THE RETENTION INDEX AND THE RESCALED CONSISTENCY INDEX
Integrity signals
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Separate phylogenetic analyses of the 12s and 16s genes show a higher level of character support for the 16s gene, according to the retention index.
“Separate phylogenetic analyses of these two genes show a higher level of character support for the 16s gene, according to the retention index of Farris ( 1989; also see table 2).”
From Phylogeny of the Bovidae (Artiodactyla, Mammalia), based on mitochondrial ribosomal DNA sequences. (1992) · cites this paper as Farris 1989
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TNT, a free program for phylogenetic analysis
Goloboff, P. A., Farris, J. S., & Nixon, K. C. (2008) · Cladistics · doi:10.1111/j.1096-0031.2008.00217.x · Cited by 5,352 · see citing works
Self-citationEstimating character weights during tree search
Goloboff, P. A. (1993) · Cladistics · doi:10.1111/j.1096-0031.1993.tb00209.x · Cited by 1,296 · see citing works
GRANT, T., FROST, D. R., CALDWELL, J. P., GAGLIARDO, R., HADDAD, C. F. B., KOK, P. J. R., MEANS, D. B., NOONAN, B. P., SCHARGEL, W. E., & WHEELER, W. C. (2006) · Bulletin of the American Museum of Natural History · doi:10.1206/0003-0090(2006)299[1:psodfa]2.0.co;2 · Cited by 578 · see citing works
LIVEZEY, B. C., & ZUSI, R. L. (2007) · Zoological Journal of the Linnean Society · doi:10.1111/j.1096-3642.2006.00293.x · Cited by 574 · see citing works
Deméré, T. A., McGowen, M. R., Berta, A., & Gatesy, J. (2008) · Systematic Biology · doi:10.1080/10635150701884632 · Cited by 283 · see citing works
Reconstructing the evolution of laughter in great apes and humans
Davila Ross, M., J Owren, M., & Zimmermann, E. (2009) · Current Biology · doi:10.1016/j.cub.2009.05.028 · Cited by 286 · see citing works
Pauls, S. U., Graf, W., Haase, P., Lumbsch, H. T., & Waringer, J. (2008) · Molecular Phylogenetics and Evolution · doi:10.1016/j.ympev.2007.11.003 · Cited by 92 · see citing works
Likelihood reinstates <i>Archaeopteryx</i> as a primitive bird
Lee, M. S. Y., & Worthy, T. H. (2012) · Biology Letters · doi:10.1098/rsbl.2011.0884 · Cited by 80 · see citing works
Phylogeny of the Bovidae (Artiodactyla, Mammalia), based on mitochondrial ribosomal DNA sequences.
(1992) · Molecular Biology and Evolution · doi:10.1093/oxfordjournals.molbev.a040734 · Cited by 80 · see citing works
Near intron pairs and the metazoan tree
Lehmann, J., Stadler, P. F., & Krauss, V. (2013) · Molecular Phylogenetics and Evolution · doi:10.1016/j.ympev.2012.11.012 · Cited by 11 · see citing works
- Authors
- Farris, J. S.
- Affiliations
- City College of New York (US)
- Corresponding author
- Farris, James S.
- ORCID
- Farris, James S.
- Venue
- Cladistics
- Publisher
- Wiley
- Published
- 1989-12
- Volume
- 5
- Issue
- 4
- Pages
- 417-419
- ISSN
- 0748-3007 (ISSN-L)
- 1096-0031
- OpenAlex
- W2035622691
- Cited by
- 1,645
- References
- 0
- Citations by year
- 2026: 17 · 2025: 25 · 2024: 24 · 2023: 28 · 2022: 33 · 2021: 29 · 2020: 34 · 2019: 31 · 2018: 30 · 2017: 45 · 2016: 41 · 2015: 38 · 2014: 67 · 2013: 50 · 2012: 50
- FWCI
- 42.94
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Cladistics (publishedVersion)
- PubMed (publishedVersion)
- Funders
- China Aerospace Science and Technology Corporation
- Topics
- Life Sciences › Agricultural and Biological Sciences › Ecology, Evolution, Behavior and Systematics › Plant Diversity and Evolution
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Phylogenetic Studies
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic diversity and population structure
- Keywords
- retention indices, phylogenetic inference, phylogenetic informativeness
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
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