Cited by 1,073Aquaculture disease management and microbiotaAquaculture Nutrition and GrowthGut microbiota and health

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Role of gastrointestinal microbiota in fish

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Nayak, Sukanta K·2010·Aquaculture Research

DOI 10.1111/j.1365-2109.2010.02546.x

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Abstract

The gastrointestinal (GI) tract of an animal consists of a very complex and dynamic microbial ecosystem that is very important from a nutritional, physiological and pathological point of view. A wide range of microbes derived from the surrounding aquatic environment, soil/sediment and feed are found to colonize in the GI tract of fish. Among the microbial groups, bacteria (aerobic, facultative anaerobic and obligate aneraobic forms) are the principal colonizers in the GI tract of fish, and in some fish, yeasts are also reported. The common bacterial colonizers in the GI tract of freshwater and marine fish include Vibrio, Aeromonas, Flavobacterium, Plesiomonas, Pseudomonas, Enterobacteriaceae, Micrococcus, Acinetobacter, Clostridium, Fusarium and Bacteroides, which may vary from species to species as well as environmental conditions. Besides, several unknown bacteria belonging to Mycoplasma, Arthrobacter, Brochothrix, Jeotgailbacillus, Ochrobactrum, Psychrobacter and Sejongia species in the GI tract of different fish species have now been identified successfully using culture-independent techniques. Gnotobiotic and conventional studies indicate the involvement of GI microbiota in fish nutrition, epithelial development, immunity as well as disease outbreak. This review also highlights the need for manipulating the gut microbiota with useful beneficial microbes through probiotic, prebiotic and synbiotic concepts for better fish health management.

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Diversity of the Human Intestinal Microbial Flora
Eckburg, P. B., Bik, E. M., Bernstein, C. N., Purdom, E., Dethlefsen, L., Sargent, M., Gill, S. R., Nelson, K. E., & Relman, D. A. (2005) · Science · doi:10.1126/science.1110591 · Cited by 7,913
Dietary Modulation of the Human Colonic Microbiota: Introducing the Concept of Prebiotics
Gibson, G. R., & Roberfroid, M. B. (1995) · Journal of Nutrition · doi:10.1093/jn/125.6.1401 · Cited by 7,659
MICROBIAL ECOLOGY OF THE GASTROINTESTINAL TRACT
Savage, D. C. (1977) · Annual Review of Microbiology · doi:10.1146/annurev.mi.31.100177.000543 · Cited by 2,436
Innate Immunity: The Virtues of a Nonclonal System of Recognition
Medzhitov, R., & Janeway, C. A. (1997) · Cell · doi:10.1016/s0092-8674(00)80412-2 · Cited by 2,434
Chromatin–IgG complexes activate B cells by dual engagement of IgM and Toll-like receptors
Leadbetter, E. A., Rifkin, I. R., Hohlbaum, A. M., Beaudette-Zlatanova, B. C., Shlomchik, M. J., & Marshak‐Rothstein, A. (2002) · Nature · doi:10.1038/416603a · Cited by 1,929
A Genomic View of the Human- Bacteroides thetaiotaomicron Symbiosis
Xu, J., Bjursell, M. K., Himrod, J., Deng, S., Carmichael, L. K., Chiang, H. C., Hooper, L. V., & Gordon, J. I. (2003) · Science · doi:10.1126/science.1080029 · Cited by 1,353
The use of probiotics in aquaculture
Gatesoupe, F.-J. (1999) · Aquaculture · doi:10.1016/s0044-8486(99)00187-8 · Cited by 1,263
The current status and future focus of probiotic and prebiotic applications for salmonids
Merrifield, D. L., Dimitroglou, A., Foey, A., Davies, S. J., Baker, R. T. M., Bøgwald, J., Castex, M., & Ringø, E. (2010) · Aquaculture · doi:10.1016/j.aquaculture.2010.02.007 · Cited by 997
Gnotobiotic zebrafish reveal evolutionarily conserved responses to the gut microbiota
Rawls, J. F., Samuel, B. S., & Gordon, J. I. (2004) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0400706101 · Cited by 986
Reciprocal Gut Microbiota Transplants from Zebrafish and Mice to Germ-free Recipients Reveal Host Habitat Selection
Rawls, J. F., Mahowald, M. A., Ley, R. E., & Gordon, J. I. (2006) · Cell · doi:10.1016/j.cell.2006.08.043 · Cited by 978
Gut microorganisms, mammalian metabolism and personalized health care
Nicholson, J. K., Holmes, E., & Wilson, I. D. (2005) · Nature Reviews Microbiology · doi:10.1038/nrmicro1152 · Cited by 945
IgA Response to Symbiotic Bacteria as a Mediator of Gut Homeostasis
Peterson, D. A., McNulty, N. P., Guruge, J. L., & Gordon, J. I. (2007) · Cell Host & Microbe · doi:10.1016/j.chom.2007.09.013 · Cited by 828
Non-digestible oligosaccharides: A review
Mussatto, S. I., & MANCILHA, I. M. D. (2006) · Carbohydrate Polymers · doi:10.1016/j.carbpol.2006.12.011 · Cited by 821
Influences of microbiota on intestinal immune system development.
Cebra, J. (1999) · American Journal of Clinical Nutrition · doi:10.1093/ajcn/69.5.1046s · Cited by 819
Probiotics in aquaculture: The need, principles and mechanisms of action and screening processes
Kesarcodi-Watson, A., Kaspar, H. F., Lategan, M. J., & Gibson, L. F. (2007) · Aquaculture · doi:10.1016/j.aquaculture.2007.11.019 · Cited by 810
Detection of Lactobacillus, Pediococcus, Leuconostoc , and Weissella Species in Human Feces by Using Group-Specific PCR Primers and Denaturing Gradient Gel Electrophoresis
Walter, J., Hertel, C., Tannock, G. W., Lis, C. M., Munro, K., & Hammes, W. P. (2001) · Applied and Environmental Microbiology · doi:10.1128/aem.67.6.2578-2585.2001 · Cited by 782
Prebiotics in aquaculture: a review
Ringø, E., Olsen, R. E., Gifstad, T. Ø., Dalmo, R. A., Amlund, H., HEMRE, G.-I., & Bakke, A. M. (2010) · Aquaculture Nutrition · doi:10.1111/j.1365-2095.2009.00731.x · Cited by 755
Lactic acid bacteria in fish: a review
Ringø, E., & Gatesoupe, F.-J. (1998) · Aquaculture · doi:10.1016/s0044-8486(97)00299-8 · Cited by 754
A review on the interactions between gut microbiota and innate immunity of fish: Table 1
D, G. R. G., & Balcázar, J. L. (2008) · FEMS Immunology & Medical Microbiology · doi:10.1111/j.1574-695x.2007.00343.x · Cited by 719
Ontogeny of the immune system of fish
Zapata, A. G., Diez, B. S., Cejalvo, T., Gutierrez‐Frías, C., & Cortés, A. (2005) · Fish & Shellfish Immunology · doi:10.1016/j.fsi.2004.09.005 · Cited by 690
Studies on Bacillus subtilis and Lactobacillus acidophilus, as potential probiotics, on the immune response and resistance of Tilapia nilotica (Oreochromis niloticus) to challenge infections
Aly, S. M., Ahmed, Y. A.-G., Gharib, A. A. E.-A., & Mohamed, M. F. (2008) · Fish & Shellfish Immunology · doi:10.1016/j.fsi.2008.03.013 · Cited by 685
Advances in fish science and technology
Kesteven, G. L. (1981) · Fisheries Research · doi:10.1016/0165-7836(81)90008-4 · Cited by 677
Creating and Maintaining the Gastrointestinal Ecosystem: What We Know and Need To Know from Gnotobiology
Falk, P. G., Hooper, L. V., Midtvedt, T., & Gordon, J. I. (1998) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.62.4.1157-1170.1998 · Cited by 658
Normal Indigenous Intestinal Flora
Finegold, S. M., Sutter, V. L., & Mathisen, G. E. (1983) · Elsevier eBooks · doi:10.1016/b978-0-12-341280-5.50007-0 · Cited by 618
Bacterial flora of fishes: A review
Cahill, M. M. (1990) · Microbial Ecology · doi:10.1007/bf02015051 · Cited by 612
Distinct signals from the microbiota promote different aspects of zebrafish gut differentiation
Bates, J. M., Mittge, E., Kuhlman, J. A., Baden, K. N., Cheesman, S. E., & Guillemin, K. J. (2006) · Developmental Biology · doi:10.1016/j.ydbio.2006.05.006 · Cited by 607
Fish nutrition in practice
Kaushik, S., & Luquet, P. (1993) · HAL (Le Centre pour la Communication Scientifique Directe) · Cited by 558
Novel ecological niche of Cetobacterium somerae, an anaerobic bacterium in the intestinal tracts of freshwater fish
Tsuchiya, C., Sakata, T., & Sugita, H. (2007) · Letters in Applied Microbiology · doi:10.1111/j.1472-765x.2007.02258.x · Cited by 520
The use and selection of probiotic bacteria for use in the culture of larval aquatic organisms
Gómez‐Gil, B., Roque, A., & Turnbull, J. F. (2000) · Aquaculture · doi:10.1016/s0044-8486(00)00431-2 · Cited by 498
Invertebrate-Microbial Interactions.
