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A multifaceted genomics approach allows the isolation of the rice Pia ‐blast resistance gene consisting of two adjacent NBS‐LRR protein genes
Open accessAbstract
Summary: The Oryza sativa (rice) resistance gene Pia confers resistance to the blast fungus Magnaporthe oryzae carrying the AVR‐Pia avirulence gene. To clone Pia , we employed a multifaceted genomics approach. First, we selected 12 R ‐gene analog (RGA) genes encoding nucleotide binding site‐leucine rich repeats (NBS‐LRRs) proteins from a region on chromosome 11 that shows linkage to Pia . By using seven rice accessions, we examined the association between Pia phenotypes and DNA polymorphisms in the 10 genes, which revealed three genes ( Os11gRGA3–Os11gRGA5 ) exhibiting a perfect association with the Pia phenotypes. We also screened ethyl methane sulfonate (EMS)‐treated mutant lines of the rice cultivar ‘Sasanishiki’ harboring Pia , and isolated two mutants that lost the Pia phenotype. DNA sequencing of Os11gRGA3–Os11gRGA5 from the two mutant lines identified independent mutations of major effects in Os11gRGA4 . The wild‐type ‘Sasanishiki’ allele of Os11gRGA4 ( SasRGA4 ) complemented Pia function in both mutants, suggesting that SasRGA4 is necessary for Pia function. However, when the rice cultivar ‘Himenomochi’ lacking Pia was transfected with SasRGA4 , the Pia phenotype was not recovered. An additional complementation study revealed that the two NBS‐LRR‐type R genes, SasRGA4 and SasRGA5 , that are located next to each other and oriented in the opposite direction are necessary for Pia function. A population genetics analysis of SasRGA4 and SasRGA5 suggests that the two genes are under long‐term balancing selection.
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Disease Resistance Gene Analogs (RGAs) in Plants
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Metadata
- Authors
- Okuyama, Y., Kanzaki, H., Abe, A., Yoshida, K., Tamiru, M., Saitoh, H., Fujibe, T., Matsumura, H., Shenton, M., Galam, D. C., Undan, J., Ito, A., Sone, T., & Terauchi, R.
- Venue
- The Plant Journal
- Publisher
- Wiley
- Published
- 2011-03-07
- Volume
- 66
- Issue
- 3
- Pages
- 467-479
- ISSN
- 0960-7412 (ISSN-L)
- 1365-313X
- OpenAlex
- W1645663982
- Cited by
- 368
- References
- 53
- FWCI
- 31.24
- Type
- journal article
- Language
- en
- Open access
- bronze
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- Okuyama, Y., Kanzaki, H., Abe, A., Yoshida, K., Tamiru, M., Saitoh, H., Fujibe, T., Matsumura, H., Shenton, M., Galam, D. C., Undan, J., Ito, A., Sone, T., & Terauchi, R. (2011). A multifaceted genomics approach allows the isolation of the rice Pia ‐blast resistance gene consisting of two adjacent NBS‐LRR protein genes. The Plant Journal. https://doi.org/10.1111/j.1365-313x.2011.04502.x
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