lipopeptide biosynthesis in Pseudomonas fluorescens
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“PrtR is annotated as a transmembrane σ factor, and it has been previously described to display a role in P. fluorescens in controlling the formation of extracellular proteases and siderophores, as well as temperature‐dependent lipases and proteases (Burger et al., 2000; Llamas et al., 2014; Song et al., 2014).”
From Role of the CrcB transporter of Pseudomonas putida in the multi‐level stress response elicited by mineral fluoride (2022) · cites this paper as Song et al., 2014
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Research works printed but not linked: 33
- Andersen, 2003, Surface motility in Pseudomonas sp DSS73 is required for efficient biological containment of the root-pathogenic microfungi Rhizoctonia solani and Pythium ultimum, Microbiology, 149, 37, 10.1099/mic.0.25859-0 · DOI
- Berti, 2007, Identification of a biosynthetic gene cluster and the six associated lipopeptides involved in swarming motility of Pseudomonas syringae pv. tomato DC3000, J Bacteriol, 189, 6312, 10.1128/JB.00725-07 · DOI
- Burger, 2000, Temperature regulation of protease in Pseudomonas fluorescens LS107d2 by an ECF sigma factor and a transmembrane activator, Microbiology, 146, 3149, 10.1099/00221287-146-12-3149 · DOI · Paper page
- Cui, 2005, Identification of N-3-hydroxyoctanoyl-homoserine lactone production in Pseudomonas fluorescens 5064, pathogenic to broccoli, and controlling biosurfactant production by quorum sensing, Eur J Plant Pathol, 111, 297, 10.1007/s10658-004-4171-z · DOI
- Bruijn, 2009a, Regulation of cyclic lipopeptide biosynthesis in Pseudomonas fluorescens by the ClpP protease, J Bacteriol, 191, 1910, 10.1128/JB.01558-08 · DOI
- Bruijn, 2009b, Diversity and functional analysis of LuxR-type transcriptional regulators of cyclic lipopeptide biosynthesis in Pseudomonas fluorescens, Appl Environ Microbiol, 75, 4753, 10.1128/AEM.00575-09 · DOI
- Bruijn, 2007, Genome-based discovery, structure prediction and functional analysis of cyclic lipopeptide antibiotics in Pseudomonas species, Mol Microbiol, 63, 417, 10.1111/j.1365-2958.2006.05525.x · DOI
- Bruijn, 2008, Massetolide A biosynthesis in Pseudomonas fluorescens, J Bacteriol, 190, 2777, 10.1128/JB.01563-07 · DOI
- Souza, 2003, Biochemical, genetic, and zoosporicidal properties of cyclic lipopeptide surfactants produced by Pseudomonas fluorescens, Appl Environ Microbiol, 69, 7161, 10.1128/AEM.69.12.7161-7172.2003 · DOI
- Dubern, 2005, The heat shock genes dnaK, dnaJ, and grpE are involved in regulation of putisolvin biosynthesis in Pseudomonas putida PCL1445, J Bacteriol, 187, 5967, 10.1128/JB.187.17.5967-5976.2005 · DOI
- Dubern, 2006, The ppuI-rsaL-ppuR quorum-sensing system regulates biofilm formation of Pseudomonas putida PCL1445 by controlling biosynthesis of the cyclic lipopeptides putisolvins I and II, J Bacteriol, 188, 2898, 10.1128/JB.188.8.2898-2906.2006 · DOI
- Dubern, 2008, Genetic and functional characterization of the gene cluster directing the biosynthesis of putisolvin I and II in Pseudomonas putida strain PCL1445, Microbiology, 154, 2070, 10.1099/mic.0.2008/016444-0 · DOI
- Duitman, 2007, Novel methods for genetic transformation of natural Bacillus subtilis isolates used to study the regulation of the mycosubtilin and surfactin synthetases, Appl Environ Microbiol, 73, 3490, 10.1128/AEM.02751-06 · DOI
- Dumenyo, 1998, Genetic and physiological evidence for the production of N-acyl homoserine lactones by Pseudomonas syringae pv. syringae and other fluorescent plant pathogenic Pseudomonas species, Eur J Plant Pathol, 104, 569, 10.1023/A:1008651300599 · DOI
- Finking, 2004, Biosynthesis of nonribosomal peptides, Annu Rev Microbiol, 58, 453, 10.1146/annurev.micro.58.030603.123615 · DOI
- Gerard, 1997, Massetolides A-H, antimycobacterial cyclic depsipeptides produced by two pseudomonads isolated from marine habitats, J Nat Prod, 60, 223, 10.1021/np9606456 · DOI