Usher, M. B., Anderson, J. M., RAYNER, A. D. M., & Walton, D. W. H. (1985) · Journal of Applied Ecology · doi:10.2307/2403211 · Cited by 445
Inhibition of Vibrio anguillarum by Pseudomonas fluorescens AH2, a Possible Probiotic Treatment of Fish
Gram, L., Melchiorsen, J., Spanggaard, B., Huber, I., & Nielsen, T. (1999) · Applied and Environmental Microbiology · doi:10.1128/aem.65.3.969-973.1999 · Cited by 423
Use of Carnobacterium sp. as a probiotic for Atlantic salmon (Salmo salar L.) and rainbow trout (Oncorhynchus mykiss, Walbaum)
Robertson, P. A. W., O'Dowd, C., Burrells, C., Williams, P., & Austin, B. P. (2000) · Aquaculture · doi:10.1016/s0044-8486(99)00349-x · Cited by 414
A probiotic strain of Vibrio alginolyticus effective in reducing diseases caused by Aeromonas salmonicida, Vibrio anguillarum and Vibrio ordalii
Austin, B. P., STUCKEY, L. F., ROBERTSON, P. A. W., Effendi, I., & GRIFFITH, D. R. W. (1995) · Journal of Fish Diseases · doi:10.1111/j.1365-2761.1995.tb01271.x · Cited by 400
The viability of probiotic bacteria as a factor influencing the immune response in rainbow trout Oncorhynchus mykiss
Panigrahi, A. K., Kiron, V., Puangkaew, J., Kobayashi, T., Satoh, S., & Sugita, H. (2004) · Aquaculture · doi:10.1016/j.aquaculture.2004.09.032 · Cited by 379
Role of Commensal Bacteria in Development of Gut-Associated Lymphoid Tissues and Preimmune Antibody Repertoire
Rhee, K., Sethupathi, P., Driks, A., Lanning, D. K., & Knight, K. L. (2004) · The Journal of Immunology · doi:10.4049/jimmunol.172.2.1118 · Cited by 375
Dietary mannan oligosaccharide supplementation modulates intestinal microbial ecology and improves gut morphology of rainbow trout, Oncorhynchus mykiss (Walbaum)
Dimitroglou, A., Merrifield, D. L., Moate, R. M., Davies, S. J., Spring, P., Sweetman, J. W., & Bradley, G. (2009) · Journal of Animal Science · doi:10.2527/jas.2008-1428 · Cited by 372
Phylogenetic Analysis of Intestinal Microflora Indicates a Novel Mycoplasma Phylotype in Farmed and Wild Salmon
Holben, W. E., Williams, P. M., Saarinen, M., Särkilahti, L. K., & Apajalahti, J. (2002) · Microbial Ecology · doi:10.1007/s00248-002-1011-6 · Cited by 370
Intestinal microflora of salmonids: a review
Ringø, E., Strøm, E., & Tabachek, J.-A. (1995) · Aquaculture Research · doi:10.1111/j.1365-2109.1995.tb00870.x · Cited by 370
Immune stimulation and improved infection resistance in European sea bass (Dicentrarchus labrax) fed mannan oligosaccharides
Torrecillas, S., Makol, A., Caballero, M. J., Montero, D., Robaina, L., Real, F., Sweetman, J. W., Tort, L., & Izquierdo, M. S. (2007) · Fish & Shellfish Immunology · doi:10.1016/j.fsi.2007.03.007 · Cited by 368
Microbial diversity of intestinal contents and mucus in rainbow trout (Oncorhynchus mykiss)
Kim, D.-H., Brunt, J., & Austin, B. P. (2006) · Journal of Applied Microbiology · doi:10.1111/j.1365-2672.2006.03185.x · Cited by 366
Effect of a mannan oligosaccharide on the growth performance and immune status of rainbow trout (Oncorhynchus mykiss)
Staykov, Y., Spring, P., Denev, S., & Sweetman, J. W. (2007) · Aquaculture International · doi:10.1007/s10499-007-9096-z · Cited by 358
Characterisation of the microbiota associated with intestine of Atlantic cod (Gadus morhua L.)
Ringø, E., Sperstad, S. V., Myklebust, R., Refstie, S., & Krogdahl, Å. (2006) · Aquaculture · doi:10.1016/j.aquaculture.2006.06.030 · Cited by 354
Intestinal microflora of fish larvae and fry
Ringø, E. (1999) · Aquaculture Research · doi:10.1046/j.1365-2109.1999.00302.x · Cited by 346
Dietary administration of the probiotic, Lactobacillus plantarum, enhanced the growth, innate immune responses, and disease resistance of the grouper Epinephelus coioides
Son, V. M., Chang, C.-C., Wu, M.-C., Guu, Y.-K., Chiu, C.-H., & Cheng, W. (2009) · Fish & Shellfish Immunology · doi:10.1016/j.fsi.2009.02.018 · Cited by 339
The vitamin B12-producing ability of the intestinal microflora of freshwater fish
Sugita, H., Miyajima, C., & Deguchi, Y. (1991) · Aquaculture · doi:10.1016/0044-8486(91)90028-6 · Cited by 330
Enzyme producing bacterial flora isolated from fish digestive tracts
Bairagi, A., Ghosh, K. S., Sen, S. K., & Ray, A. K. (2002) · Aquaculture International · doi:10.1023/a:1021355406412 · Cited by 325
The microflora of rainbow trout intestine: a comparison of traditional and molecular identification
Spanggaard, B., Huber, I., Nielsen, J. B., Nielsen, T., Appel, K., & Gram, L. (2000) · Aquaculture · doi:10.1016/s0044-8486(99)00250-1 · Cited by 320
Dietary probiotic Bacillus OJ and isomaltooligosaccharides influence the intestine microbial populations, immune responses and resistance to white spot syndrome virus in shrimp (Litopenaeus vannamei)
Li, J., Tan, B., & Mai, K. (2009) · Aquaculture · doi:10.1016/j.aquaculture.2009.03.005 · Cited by 316
Immune modulation and expression of cytokine genes in rainbow trout Oncorhynchus mykiss upon probiotic feeding
Panigrahi, A., Kiron, V., Satoh, S., Hırono, I., Kobayashi, T., Sugita, H., Puangkaew, J., & Aoki, T. (2006) · Developmental & Comparative Immunology · doi:10.1016/j.dci.2006.07.004 · Cited by 307
N UTRITIONAL I MPACT OF P RE- AND P ROBIOTICS AS P ROTECTIVE G ASTROINTESTINAL O RGANISMS
Teitelbaum, J. E., & Walker, W. A. (2002) · Annual Review of Nutrition · doi:10.1146/annurev.nutr.22.110901.145412 · Cited by 298
Dietary brewers yeast and the prebiotic Grobiotic™AE influence growth performance, immune responses and resistance of hybrid striped bass (Morone chrysops×M. saxatilis) to Streptococcus iniae infection
Li, P. (2003) · Aquaculture · doi:10.1016/j.aquaculture.2003.08.021 · Cited by 294
Modulation of the Human Gut Microflora Towards Improved Health Using Prebiotics - Assessment of Efficacy
Tuohy, K. M., Rouzaud, G., Brück, W. M., & Gibson, G. R. (2005) · Current Pharmaceutical Design · doi:10.2174/1381612053382331 · Cited by 292
Fish farming technology
Bromage, N. (1994) · Aquaculture · doi:10.1016/0044-8486(94)90262-3 · Cited by 288
Dietary administration of Lactobacillus delbrüeckii and Bacillus subtilis, single or combined, on gilthead seabream cellular innate immune responses
Salinas, I., Cuesta, A., Esteban, M. Á., & Meseguer, J. (2005) · Fish & Shellfish Immunology · doi:10.1016/j.fsi.2004.11.007 · Cited by 287
Review of probiotics available to modify gastrointestinal flora
