Physiological ecology of cyanobacteria in microbial mats and other communities
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summary: In this review some aspects of the physiological ecology of cyanobacteria are discussed by taking a microbial mat as an example. The majority of microbial mats are built and dominated by cyarsobacteria which are primary producers at the basis of the microbial foodweb in microbial mats. These micro‐scale ecosystems are characterized by steep and fluctuating physico‐chemical gradients of which those of light, oxygen and sulphide are the most conspicuous. Light is strongly attenuated in the sediment, and owing to constant sedimentation, the mat‐forming cyanobacteria have to move upwards towards the light. However, at the sediment surface, light intensity, particularly in the u.v. part of the spectrum, is often deleterious. The gliding movement of the cyanobacteria, with photo‐ and chemotaxis, allows the organism to position itself in a thin layer at optimal conditions. The organic matter produced by cyanobacterial photosynthesis is decomposed by the ruicrobial community. Sulphate‐reducing bacteria are important in the end‐oxidation of the organic matter. These organisms are obligate anaerobes and produce sulphide. Gradients of sulphide and oxygen move up and down in the sediment as a response to diurnal variations of light intensity. Cyanobacteria, therefore, are sometimes exposed to large concentrations of the extremely toxic sulphide. Some species are capable of sulphide‐dependent anoxygenic photosynthesis. Other cyanobacteria show increased rates of oxygenic photosynthesis in the presence of sulphide and have mechanisms to oxidize sulphide while avoiding sulphide toxicity. Iron might play an important role in this process. Under anoxic conditions in the dark, mat‐forming cyanobacteria switch to fermentative metabolism. Many species are also capable of fermentative reduction of elemental sulphur to sulphide. The gradients of sulphide and oxygen are of particular importance for nitrogen fixation. Very few microbial mats are formed by heterocystous cyanobacteria, which are best adapted to diazntrophic growth. However, these organisms probably cannot tolerate greater concentrations of sulphide or anoxic conditions or both. Under such conditions non‐heterocystous cyanobacteria become dominant as diazotrophs. These organisms avoid conditions of oxygen supersaturation. In the ecosystem, nitrogen fixation and photosynthesis might be separated temporally as well as spatially. In addition, non‐heterocystous diazotrophic cyanobacteria have mechanisms at the subcellular level to protect the oxygen‐sensitive nitrogenase from inaction. CONTENTS Summary 1 I. Introduction 2 II. Microbial mats 3 III. Cyanobacteria in light gradients 7 IV. Dark metabolism 10 V. Interactions with sulphide 13 VI. Nitrogen fixation 16 VII. References 28
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Exploring habitability and diversity within a single location consisting of multiple environments has been a rewarding approach in microbial ecology, and targeting environmental gradients for detection of life has been promising.
“Exploring habitability and diversity within a single location consisting of multiple environments, e.g., the layers of microbial mats or within ocean sediments, has been a rewarding approach in microbial ecology (e.g., Jangir et al. 2016;Stal 1995), and targeting environmental gradients for detection of life has been promising (Cabrol et al. 2007).”