- Halgren, 2013, Genetics of germination-arrest factor (GAF) production by Pseudomonas fluorescens WH6: identification of a gene cluster essential for GAF biosynthesis, Microbiology, 159, 36, 10.1099/mic.0.062166-0 · DOI
- Kimbrel, 2010, An improved, high-quality draft genome sequence of the germination-arrest factor-producing Pseudomonas fluorescens WH6, BMC Genomics, 11, 522, 10.1186/1471-2164-11-522 · DOI
- Kinscherf, 1999, Swarming by Pseudomonas syringae B728a requires gacS (lemA) and gacA but not the acyl-homoserine lactone biosynthetic gene ahlI, J Bacteriol, 181, 4133, 10.1128/JB.181.13.4133-4136.1999 · DOI
- Kitten, 1998, A newly identified regulator is required for virulence and toxin production in Pseudomonas syringae, Mol Microbiol, 28, 917, 10.1046/j.1365-2958.1998.00842.x · DOI
- Koch, 2002, Lipopeptide production in Pseudomonas sp. strain DSS73 is regulated by components of sugar beet seed exudate via the gac two-component regulatory system, Appl Environ Microbiol, 68, 4509, 10.1128/AEM.68.9.4509-4516.2002 · DOI
- Liberati, 2006, An ordered, nonredundant library of Pseudomonas aeruginosa strain PA14 transposon insertion mutants, P Natl Acad Sci USA, 103, 2833, 10.1073/pnas.0511100103 · DOI
- Liehl, 2006, Prevalence of local immune response against oral infection in a Drosophila/Pseudomonas infection model, PLoS Pathog, 2, e56, 10.1371/journal.ppat.0020056 · DOI
- Lu, 2002, Characterization of the salA, syrF, and syrG regulatory genes located at the right border of the syringomycin gene cluster of Pseudomonas syringae pv. syringae, Mol Plant Microbe Interact, 15, 43, 10.1094/MPMI.2002.15.1.43 · DOI
- Mascher, 2013, Signaling diversity and evolution of extracytoplasmic function (ECF) sigma factors, Curr Opin Microbiol, 16, 148, 10.1016/j.mib.2013.02.001 · DOI
- Raaijmakers, 2012, Diversity and natural functions of antibiotics produced by beneficial and plant pathogenic bacteria, Annu Rev Phytopathol, 50, 403, 10.1146/annurev-phyto-081211-172908 · DOI
- Raaijmakers, 2006, Cyclic lipopeptide production by plant-associated Pseudomonas spp.: diversity, activity, biosynthesis, and regulation, Mol Plant Microbe Interact, 19, 699, 10.1094/MPMI-19-0699 · DOI
- Raaijmakers, 2010, Natural functions of lipopeptides from Bacillus and Pseudomonas: more than surfactants and antibiotics, FEMS Microbiol Rev, 34, 1037, 10.1111/j.1574-6976.2010.00221.x · DOI · Paper page
- Sullivan, 1998, Molecular genetics of biosurfactant production, Curr Opin Biotechnol, 9, 263, 10.1016/S0958-1669(98)80057-8 · DOI
- Vallet-Gely, 2010, Association of hemolytic activity of Pseudomonas entomophila, a versatile soil bacterium, with cyclic lipopeptide production, Appl Environ Microbiol, 76, 910, 10.1128/AEM.02112-09 · DOI
- Mortel, 2009, Cellular responses of the late blight pathogen Phytophthora infestans to cyclic lipopeptide surfactants and their dependence on G proteins, Appl Environ Microbiol, 75, 4950, 10.1128/AEM.00241-09 · DOI
- Crabben, 2013, An update on serine deficiency disorders, J Inherit Metab Dis, 36, 613, 10.1007/s10545-013-9592-4 · DOI
- Wang, 2006, Characterization of the transcriptional activators SalA and SyrF, which are required for syringomycin and syringopeptin production by Pseudomonas syringae pv. syringae, J Bacteriol, 188, 3290, 10.1128/JB.188.9.3290-3298.2006 · DOI
Cited by
Sorted by citations
Calero, P., Gurdo, N., & Nikel, P. I. (2022) · Environmental Microbiology · doi:10.1111/1462-2920.16110 · Cited by 56
Metadata
- Authors
- Song, C., Aundy, K., van de Mortel, J., & Raaijmakers, J. M.
- Affiliations
- Laboratory of Phytopathology; Wageningen University; Wageningen The Netherlands
- Indian Agricultural Research Institute; New Delhi India
- Venue
- FEMS Microbiology Letters
- Publisher
- Oxford University Press (OUP)
- Published
- 2014-03-07
- Volume
- 356
- Issue
- 2
- Pages
- 166-175
- ISSN
- 0378-1097
- Cited by
- 24
- References
- 0
- Language
- en
- Funders
- Graduate School Experimental Plant Sciences, Netherlands
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