Gismondo, M. R., Drago, L., & Lombardi, A. (1999) · International Journal of Antimicrobial Agents · doi:10.1016/s0924-8579(99)00050-3 · Cited by 273
Defence mechanisms in fish
Ellis, A. E., Munroe, A. L. S., & Roberts, R. J. (1976) · Journal of Fish Biology · doi:10.1111/j.1095-8649.1976.tb03908.x · Cited by 261
Phylogenetic analysis and in situ identification of the intestinal microbial community of rainbow trout (Oncorhynchus mykiss, Walbaum)
Huber, I., Spanggaard, B., Appel, K., Rossen, L., Nielsen, T., & Gram, L. (2003) · Journal of Applied Microbiology · doi:10.1046/j.1365-2672.2003.02109.x · Cited by 259
Live yeasts in the gut: Natural occurrence, dietary introduction, and their effects on fish health and development
Gatesoupe, F.-J. (2007) · Aquaculture · doi:10.1016/j.aquaculture.2007.01.005 · Cited by 256
Application of denaturant gradient gel electrophoresis for the analysis of the porcine gastrointestinal microbiota
Simpson, J. M., McCracken, V. J., White, B. A., Gaskins, H. R., & Mackie, R. I. (1999) · Journal of Microbiological Methods · doi:10.1016/s0167-7012(99)00029-9 · Cited by 254
The bacterial flora in the alimentary tract of freshwater salmonid fishes
Trevor J. TRUST, & Sparrow, R. A. H. (1974) · Canadian Journal of Microbiology · doi:10.1139/m74-188 · Cited by 250
Effect of dietary inulin and oligosaccharides as prebiotics for weaning turbot, Psetta maxima (Linnaeus, C. 1758)
Mahious, A. S., Gatesoupe, F.-J., Hervi, M., Métailler, R., & Ollevier, F. (2005) · Aquaculture International · doi:10.1007/s10499-005-9003-4 · Cited by 248
Effect of treatment with probiotics as water additives on tilapia (Oreochromis niloticus) growth performance and immune response
Zhou, X., Tian, Z., Wang, Y., & Li, W. (2009) · Fish Physiology and Biochemistry · doi:10.1007/s10695-009-9320-z · Cited by 247
Characterization of cellulase-producing bacteria from the digestive tract of tilapia, Oreochromis mossambica (Peters) and grass carp, Ctenopharyngodon idella (Valenciennes)
Saha, S., Roy, R. N., Sen, S. K., & Ray, A. K. (2006) · Aquaculture Research · doi:10.1111/j.1365-2109.2006.01442.x · Cited by 246
Brewers dried yeast as a source of mannan oligosaccharides for weanling pigs
White, L. A., Newman, M. C., Cromwell, G. L., & Lindemann, M. D. (2002) · Journal of Animal Science · doi:10.2527/2002.80102619x · Cited by 246
Physiological and biochemical aspects of fish development
Walther, B. T., & Fyhn, H. J. (1993) · Medical Entomology and Zoology · Cited by 245
Methods for generating and colonizing gnotobiotic zebrafish
Pham, L. N., Kanther, M., Semova, I., & Rawls, J. F. (2008) · Nature Protocols · doi:10.1038/nprot.2008.186 · Cited by 243
Isolation and characterization of turbot (Scophtalmus maximus)-associated bacteria with inhibitory effects against Vibrio anguillarum
Westerdahl, A., Olsson, J., Kjelleberg, S. J., & Conway, P. L. (1991) · Applied and Environmental Microbiology · doi:10.1128/aem.57.8.2223-2228.1991 · Cited by 229
16S rDNA-Based Analysis of Dominant Bacterial Populations Associated with Early Life Stages of Coho Salmon (Oncorhynchus kisutch)
Romero, J., & Navarrete, P. (2006) · Microbial Ecology · doi:10.1007/s00248-006-9037-9 · Cited by 226
Bacterial translocation and pathogenesis in the digestive tract of larvae and fry
Ringø, E., Myklebust, R., Mayhew, T. M., & Olsen, R. E. (2007) · Aquaculture · doi:10.1016/j.aquaculture.2007.04.047 · Cited by 226
Learning from Small Fry: The Zebrafish as a Genetic Model Organism for Aquaculture Fish Species
Dahm, R., & Geisler, R. (2006) · Marine Biotechnology · doi:10.1007/s10126-006-5139-0 · Cited by 226
Phylogeny of Lower Vertebrates and Their Immunological Structures
Zapata, A. G., & Amemiya, C. T. (2000) · Current topics in microbiology and immunology · doi:10.1007/978-3-642-59674-2_5 · Cited by 224
Effect of dietary supplementation of probiotic and vitamin C on the immune response of Indian major carp, Labeo rohita (Ham.)
Nayak, S. K., Swain, P., & Mukherjee, S. C. (2007) · Fish & Shellfish Immunology · doi:10.1016/j.fsi.2007.02.008 · Cited by 224
Early treatment with Lactobacillus delbrueckii strain induces an increase in intestinal T-cells and granulocytes and modulates immune-related genes of larval Dicentrarchus labrax (L.)
Picchietti, S., Fausto, A. M., Randelli, E., Carnevali, O., Taddei, A. R., Buonocore, F., Scapigliati, G., & Abelli, L. (2009) · Fish & Shellfish Immunology · doi:10.1016/j.fsi.2008.10.008 · Cited by 222
Protein L from Peptostreptococcus magnus binds to the kappa light chain variable domain.
Nilson, B., Solomon, A., Björck, L., & Åkerström, B. (1992) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)45867-x · Cited by 216
Secreted enzymes of Aeromonas
Pemberton, J., Kidd, S. P., & Schmidt, R. (2006) · FEMS Microbiology Letters · doi:10.1111/j.1574-6968.1997.tb10401.x · Cited by 216
Electron microscopy of the intestinal microflora of fish
Ringø, E., Olsen, R. E., Mayhew, T. M., & Myklebust, R. (2003) · Aquaculture · doi:10.1016/j.aquaculture.2003.05.001 · Cited by 216
Bacteria in the Gut: Friends and Foes and How to Alter the Balance
Rastall, R. A. (2004) · Journal of Nutrition · doi:10.1093/jn/134.8.2022s · Cited by 212
Microscale patchiness of bacterioplankton assemblage richness in seawater
Long, R., & Azam, F. (2001) · Aquatic Microbial Ecology · doi:10.3354/ame026103 · Cited by 210
Evaluation of the prebiotic GroBiotic®-A and brewers yeast as dietary supplements for sub-adult hybrid striped bass (Morone chrysops×M. saxatilis) challenged in situ with Mycobacterium marinum
Li, P., & Gatlin, D. M. (2005) · Aquaculture · doi:10.1016/j.aquaculture.2005.03.005 · Cited by 203
The probiotic potential against vibriosis of the indigenous microflora of rainbow trout
Spanggaard, B., Huber, I., Nielsen, J., Sick, E. B., Pipper, C. B., Martinussen, T., Slierendrecht, W. J., & Gram, L. (2001) · Environmental Microbiology · doi:10.1046/j.1462-2920.2001.00240.x · Cited by 203
Intestinal colonization potential of turbot (Scophthalmus maximus)- and dab (Limanda limanda)-associated bacteria with inhibitory effects against Vibrio anguillarum
Olsson, J., Westerdahl, A., Conway, P. L., & Kjelleberg, S. J. (1992) · Applied and Environmental Microbiology · doi:10.1128/aem.58.2.551-556.1992 · Cited by 202
Molecular characterisation of the intestinal microbiota of farmed Atlantic salmon (Salmo salar L.)
