Genetic and phenotypic consequences of early domestication in black soldier flies (Hermetia illucens)
Abstract
Summary: The black soldier fly, Hermetia illucens, is an emerging biotechnological agent with its larvae being effective converters of organic waste into usable bio‐products including protein and lipids. To date, most operations use unimproved commercial populations produced by mass rearing, without cognisance of specific breeding strategies. The genetic and phenotypic consequences of these commercial practices remain unknown and could have a significant impact on long‐term population viability and productivity. The aim of this study was thus to assess the genetic and phenotypic changes during the early phases of colony establishment and domestication in the black soldier fly. An experimental colony was established from wild founder flies and a new microsatellite marker panel was developed to assess population genetic parameters along with the phenotypic characteristics of each generational cohort under captive breeding. The experimental colony was characterised by a small effective population size, subsequent loss of genetic diversity and rapid genetic and phenotypic differentiation between the generational cohorts. Ultimately, the population collapsed by the fifth generation, most likely owing to the adverse effect of inbreeding depression following the fixation of deleterious alleles. Species with r‐selected life history characteristics (e.g. short life‐span, high fecundity and low larval survival) are known to pose particular challenges for genetic management. The current study suggests that sufficient genetic and phenotypic variations exist in the wild population and that domestication and strain development could be achieved with careful population augmentation and selection during the early stages of colony establishment.
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Some studies document inbreeding depression and reduced progeny in captive BSF populations.
“although some studies document inbreeding depression and reduced progeny in captive populations (Rhode et al. 2020; Laudani et al. 2024)”
From Beyond the Black Box: Reproductive Strategies of the Black Soldier Fly as a Model for Bridging Evolutionary Biology and Applied Entomology (2026) · cites this paper as Rhode et al. 2020
Reduced heterozygosity is detected in captive BSF colonies.
“The detection of reduced heterozygosity in captive colonies (Rhode et al. 2020; Generalovic 2023; Silvaraju et al. 2026)”
From Beyond the Black Box: Reproductive Strategies of the Black Soldier Fly as a Model for Bridging Evolutionary Biology and Applied Entomology (2026) · cites this paper as Rhode et al. 2020
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Kaya, C., Generalovic, T. N., Ståhls, G., Hauser, M., Samayoa, A. C., Nunes-Silva, C. G., Roxburgh, H., Wohlfahrt, J., Ewusie, E. A., Kenis, M., et al. (2021) · BMC Biology · doi:10.1186/s12915-021-01029-w · Cited by 149 · see citing works
Self-citationGenetic differentiation in domesticated black soldier fly (Hermetia illucens) populations
Silvaraju, S., Loh, R. K., Kittelmann, S., & Puniamoorthy, N. (2025) · BMC Biology · doi:10.1186/s12915-025-02480-9 · Cited by 7 · see citing works
Exploring the potential of crossbreeding to enhance black soldier fly (Hermetia illucens) production
Meyermans, R., Broeckx, L., Mondelaers, J., Gorssen, W., Frooninckx, L., Janssens, S., Van Miert, S., & Buys, N. (2025) · Journal of Insects as Food and Feed · doi:10.1163/23524588-00001391 · Cited by 6 · see citing works
Lemke, N. B., & Puniamoorthy, N. (2026) · Evolutionary Applications · doi:10.1111/eva.70249 · Cited by 2 · see citing works
“For instance, although some studies document inbreeding depression and reduced progeny in captive populations (Rhode et al. 2020; Laudani et al. 2024), another shows the opposite, with increased production traits as a result of inbreeding (Cai et al. 2022).”
Influential
- Authors
- Rhode, C., Badenhorst, R., Hull, K. L., Greenwood, M. P., Bester‐van der Merwe, A. E., Andere, A. A., Picard, C. J., & Richards, C.
- Affiliations
- Stellenbosch University (ZA)
- Department of Genetics Stellenbosch University Private Bag X1 Matieland 7602 South Africa
- Indiana University – Purdue University Indianapolis (US)
- AgriProtein Holdings Ltd 1 Farnham Road Guildford Surrey GU2 4RG UK
- Corresponding author
- Rhode, C.
- Venue
- Animal Genetics
- Publisher
- Wiley
- Published
- 2020-06-10
- Volume
- 51
- Issue
- 5
- Pages
- 752-762
- ISSN
- 0268-9146 (ISSN-L)
- 1365-2052
- OpenAlex
- W3033649777
- Cited by
- 58
- References
- 0
- Citations by year
- 2026: 9 · 2025: 13 · 2024: 13 · 2023: 4 · 2022: 8 · 2021: 11
- FWCI
- 4.03
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Animal Genetics (publishedVersion)
- PubMed (publishedVersion)
- SUNScholar (Stellenbosch University) (submittedVersion)
- Funders
- National Research Foundation (CSRP170506229933)
- Topics
- Life Sciences › Agricultural and Biological Sciences › Insect Science › Insect Utilization and Effects
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic and phenotypic traits in livestock
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic diversity and population structure
- Keywords
- Hermetia illucens, domestication, captive breeding, population genetic parameters, genetic diversity, inbreeding depression, microsatellite markers, phenotypic differentiation, effective population size, r-selected species, colony founding
- MeSH terms
- Domestication, Animals, Diptera, Larva, Phenotype, Genetic Variation
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