From Environmental Adaptation from the Origin of Life to the Last Universal Common Ancestor (2018) · cites this paper as Stal 1995
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Gallon, J., LaRue, T. A. G., & Kurz, W. G. W. (1974) · Canadian Journal of Microbiology · doi:10.1139/m74-254 · Cited by 52 · see citing works
Microbial mats in coastal environments
Stal, L. J. (1994) · Springer eBooks · doi:10.1007/978-3-642-78991-5_2 · Cited by 50 · see citing works
Self-citationPhysiology of sulfide tolerance in a thermophilic Oscillatoria
Castenholz, R. W., & Utkilen, H. (1984) · Archives of Microbiology · doi:10.1007/bf00410894 · Cited by 50 · see citing works
Stal, L. J., & Bergman, B. (1990) · Planta · doi:10.1007/bf00197123 · Cited by 49 · see citing works
Self-citationNitrogenase in free-living and symbiotic cyanobacteria: Immunoelectron microscopic localization
Bergman, B., Lindblad, P. C., & Rai, A. N. (1986) · FEMS Microbiology Letters · doi:10.1111/j.1574-6968.1986.tb01502.x · Cited by 49 · see citing works
Carpenter, E., Chang, J., Cottrell, M. T., et al. (1990) · Marine Ecology Progress Series · doi:10.3354/meps065151 · Cited by 48 · see citing works
Compartmentalisation of nitrogenase in a non-heterocystous cyanobacterium:Trichodesmium contortum
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GLIDING MOTILITY IN THE BLUE-GREEN ALGA OSCILLATORIA PRINCEPS1
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On the significance of solar ultraviolet radiation for the ecology of microbial mats
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Motility of the cyanobacteriumMicrocoleus chthonoplastesin mud
Whale, G. F., & Walsby, A. E. (1984) · British Phycological Journal · doi:10.1080/00071618400650121 · Cited by 43 · see citing works
pH dependent sulphide toxicity to oxygenic photosynthesis in cyanobacteria
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Microprofiles of photosynthesis and oxygen concentration inMicrocystissp. scums
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Sulfide‐dependent hydrogen evolution in the cyanobacterium Oscillatoria limnetica
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N2 Fixation in non-heterocystous Cyanobacteria: An Overview
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Self-citationPrufert-Bebout, L., & García‐Pichel, F. (1994) · Springer eBooks · doi:10.1007/978-3-642-78991-5_12 · Cited by 37 · see citing works
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Some aspects of the ecophysiology of cyanobacteria
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The carbon isotope biogeochemistry of microbial mats
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Glycolate metabolism in cyanobacteria
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Diffusion processes and boundary layers in microbial mats
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Growth of the cyanobacterium Microcoleus chtonoplastes on sulfide
de Wit, R., van Boekel, W. H. M., & van Gemerden, H. (1988) · FEMS Microbiology Letters · doi:10.1111/j.1574-6968.1988.tb02665.x · Cited by 30 · see citing works
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Posttranslational modification of nitrogenase
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A model of the phototactic reaction chain of the cyanobacterium Anabaena variabilis
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‘Respiratory protection’ of the nitrogenase in dinitrogen-fixing cyanobacteria
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Dark anaerobic nitrogen fixation (acetylene reduction) in the cyanobacteriumOscillatoriasp.
Stal, L. J., & Heyer, H. (1987) · FEMS Microbiology Letters · doi:10.1111/j.1574-6968.1987.tb02360.x · Cited by 29 · see citing works
Self-citationDiurnal Variation in Algal Acetylene Reduction (Nitrogen Fixation) in Situ
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Sulphate‐limited growth in the N2‐fixing unicellular cyanobacterium Gloeothece (Nägeli) sp. PCC 6909
Calvo, J. J. O., & Stal, L. J. (1994) · New Phytologist · doi:10.1111/j.1469-8137.1994.tb04011.x · Cited by 27 · see citing works
Self-citationNovel metabolic capacities of sulfate-reducing bacteria, and their activities in microbial mats
Cypionka, H. (1994) · Springer eBooks · doi:10.1007/978-3-642-78991-5_38 · Cited by 25 · see citing works
Untersuchungen zur Photokinesis von Anabaena variabilis K�tzing
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Self-citationDie Chemotaxis der Oscillarien und ihre Bewegungserscheinungen Uberhaupt.
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Belkin, S., & Padan, E. (1983) · PLANT PHYSIOLOGY · doi:10.1104/pp.72.3.825 · Cited by 19 · see citing works
Thiosulphate as Electron Donor in the Blue-green Alga Anacystis nidulans
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Heterocystous versus non-heterocystous cyanobacteria in microbial mats
Stal, L. J., Paerl, H. W., Bebout, B. M., & Villbrandt, M. (1994) · Springer eBooks · doi:10.1007/978-3-642-78991-5_41 · Cited by 18 · see citing works
Self-citationOxidation of sulfide to thiosulfate by
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Nitrogen fixation dynamics in microbial mats
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Interactions between phototrophic bacteria in sediment ecosystems
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TURBULENCE AND PLANKTONIC NITROGEN-FIXATION - A MESOCOSM EXPERIMENT (VOL 38, PG 1696, 1993)
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Homoacetic fermentation in the cyanobacteriumNostocsp. strain Cc fromCycas circinalis
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Signal perception and amplification in photoresponses of cyanobacteria
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Photosynthesis and Nitrogen Fixation in the Unicellular Cyanobacterium Gloeothece PCC 6909
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Self-citationNitrogenase inAnabaena flos-aquae filaments lacking heterocysts
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Research works printed but not linked: 1
- Whale GF, Walsby AE. 1984. Motility of the cyanobacterium Microcoleus chthonoplastes in mud. British Phycological Journal 19:117-123.