Hovda, M. B., Lunestad, B. T., Fontanillas, R., & Rosnes, J. T. (2007) · Aquaculture · doi:10.1016/j.aquaculture.2007.08.045 · Cited by 201
Seasonal variation in the intestinal bacterial flora of hybrid tilapia (Oreochromis niloticus×Oreochromis aureus) cultured in earthen ponds in Saudi Arabia
Al‐Harbi, A. H., & Uddin, M. N. (2003) · Aquaculture · doi:10.1016/s0044-8486(03)00388-0 · Cited by 194
Production of the antibacterial substance by Bacillus sp. strain NM 12, an intestinal bacterium of Japanese coastal fish
Sugita, H., Hirose, Y., Matsuo, N., & Deguchi, Y. (1998) · Aquaculture · doi:10.1016/s0044-8486(98)00267-1 · Cited by 192
Peptide Toxins in Sea Anemones: Structural and Functional Aspects
Honma, T., & Shiomi, K. (2005) · Marine Biotechnology · doi:10.1007/s10126-005-5093-2 · Cited by 190
Molecular Analysis of Microbiota Along the Digestive Tract of Juvenile Atlantic Salmon (Salmo salar L.)
Navarrete, P., Espejo, R. T., & Romero, J. (2008) · Microbial Ecology · doi:10.1007/s00248-008-9448-x · Cited by 189
The role of the intestinal microbiota in enteric infection
Sekirov, I., & Finlay, B. B. (2009) · The Journal of Physiology · doi:10.1113/jphysiol.2009.172742 · Cited by 188
Studies on the digestive enzymes of grass carp, Ctenopharyngodon idella (Val.)
Das, K. M., & Tripathi, S. D. (1991) · Aquaculture · doi:10.1016/0044-8486(91)90005-r · Cited by 185
Bacterial flora associated with a trophic chain consisting of microalgae, rotifers and turbot larvae: Influence of bacteria on larval survival
Nicolas, J. L., Robic, E., & Ansquer, D. (1989) · Aquaculture · doi:10.1016/0044-8486(89)90036-7 · Cited by 182
Colonization in the fish intestinal tract and production of inhibitory substances in intestinal mucus and faecal extracts by Carnobacterium sp. strain K1
Jöborn, A., Olsson, J., Westerdahl, A., Conway, P. L., & Kjelleberg, S. J. (1997) · Journal of Fish Diseases · doi:10.1046/j.1365-2761.1997.00316.x · Cited by 181
Antibacterial abilities of intestinal bacteria in freshwater cultured fish
Sugita, H., Shibuya, K., Shimooka, H., & Deguchi, Y. (1996) · Aquaculture · doi:10.1016/s0044-8486(96)01319-1 · Cited by 178
Identification of lactic acid bacteria: culture-dependent and culture-independent methods
Temmerman, R., Huys, G. R. B., & Swings, J. (2004) · Trends in Food Science & Technology · doi:10.1016/j.tifs.2003.12.007 · Cited by 177
The effect of diet on aerobic bacterial flora associated with intestine of Arctic charr (Salvelinus alpinus L.)
Ringø, E., & Olsen, R. E. (1999) · Journal of Applied Microbiology · doi:10.1046/j.1365-2672.1999.00631.x · Cited by 176
Diversity and seasonal changes in lactic acid bacteria in the intestinal tract of cultured freshwater fish
Hagi, T., Tanaka, D., Iwamura, Y., & Hoshino, T. (2004) · Aquaculture · doi:10.1016/j.aquaculture.2004.01.018 · Cited by 176
Structure of the intestinal flora responsible for development of the gut immune systemin a rodent model
Umesaki, Y., & Setoyama, H. (2000) · Microbes and Infection · doi:10.1016/s1286-4579(00)01288-0 · Cited by 170
Oxytetracycline Treatment Reduces Bacterial Diversity of Intestinal Microbiota of Atlantic Salmon
Navarrete, P., Mardones, P., Opazo, R., Espejo, R. T., & Romero, J. (2008) · Journal of Aquatic Animal Health · doi:10.1577/h07-043.1 · Cited by 169
Probiotic effect of lactic acid bacteria in the feed on growth and survival of fry of Atlantic cod (Gadus morhua)
Gildberg, A., Mikkelsen, H., Sandaker, E. K., & Ringø, E. (1997) · Hydrobiologia · doi:10.1023/a:1003052111938 · Cited by 169
Comparison of conventional and molecular techniques to investigate the intestinal microflora of rainbow trout (Oncorhynchus mykiss)
Pond, M. J., Stone, D. M., & Alderman, D. J. (2006) · Aquaculture · doi:10.1016/j.aquaculture.2006.06.037 · Cited by 160
Evidence for Two Bacteriocins Produced by Carnobacterium piscicola and Carnobacterium divergens Isolated from Fish and Active Against Listeria monocytogenes
Pilet, M.-F., Dousset, X., Barré, R., Novel, G., Desmazeaud, M., & Piard, J.-C. (1995) · Journal of Food Protection · doi:10.4315/0362-028x-58.3.256 · Cited by 160
In vivo imaging and genetic analysis link bacterial motility and symbiosis in the zebrafish gut
Rawls, J. F., Mahowald, M. A., Goodman, A. L., Trent, C. M., & Gordon, J. I. (2007) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0702386104 · Cited by 159
Study on the Intestinal Microflora of Salmonids
Yoshimizu, M., & Kimura, T. (1976) · Fish Pathology · doi:10.3147/jsfp.10.243 · Cited by 158
Effects of a Bacterial Inoculum in Channel Catfish Ponds
de Queiroz, J. F., & Boyd, C. E. (1998) · Journal of the World Aquaculture Society · doi:10.1111/j.1749-7345.1998.tb00300.x · Cited by 155
Effects of administration of probiotic strains on GALT of larval gilthead seabream: Immunohistochemical and ultrastructural studies
Picchietti, S., Mazzini, M., Taddei, A. R., Renna, R., Fausto, A. M., Mulero, V., Carnevali, O., Cresci, A., & Abelli, L. (2006) · Fish & Shellfish Immunology · doi:10.1016/j.fsi.2006.03.009 · Cited by 155
Influence of probiotic feeding duration on disease resistance and immune parameters in rainbow trout
Sharifuzzaman, S. M., & Austin, B. P. (2009) · Fish & Shellfish Immunology · doi:10.1016/j.fsi.2009.06.010 · Cited by 154
Effect of prebiotic xylooligosaccharides on growth performances and digestive enzyme activities of allogynogenetic crucian carp (Carassius auratus gibelio)
Xu, B., Wang, Y., Li, J., & Lin, Q. (2008) · Fish Physiology and Biochemistry · doi:10.1007/s10695-008-9248-8 · Cited by 152
Utility of Splenic Macrophage Aggregates as an Indicator of Fish Exposure to Degraded Environments
Fournie, J. W., Summers, J. K., Courtney, L. A., Engle, V. D., & Blazer, V. S. (2001) · Journal of Aquatic Animal Health · doi:10.1577/1548-8667(2001)013 · Cited by 149
The effect of a prebiotic supplemented formula on growth and stool microbiology of term infants
Costalos, C., Kapiki, A., Apostolou, M., & Papathoma, E. (2007) · Early Human Development · doi:10.1016/j.earlhumdev.2007.03.001 · Cited by 148
The effect of dietary inulin on aerobic bacteria associated with hindgut of Arctic charr (Salvelinus alpinus L.)
Ringø, E., Sperstad, S. V., Myklebust, R., Mayhew, T. M., & Olsen, R. E. (2006) · Aquaculture Research · doi:10.1111/j.1365-2109.2006.01509.x · Cited by 147
The effect of antimicrobial compounds on the gastrointestinal microflora of rainbow trout, Salmo gairdneri Richardson
Austin, B. P., & Al‐Zahrani, A. M. J. (1988) · Journal of Fish Biology · doi:10.1111/j.1095-8649.1988.tb05444.x · Cited by 146
A review of the bacterial flora of teleosts and elasmobranchs, including methods for its analysis
Horsley, R. W. (1977) · Journal of Fish Biology · doi:10.1111/j.1095-8649.1977.tb04086.x · Cited by 145
Evidence for the competitive exclusion of Aeromonas salmonicida from fish with stress‐inducible furunculosis by a fluorescent pseudomonad
SMITH, P., & Davey, S. P. (1993) · Journal of Fish Diseases · doi:10.1111/j.1365-2761.1993.tb00888.x · Cited by 140
Enzyme production by obligate intestinal anaerobic bacteria isolated from oscars (Astronotus ocellatus), angelfish (Pterophyllum scalare) and southern flounder (Paralichthys lethostigma)
Ramirez, R. F., & Dixon, B. A. (2003) · Aquaculture · doi:10.1016/s0044-8486(03)00520-9 · Cited by 138
Mode of infection and spread of Vibrio anguillarum in turbot Scophthalmus maximus larvae after oral challenge through live feed
Grisez, L., Chair, M., Sorgeloos, P., & Ollevier, F. (1996) · Diseases of Aquatic Organisms · doi:10.3354/dao026181 · Cited by 135
Is the turbot, Scophthalmus maximus (L.), intestine a portal of entry for the fish pathogen Vibrio anguillarum?
Oisson, J. C., Jöborn, A., Westerdahl, A., Blomberg, L., Kjelleberg, S. J., & Conway, P. L. (1996) · Journal of Fish Diseases · doi:10.1111/j.1365-2761.1996.tb00129.x · Cited by 134
Comparison of the gut bacterial flora of start‐feeding larval turbot reared under different conditions
Munro, P., Barbour, A., & Blrkbeck, T. H. (1994) · Journal of Applied Bacteriology · doi:10.1111/j.1365-2672.1994.tb04402.x · Cited by 132
Characterization of the intestinal microbiota of two Antarctic notothenioid fish species
Ward, N. L., Steven, B. T., Penn, K., Methé, B. A., & Detrich, H. W. (2009) · Extremophiles · doi:10.1007/s00792-009-0252-4 · Cited by 126
Potential of probiotic organisms to prevent diarrhoea and promote digestion in farm animals – A review
Sissons, J. W. (1989) · Journal of the Science of Food and Agriculture · doi:10.1002/jsfa.2740490102 · Cited by 124
Damaging effect of dietary inulin on intestinal enterocytes in Arctic charr (Salvelinus alpinus L.)
Olsen, R. E., Myklebust, R., Kryvi, H., Mayhew, T. M., & Ringø, E. (2001) · Aquaculture Research · doi:10.1046/j.1365-2109.2001.00626.x · Cited by 122
Damaging effect of the fish pathogen Aeromonas salmonicida ssp. salmonicida on intestinal enterocytes of Atlantic salmon (Salmo salar L.)
Ring�, E., Jutfelt, F., Kanapathippillai, P., Bakken, Y., Sundell, K. S., Glette, J., Mayhew, T. M., Myklebust, R., & Olsen, R. E. (2004) · Cell and Tissue Research · doi:10.1007/s00441-004-0934-2 · Cited by 121
Obligate Anaerobic Bacteria in the Gastrointestinal Microflora of the Grass Carp (Ctenopharyngodon idella), Goldfish (Carassius auratus), and Rainbow Trout (Salmo gairdneri)
Trevor J. TRUST, Bull, L. M., Currie, B. R., & Buckley, J. T. (1979) · Journal of the Fisheries Research Board of Canada · doi:10.1139/f79-169 · Cited by 120
Gut microbiota of fast and slow growing grouper Epinephelus coioides
Sun, Y., Yang, H., Ling, Z.-C., Chang, J., & Ye, J. (2009) · African Journal of Microbiology Research · doi:10.5897/ajmr.9000353 · Cited by 119
Fermentation and Gastrointestinal Microorganisms in Fishes
Clements, K. D. (1997) · Springer eBooks · doi:10.1007/978-1-4615-4111-0_6 · Cited by 118
Numerical Taxonomy of Bacterial Isolates Associated with a Freshwater Fishery
Allen, D. A., Austin, B. P., & Colwell, R. R. (1983) · Microbiology · doi:10.1099/00221287-129-7-2043 · Cited by 115
Changes in the gut-associated microflora during the development of Atlantic halibut (Hippoglossus hippoglossus L.) larvae in three British hatcheries
Verner–Jeffreys, D. W., Shields, R. J., Bricknell, I. R., & Birkbeck, T. H. (2003) · Aquaculture · doi:10.1016/s0044-8486(02)00348-4 · Cited by 114
Microbial community diversity associated with the intestinal mucosa of farmed rainbow trout (Oncoryhnchus mykissWalbaum)
Merrifield, D. L., Burnard, D., Bradley, G., Davies, S. J., & Baker, R. T. M. (2009) · Aquaculture Research · doi:10.1111/j.1365-2109.2009.02200.x · Cited by 110
The Occurrence and Distribution of Bacterial Types on Flatfish
Liston, J. (1957) · Journal of General Microbiology · doi:10.1099/00221287-16-1-205 · Cited by 107
Sequencing of variable regions of the 16S rRNA gene for identification of lactic acid bacteria isolated from the intestinal microbiota of healthy salmonids
Balcázar, J. L., Giral, I. D. B., Ruiz‐Zarzuela, I., Vendrell, D., Gironés, O., & Múzquiz, J. L. (2007) · Comparative Immunology Microbiology and Infectious Diseases · doi:10.1016/j.cimid.2006.12.001 · Cited by 106
Bacterial microflora in the gastro-intestinal tract of Dover sole (Solea soleaL.), with emphasis on the possible role of bacteria in the nutrition of the host
MacDonald, N. L., Stark, J. R., & Austin, B. P. (1986) · FEMS Microbiology Letters · doi:10.1111/j.1574-6968.1986.tb01508.x · Cited by 105
The Bacterial Flora of the Atlantic Salmon ( Salmo salar L.) in Relation to its Environment
Horsley, R. W. (1973) · Journal of Applied Bacteriology · doi:10.1111/j.1365-2672.1973.tb04119.x · Cited by 104
Antibacterial abilities of intestinal bacteria from larval and juvenile Japanese flounder against fish pathogens
Sugita, H., Okano, R., Suzuki, Y., Iwai, D., MIZUKAMI, M., AKIYAMA, N., & Matsuura, S. (2002) · Fisheries Science · doi:10.1046/j.1444-2906.2002.00525.x · Cited by 102
Analysis of bacterial populations in the gut of developing cod larvae and identification of Vibrio logei, Vibrio anguillarum and Vibrio splendidus as pathogens of cod larvae
Reid, H. I., TREASURER, J. W., Adam, B., & Birkbeck, T. H. (2008) · Aquaculture · doi:10.1016/j.aquaculture.2008.11.022 · Cited by 97
Bacterial Pollution Indicators in the Intestinal Tract of Freshwater Fish
Geldreich, E. E., & Clarke, N. A. (1966) · Applied Microbiology · doi:10.1128/am.14.3.429-437.1966 · Cited by 96
Use of 16S rRNA gene sequencing analysis to characterize culturable intestinal bacteria in Atlantic salmon (Salmo salar) fed diets with cellulose or non-starch polysaccharides from soy
Ringø, E., Sperstad, S. V., Kraugerud, O. F., & Krogdahl, Å. (2008) · Aquaculture Research · doi:10.1111/j.1365-2109.2008.01972.x · Cited by 96
Characterization and Identification of Two Vibrio Species Indigenous to the Intestine of Fish in Cold Sea Water; Description of Vibrio iliopiscarius sp. nov.