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Applications of cyanobacteria in biotechnology
Abed, R. M. M., Dobretsov, S., & Sudesh, K. (2009) · Journal of Applied Microbiology · doi:10.1111/j.1365-2672.2008.03918.x · Cited by 528 · see citing works
Cyanobacteria and the Great Oxidation Event: evidence from genes and fossils
Schirrmeister, B. E., Gugger, M., & Donoghue, P. C. J. (2015) · Palaeontology · doi:10.1111/pala.12178 · Cited by 304 · see citing works
Cyanobacterial Mats and Stromatolites
Stal, L. J. (2012) · Ecology of Cyanobacteria II · doi:10.1007/978-94-007-3855-3_4 · Cited by 305 · see citing works
Self-citationStal, L. (1997) · FEMS Microbiology Reviews · doi:10.1016/s0168-6445(97)00056-9 · Cited by 301 · see citing works
Self-citationBandyopadhyay, A., Elvitigala, T., Welsh, E., Stöckel, J., Liberton, M., Min, H., Sherman, L. A., & Pakrasi, H. B. (2011) · mBio · doi:10.1128/mbio.00214-11 · Cited by 102 · see citing works
Carbohydrate metabolism and respiration in algae
Raven, J. A., & Beardall, J. (2003) · Advances in photosynthesis and respiration · doi:10.1007/978-94-007-1038-2_10 · Cited by 90 · see citing works
Environmental Adaptation from the Origin of Life to the Last Universal Common Ancestor
Cantine, M. D., & Fournier, G. P. (2018) · Origins of Life and Evolution of Biospheres · doi:10.1007/s11084-017-9542-5 · Cited by 54 · see citing works
Riding, R. (2011) · Encyclopedia of Earth Sciences Series · doi:10.1007/978-1-4020-9212-1_63 · Cited by 39 · see citing works
- Authors
- STAL, L. J.
- Affiliations
- University of Amsterdam (NL)
- Corresponding author
- STAL, LUCAS J.
- ORCID
- STAL, LUCAS J.
- Venue
- New Phytologist
- Publisher
- Wiley
- Published
- 1995-09
- Volume
- 131
- Issue
- 1
- Pages
- 1-32
- ISSN
- 0028-646X (ISSN-L)
- 1469-8137
- OpenAlex
- W1963993817
- Cited by
- 425
- References
- 170
- Citations by year
- 2026: 7 · 2025: 5 · 2024: 12 · 2023: 14 · 2022: 11 · 2021: 17 · 2020: 13 · 2019: 10 · 2018: 23 · 2017: 14 · 2016: 19 · 2015: 24 · 2014: 14 · 2013: 16 · 2012: 16
- FWCI
- 11.51
- Type
- journal article
- Language
- en
- Open access
- green
- handle.uba.uva.nl
- Locations
- New Phytologist (publishedVersion)
- PubMed (publishedVersion)
- UvA-DARE (University of Amsterdam) (publishedVersion)
- UvA-DARE (University of Amsterdam) (submittedVersion)
- Data Archiving and Networked Services (DANS) (submittedVersion, other-oa)
- Topics
- Physical Sciences › Environmental Science › Ecology › Microbial Community Ecology and Physiology
- Physical Sciences › Environmental Science › Environmental Chemistry › Aquatic Ecosystems and Phytoplankton Dynamics
- Life Sciences › Agricultural and Biological Sciences › Ecology, Evolution, Behavior and Systematics › Biocrusts and Microbial Ecology
- Keywords
- cyanobacteria, microbial mats, ecophysiology, light gradient, oxygen gradients, chemotaxis, gliding motility, sulfide toxicity, sulfate-reducing bacteria, sulfide oxidation, fermentative metabolism, nitrogen fixation, diazotrophic cyanobacteria, heterocystous cyanobacteria, photosynthesis
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