Onarheim, A. M., Wiik, R., Burghardt, J., & Stackebrandt, E. S. (1994) · Systematic and Applied Microbiology · doi:10.1016/s0723-2020(11)80053-6 · Cited by 93
Effects of dietary oligosaccharides on the growth performance and faecal characteristics of young growing pigs
Houdijk, J. G. M., Bosch, M. W., Verstegen, M. W. A., & Berenpas, H. J. (1998) · Animal Feed Science and Technology · doi:10.1016/s0377-8401(97)00138-7 · Cited by 93
Assessing the use of a dietary probiotic/prebiotic as an enhancer of spinefoot rabbitfish Siganus rivulatus survival and growth
El-Dakar, A. Y., Shalaby, S. M., & Saoud, I. P. (2007) · Aquaculture Nutrition · doi:10.1111/j.1365-2095.2007.00491.x · Cited by 92
Vibrionaceae dominates the microflora antagonistic towards Listonella anguillarum in the intestine of cultured Atlantic cod (Gadus morhua L.) larvae
Fjellheim, A. J., Playfoot, K. J., Skjermo, J., & Vadstein, Ô. (2007) · Aquaculture · doi:10.1016/j.aquaculture.2007.04.021 · Cited by 91
Vaccination in European salmonid aquaculture: A review of practices and prospects
Press, C. M., & Lillehaug, A. (1995) · British Veterinary Journal · doi:10.1016/s0007-1935(05)80064-8 · Cited by 91
Comparison between the bacterial flora associated with fingerling rainbow trout cultured in two different hatcheries in the North-West of Spain
Nieto, T. P., Toranzo, A. E., & Barja, J. L. (1984) · Aquaculture · doi:10.1016/0044-8486(84)90100-5 · Cited by 90
Comparison of histopathology caused by Vibrio anguillarum and Vibrio ordalii in three species of Pacific salmon*
Ransom, D. P., Lannan, C. N., Rohovec, J. S., & Fryer, J. L. (1984) · Journal of Fish Diseases · doi:10.1111/j.1365-2761.1984.tb00913.x · Cited by 89
The effect of chromic oxide (Cr2O3) on aerobic bacterial populations associated with the intestinal epithelial mucosa of Arctic charr, Salvelinus alpinus (L.)
Ringø, E. (1993) · Canadian Journal of Microbiology · doi:10.1139/m93-177 · Cited by 88
Bacteria associated with early life stages of halibut, Hippoglossus hippoglossus L., inhibit growth of a pathogenic Vibrio sp.
Bergh, Ø. (1995) · Journal of Fish Diseases · doi:10.1111/j.1365-2761.1995.tb01263.x · Cited by 88
Portal of entry for pathogenic Vibrio alginolyticus into large yellow croaker Pseudosciaena crocea, and characteristics of bacterial adhesion to mucus
Chen, Q., Yan, Q., Wang, K., Zhuang, Z., & Wang, X. (2008) · Diseases of Aquatic Organisms · doi:10.3354/dao01933 · Cited by 88
Vibrio sp. strain NM 10, isolated from the intestine of a Japanese coastal fish, has an inhibitory effect against Pasteurella piscicida
Sugita, H., Matsuo, N., Hirose, Y., Iwato, M., & Deguchi, Y. (1997) · Applied and Environmental Microbiology · doi:10.1128/aem.63.12.4986-4989.1997 · Cited by 88
Drinking rate, uptake of bacteria and microalgae in turbot larvae
Reitan, K. I., Natvik, C. M., & Vadstein, Ô. (1998) · Journal of Fish Biology · doi:10.1111/j.1095-8649.1998.tb00238.x · Cited by 87
Specific probiotic characterization of Weissella hellenica DS-12 isolated from flounder intestine.
Cai, Y., Benno, Y., Nakase, T., & Oh, T.-K. (1998) · The Journal of General and Applied Microbiology · doi:10.2323/jgam.44.311 · Cited by 87
Identification of intest\inal bacteria from Japanese flounder (Paralichthys olivaceus) and their ability to digest chitin
Sugita, H., & Itō, Y. (2006) · Letters in Applied Microbiology · doi:10.1111/j.1472-765x.2006.01943.x · Cited by 87
The intestinal microflora of farmed Dover sole ( Solea solea ) at different stages of fish development
Campbell, A. C., & Buswell, J. A. (1983) · Journal of Applied Bacteriology · doi:10.1111/j.1365-2672.1983.tb01318.x · Cited by 85
Gnotobiotically grown aquatic animals: opportunities to investigate host-microbe interactions
Marques, A., Ollevier, F., Verstraete, W., Sorgeloos, P., & Bossier, P. (2006) · Journal of Applied Microbiology · doi:10.1111/j.1365-2672.2006.02961.x · Cited by 85
Determination of bacteria associated with reared turbot ( Scophthalmus maximus ) larvae
Blanch, A. R., Alsina, M., Simón, M., & Jofre, J. (1997) · Journal of Applied Microbiology · doi:10.1046/j.1365-2672.1997.00190.x · Cited by 84
Characterisation of bacterial communities associated with early stages of intensively reared cod (Gadus morhua) using Denaturing Gradient Gel Electrophoresis (DGGE)
Brunvold, L., Sandaa, R., Mikkelsen, H., Welde, E., Bleie, H., & Bergh, Ø. (2007) · Aquaculture · doi:10.1016/j.aquaculture.2007.08.053 · Cited by 82
Effect of different holding regimens on the intestinal microflora of herring (Clupea harengus) larvae
Hansen, G. H., Strøm, E., & Olafsen, J. A. (1992) · Applied and Environmental Microbiology · doi:10.1128/aem.58.2.461-470.1992 · Cited by 80
Intestinal microbiota variation in Senegalese sole (Solea senegalensis) under different feeding regimes
Martín-Antonio, B., Manchado, M., Infante, C., Zerolo, R., Labella, A. M., Alonso, C. M., & Borrego, J. J. (2007) · Aquaculture Research · doi:10.1111/j.1365-2109.2007.01790.x · Cited by 79
Development of a bacterial challenge test for gnotobiotic sea bass ( Dicentrarchus labrax ) larvae
Dierckens, K. R., Rekecki, A., Laureau, S., Sorgeloos, P., Boon, N., Broeck, W. V. D., & Bossier, P. (2009) · Environmental Microbiology · doi:10.1111/j.1462-2920.2008.01794.x · Cited by 79
Partial decontamination of rotifers with ultraviolet radiation: the effect of changes in the bacterial load and flora of rotifers on mortalities in start-feeding larval turbot
Munro, P., Henderson, R. J., Barbour, A., & Birkbeck, T. H. (1999) · Aquaculture · doi:10.1016/s0044-8486(98)00419-0 · Cited by 77
Carboxymethylcellulase activity in the digestive tracts of fish
Lindsay, G. J. H., & Harris, J. E. (1980) · Journal of Fish Biology · doi:10.1111/j.1095-8649.1980.tb03700.x · Cited by 76
A Model B-Cell Superantigen and the Immunobiology of B Lymphocytes
Silverman, G. J., & Goodyear, C. S. (2002) · Clinical Immunology · doi:10.1006/clim.2001.5143 · Cited by 75
Microbiological aspects of fish grown in treated wastewater
Buras, N., Duek, L., Niv, S., Hepher, B., & Sandbank, E. (1987) · Water Research · doi:10.1016/0043-1354(87)90092-3 · Cited by 74
Molecular monitoring and characterization of the faecal microbiota of healthy dogs during fructan supplementation
Vanhoutte, T., Huys, G. R. B., Brandt, E. D., Fahey, G. C., Jr., & Swings, J. (2005) · FEMS Microbiology Letters · doi:10.1016/j.femsle.2005.06.003 · Cited by 74
Histological, digestive, metabolic, hormonal and some immune factor responses in Atlantic salmon, Salmo salar L., fed genetically modified soybeans
Bakke-McKellep, A. M., Koppang, E. O., Gunnes, G., Sanden, M., HEMRE, G.-I., Landsverk, T., & Krogdahl, Å. (2007) · Journal of Fish Diseases · doi:10.1111/j.1365-2761.2007.00782.x · Cited by 73
Epithelium-associated bacteria in the gastrointestinal tract of Arctic charr (Salvelinus alpinus L.). An electron microscopical study
Ringø, E., Lødemel, J. B., Myklebust, R., Kaino, T., Mayhew, T. M., & Olsen, R. E. (2001) · Journal of Applied Microbiology · doi:10.1046/j.1365-2672.2001.01246.x · Cited by 73
Effect of intraperitoneal injection of immunostimulatory substances on allochthonous gut microbiota of Atlantic salmon (Salmo salar L.) determined using denaturing gradient gel electrophoresis
Liu, Y., Zhou, Z., Yao, B., Shi, P., He, S., Hølvold, L. B., & Ringø, E. (2008) · Aquaculture Research · doi:10.1111/j.1365-2109.2008.01934.x · Cited by 73
Drinking in yolk‐sac stage larvae of the halibut, Hippoglossus hippoglossus (L.)
Tytler, P., & Blaxter, J. H. S. (1988) · Journal of Fish Biology · doi:10.1111/j.1095-8649.1988.tb05388.x · Cited by 72
Studies on the heterotrophic bacteria in the gastrointestinal tract of fishes. I. The intestinal microflora of carp Cyprinus carpio, grass carp Ctenopharyngodon idella and tilapia Sarotherodon niloticus.
Sugita, H., TOKUYAMA, K., & Deguchi, Y. (1985) · NIPPON SUISAN GAKKAISHI · doi:10.2331/suisan.51.1325 · Cited by 72
Genetic and Physiological Characterization of the Intestinal Bacterial Microbiota of Bluegill (Lepomis macrochirus) with Three Different Feeding Habits
Uchii, K., Matsui, K., Yonekura, R., Tani, K., Kenzaka, T., Nasu, M., & Kawabata, Z. (2006) · Microbial Ecology · doi:10.1007/s00248-006-9018-z · Cited by 70
Assessment of microbial diversity in the river trout Salmo trutta fario L. intestinal tract identified by partial 16S rRNA gene sequence analysis
Skrodenytė-Arbačiauskienė, V., Sruoga, A., & Butkauskas, D. (2006) · Fisheries Science · doi:10.1111/j.1444-2906.2006.01189.x · Cited by 67
Intestinal Synthesis and Absorption of Vitamin B-12 in Channel Catfish
Limsuwan, T., & Lovell, R. T. (1981) · Journal of Nutrition · doi:10.1093/jn/111.12.2125 · Cited by 65
Cellulose digestibility in grass carp, Ctenopharyngodon idella and in goldfish, Carassius auratus
Lésel, R., Fromageot, C., & Lésel, M. (1986) · Aquaculture · doi:10.1016/0044-8486(86)90249-8 · Cited by 65
Intact antigen uptake in intestinal epithelial cells of marine fish larvae
Olafsen, J. A., & Hansen, G. H. (1992) · Journal of Fish Biology · doi:10.1111/j.1095-8649.1992.tb02562.x · Cited by 65
Enzyme producing bacteria in the gastrointestinal tracts of Labeo rohita (Hamilton) and Channa punctatus (Bloch)
Kar, N., & Ghosh, K. (2008) · DergiPark (Istanbul University) · Cited by 65
Characterisation of the Bacterial Community Associated with Early Stages of Great Scallop (Pecten maximus), Using Denaturing Gradient Gel Electrophoresis (DGGE)
Sandaa, R., Magnesen, T., Torkildsen, L., & Bergh, Ø. (2003) · Systematic and Applied Microbiology · doi:10.1078/072320203322346164 · Cited by 64
Adherence and invasive capacities of the fish pathogen Pasteurella piscicida
Magariños, B., Romalde, J. L., Noya, M., Barja, J. L., & Toranzo, A. E. (1996) · FEMS Microbiology Letters · doi:10.1111/j.1574-6968.1996.tb08130.x · Cited by 63
Phylogenetic analysis of intestinal bacteria of freshwater salmonSalmo salarand sea troutSalmo trutta truttaand diet
Skrodenytė-Arbačiauskienė, V., Sruoga, A., Butkauskas, D., & Skrupskelis, K. (2008) · Fisheries Science · doi:10.1111/j.1444-2906.2008.01656.x · Cited by 62
Phylogenetic analysis of intestinal bacteria and their adhesive capability in relation to the intestinal mucus of carp
Namba, A., Mano, N., & Hirose, H. (2006) · Journal of Applied Microbiology · doi:10.1111/j.1365-2672.2006.03204.x · Cited by 60
Survival, persistence and proliferation of Vibrio anguillarum in juvenile turbot, Scophthalmus maximus (L.), intestine and faeces
Olsson, Jöborn, Westerdahl, Blomberg, Kjelleberg, & Conway, P. L. (1998) · Journal of Fish Diseases · doi:10.1046/j.1365-2761.1998.00327.x · Cited by 59
Variations in the intestinal microflora of Tilapia reared in fresh and sea water.
Sakata, T., Okabayashi, J., & Kakimoto, D. (1980) · NIPPON SUISAN GAKKAISHI · doi:10.2331/suisan.46.313 · Cited by 59
Chapter 10 Pathogenesis and the gastrointestinal tract of growing fish
Birkbeck, T. H., & Ringø, E. (2005) · Biology of growing animals · doi:10.1016/s1877-1823(09)70043-8 · Cited by 58
An oral challenge for turbot larvae with Vibrio anguillarum
Chair, M., Dehasque, M., Poucke, S. V., Nelis, H. J. C. F., Sorgeloos, P., & Leenheer, A. P. D. (1994) · Aquaculture International · doi:10.1007/bf00123437 · Cited by 57
Isolation of Putative Probionts from the Intestines of Indian Major Carps
Sinha, A., Ghosh, S., & Sahu, C. (2007) · Israeli Journal of Aquaculture - Bamidgeh · doi:10.46989/001c.20527 · Cited by 57
Bacterial Pollution Indicators in the Intestinal Tract of Freshwater Fish
Geldreich, E. E., & Clarke, N. A. (1966) · Applied Microbiology · doi:10.1128/aem.14.3.429-437.1966 · Cited by 57
Intestinal microbiology
Farthing, M. J. G. (1985) · Gut · doi:10.1136/gut.26.11.1273-a · Cited by 56
The Relation between Fisheries Management and Limnology
Rigler, F. H. (1982) · Transactions of the American Fisheries Society · doi:10.1577/1548-8659(1982)111 · Cited by 53
Effect of germ-free rearing environment on gut development of larval sea bass (Dicentrarchus labrax L.)
Rekecki, A., Dierckens, K. R., Laureau, S., Boon, N., Bossier, P., & Broeck, W. V. D. (2009) · Aquaculture · doi:10.1016/j.aquaculture.2009.04.001 · Cited by 52
Molecular identification of intestinal microflora in Takifugu niphobles
Shiina, A., Itoi, S., Washio, S., & Sugita, H. (2005) · Comparative Biochemistry and Physiology Part D Genomics and Proteomics · doi:10.1016/j.cbd.2005.10.001 · Cited by 52
Random amplification of polymorphic DNA (RAPD) typing of carnobacteria isolated from hindgut chamber and large intestine of Atlantic cod (Gadus morhua l.)
Seppola, M., Olsen, R. E., Sandaker, E. K., Kanapathippillai, P., Holzapfel, W. H., & Ringø, E. (2005) · Systematic and Applied Microbiology · doi:10.1016/j.syapm.2005.07.006 · Cited by 50
Volatile fatty acids and anaerobic fermentation in temperate piscivorous and omnivorous freshwater fish
Smith, T. B., Wahl, D. H., & Mackie, R. I. (1996) · Journal of Fish Biology · doi:10.1111/j.1095-8649.1996.tb01479.x · Cited by 50
Yeasts isolated from the intestine of rainbow trout adhere to and grow in intestinal mucus.
Andlid, T. A., Vázquez‐Juárez, R., & Gustafsson, L. (1998) · PubMed · Cited by 50
Aspects of the Characterization, Identification, and Ecology of the Bacterial Flora Associated with the Surface of Stream-Incubating Pacific Salmon (Oncorhynchus) Eggs
Bell, G. R., Hoskins, G. E., & Hodgkiss, W. S. (1971) · Journal of the Fisheries Research Board of Canada · doi:10.1139/f71-232 · Cited by 48
Identification of Aeromonas Species Isolated from Freshwater Fish with the Microplate Hybridization Method
Sugita, H., Nakamura, T., Tanaka, K., & Deguchi, Y. (1994) · Applied and Environmental Microbiology · doi:10.1128/aem.60.8.3036-3038.1994 · Cited by 48
Bacteria in the gut of juvenile cod Gadus morhua fed live feed enriched with four different commercial diets
Korsnes, K., Nicolaisen, O., Skår, C. K., Nerland, A. H., & Bergh, Ø. (2006) · ICES Journal of Marine Science · doi:10.1016/j.icesjms.2005.10.012 · Cited by 46
Characterization of the goldfish fecal microflora by the fluorescent in situ hybridization method
Maidie, A., Yoshijima, T., & Sugita, H. (2003) · Fisheries Science · doi:10.1046/j.1444-2906.2003.00583.x · Cited by 46
Implication de la flore intestinale dans le métabolisme énergétique
Delzenne, N. M., & Cani, P. D. (2008) · médecine/sciences · doi:10.1051/medsci/2008245505 · Cited by 46
Host range susceptibility of Enterococcus sp. strains isolated from diseased turbot: possible routes of infection
Romalde, J. L., Magariños, B., Núñez, S., Barja, J. L., & Toranzo, A. E. (1996) · Applied and Environmental Microbiology · doi:10.1128/aem.62.2.607-611.1996 · Cited by 46
Screening of lactic acid bacteria from gastrointestinal tracts of marine fish for their potential use as probiotics
Hongpattarakere, T., Chanthachum, S., & Buntin, N. (2008) · DOAJ (DOAJ: Directory of Open Access Journals) · Cited by 46
Trophic effect of dietary lactosucrose on intestinal tunica muscularis and utilization of this sugar by gut microbes in red seabream Pagrus major, a marine carnivorous teleost, under artificial rearing
Kihara, M., Ohba, K., & Sakata, T. (1995) · Comparative Biochemistry and Physiology Part A Physiology · doi:10.1016/0300-9629(95)02037-3 · Cited by 44
Probiotics and prebiotics for fish culture, at the parting of the ways
Gatesoupe, F.-J. (2005) · HAL (Le Centre pour la Communication Scientifique Directe) · Cited by 42
Evaluation of candidate probiotic strains for gilthead sea bream larvae (Sparus aurata) using an in vivo approach
Makridis, P., Martins, S., Vercauteren, T., Driessche, K. V., Decamp, O., & Dinis, M. T. (2005) · Letters in Applied Microbiology · doi:10.1111/j.1472-765x.2005.01676.x · Cited by 42
An evaluation of methods to study the gut bacterial community composition of freshwater zooplankton
Peter, H., & Sommaruga, R. (2008) · Journal of Plankton Research · doi:10.1093/plankt/fbn061 · Cited by 42
Bacteriocin activity and probiotic activity of Aeromonas media
Gibson, L. F. (1998) · Journal of Applied Microbiology · doi:10.1111/j.1365-2672.1998.tb05304.x · Cited by 41
Pathways of bacterial contamination during egg incubation and larval rearing of turbot, Scophthalmus maximus
Keskin, M., Keskin, M., & Rosenthal, H. (1994) · Journal of Applied Ichthyology · doi:10.1111/j.1439-0426.1994.tb00138.x · Cited by 41

Research works printed but not linked: 31

Brock, 1997, Biology of Microorganism
DoBell, 1932, Anton Von Leewenhoek and Big ‘Little Animals’
Gatesoupe, 1991, The use of probiotics in fish hatcheries, results and prospect
Hatha, 2000, Bacterial flora of the intestines of farm raised freshwater fishes Catla catla, Labeo rohita and Ctenopharyngodon idella, Fishery Technology, 37, 59
Hoffmann, 2009, Stimulating immunity in fish and crustaceans, Aqua Culture Asia Pacific Magazine, 5, 22
Karunasagar, 1999, Diagnosis, treatment and prevention of microbial diseases of fish and shellfish, Current Science, 76, 387
Lesel, 1981, Nutrition Des Poissions, 89
Lesel, 1982, Influence d'un stress de manipulation sur le transit dela microflore bacterienne digestive chezla truite are-en-ciel Salmo garidneri Richarson, Acta Ecology Applie, 3, 23
Metchnikoff, 1901, Surlaflore du corps, Human Member Protocol of Manchester Litereture and Philosophical Society, 45, 1
Mickeniene, 1999, Bacterial flora in the digestive tract of native and alien species of crayfish in Lithuania, Freshwater Crayfish, 12, 279
Molinari, 2003, Bacterial microflora in the gastrointestinal tract of Nile tilapia, Oreochromis niloticus, cultured in a semi-intensive system, Acta Scientiarum Biological Sciences Maringa, 25, 267
Moriarty, 1990, Microbiology in Poikilotherms, 217
Ogbondeminu, 1993, The occurrence and distribution of enteric bacteria in fish and water of tropical aquaculture ponds in Nigeria, Journal of Aquaculture in Tropics, 8, 61
Ogbondeminu, 1993, Antibiotic resistance in enteric bacterial isolates from fish and water media, Journal of Aquaculture in Tropics, 8, 207
Onarheim, 1990, Microbiology in Poikilotherms, 197
Ringø, 1994, Microflora of arctic charr, Salvilinus alpinus (L). Gastrointestinal microflora of free living fish and effect of diet and salinity on intestinal microflora, Aquaculture and Fish Management, 25, 623
Rodriguez-Estrada, 2009, Effects of single and combined supplementation of Enterococcus faecalis, mannan oligosaccharide and polyhydrobutyric acid on growth performance and immune response of rainbow trout Oncorhynchus mykiss, Aquaculture Science, 57, 609
Sakai, 1979, Invasive routes of Aeromonas salmonicida salmonid furuculorts, Scientific Reports of the Hokkaido fish Hatchery, 34, 1
Sakata, 1989, Methods for Microbilogical Examinations, 141
Sakata, 1990, Microbiology in Poikiloterms, 171
Sera, 1974, Effect of the Ocean Environment on Microbial Activities, 467
Shcherbina, 1971, The reaction of the medium and the rate of absorption of nutrients in the intestine of carp, Journal of Ichthyology, 11, 81
Staykov, 2005, Lessons From the Past to Optimise the Future (Special Publication No 35, June 2005), 431
Sugita, 1981, Aerobic and anaerobic bacteria in the intestine of ayu, Pleloglossus altivelis, Bulletin of College of Agriculture and Veterinary Medicine, 38, 302
Sugita, 1982, Bacterial flora in the gastrointestine of Tilapia nilotica adapted in sea water, Bulletin of the Japanese Society of Scientific Fisheries, 48, 987, 10.2331/suisan.48.987 · DOI
Sugita, 1989, Bacterial flora of gastrointestine of freshwater fishes in river, Bulletin of Japanese Society Fisheries, 49, 1387, 10.2331/suisan.49.1387 · DOI
Sugita, 1992, Effect of culture conditions on the growth and vit. B12 productivity of anaerobic intestinal bacteria isolated from freshwater fishes, Bulletin of College of Agriculture and Veterinary Medicine, Nihon University, 9, 122
Syvokiene, 1989, Simbiontnoe Pishchevarenie u Gidrobiontov Inasekomykh
Wang, 1994, Study on the intestinal microflora of carp in freshwater cultured pond, Acta Hydrobiologica, 18, 354
Westerdahl, 1994, Characterisation of turbot (Scophthalmus maximus) associated bacteria with inhibitory effect against the fish pathogen Vibrio anguillarum, Acta Microbiology Immunology Hungerica, 41, 403
Zaman, 1994, The Proceeding of the Third Asian Fisheries Forum, 314

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Authors: Nayak, S. K.
Affiliations: Nihon University (JP)
Corresponding author: Nayak, Sukanta K
ORCID: Nayak, Sukanta K
Venue: Aquaculture Research
Publisher: Hindawi Limited
Published: 2010-06-16
Volume: 41
Issue: 11
Pages: 1553-1573
ISSN: 1355-557X (ISSN-L)
DOI: 10.1111/j.1365-2109.2010.02546.x
OpenAlex: W1912394394
Cited by: 1,073
References: 240
Citations by year: 2026: 74 · 2025: 97 · 2024: 85 · 2023: 104 · 2022: 111 · 2021: 109 · 2020: 94 · 2019: 80 · 2018: 82 · 2017: 58 · 2016: 36 · 2015: 30 · 2014: 40 · 2013: 30 · 2012: 22
FWCI: 9.65
Type: journal article
Language: en
Open access: bronze
doi.org
Licence: doi.wiley.com/10.1002/tdm_license_1.1 (tdm, 1903 d)
Locations: Aquaculture Research (publishedVersion)
Funders: Nihon University
Directorate for Biological Sciences
Topics: Life Sciences › Immunology and Microbiology › Immunology › Aquaculture disease management and microbiota
Life Sciences › Agricultural and Biological Sciences › Aquatic Science › Aquaculture Nutrition and Growth
Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Gut microbiota and health
Keywords: gut microbiota, fish gut bacteria, fish nutrition, fish immunity, fish disease, probiotics, prebiotics, synbiotics, gut microbiota modulation, fish health management, culture-independent identification

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