The DOI matches its Crossref record; 6 of the 6 references it cites were found in a registry or an index.
DELIMITING SPECIES USING MULTILOCUS DATA: DIAGNOSING CRYPTIC DIVERSITY IN THE SOUTHERN CAVEFISH,TYPHLICHTHYS SUBTERRANEUS(TELEOSTEI: AMBLYOPSIDAE): SPECIES DELIMITATION IN CAVEFISH
Abstract
A major challenge facing biodiversity conservation and management is that a significant portion of species diversity remains undiscovered or undescribed. This is particularly evident in subterranean animals in which species delimitation based on morphology is difficult because differentiation is often obscured by phenotypic convergence. Multilocus genetic data constitute a valuable source of information for species delimitation in such organisms, but until recently, few methods were available to objectively test species delimitation hypotheses using genetic data. Here, we use recently developed methods for discovering and testing species boundaries and relationships using a multilocus dataset in a widely distributed subterranean teleost fish, Typhlichthys subterraneus, endemic to Eastern North America. We provide evidence that species diversity in T. subterraneus is currently underestimated and that the picture of a single, widely distributed species is not supported. Rather, several morphologically cryptic lineages comprise the diversity in this clade, including support for the recognition of T. eigenmanni. The high number of cryptic species in Typhlichthys highlights the utility of multilocus genetic data in delimiting species, particularly in lineages that exhibit slight morphological disparity, such as subterranean organisms. However, results depend on sampling of individuals and loci; this issue needs further study.
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Excoffier, L., Smouse, P. E., & Quattro, J. M. (1992) · Genetics · doi:10.1093/genetics/131.2.479 · Cited by 13,929
Bayesian inference of species trees from multilocus data
Heled, J., & Drummond, A. J. (2010) · Molecular Biology and Evolution · doi:10.1093/molbev/msp274 · Cited by 2,453
DAYRAT, B. (2005) · Biological Journal of the Linnean Society · doi:10.1111/j.1095-8312.2005.00503.x · Cited by 2,007
DNA barcoding: error rates based on comprehensive sampling
Meyer, C. P., & Paulay, G. (2005) · PLoS Biology · doi:10.1371/journal.pbio.0030422 · Cited by 1,957
Genome-scale approaches to resolving incongruence in molecular phylogenies.
Rokas, A., Williams, B. L., King, N., & Carroll, S. B. (2003) · Nature · doi:10.1038/nature02053 · Cited by 1,512
Bayesian species delimitation using multilocus sequence data
Yang, Z., & Rannala, B. (2010) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0913022107 · Cited by 1,405
Cited by
How to fail at species delimitation
Carstens, B. C., Pelletier, T. A., Reid, N. M., & Satler, J. D. (2013) · Molecular Ecology · doi:10.1111/mec.12413 · Cited by 1,248
Coalescent-based species delimitation in an integrative taxonomy
Fujita, M. K., Leaché, A. D., Burbrink, F. T., McGuire, J. A., & Moritz, C. (2012) · Trends in Ecology & Evolution · doi:10.1016/j.tree.2012.04.012 · Cited by 893
Unguided Species Delimitation Using DNA Sequence Data from Multiple Loci
Yang, Z., & Rannala, B. (2014) · Molecular Biology and Evolution · doi:10.1093/molbev/msu279 · Cited by 566
Metadata
- Authors
- Niemiller, M. L., Near, T. J., & Fitzpatrick, B. M.
- Venue
- Evolution
- Publisher
- Oxford University Press (OUP)
- Published
- 2011-11-01
- Volume
- 66
- Issue
- 3
- Pages
- 846-866
- ISSN
- 0014-3820 (ISSN-L)
- OpenAlex
- W1907561617
- Cited by
- 161
- References
- 6
- FWCI
- 10.50
- Type
- journal article
- Language
- en
- Open access
- closed
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- CoChat. (2026). Citation check: DELIMITING SPECIES USING MULTILOCUS DATA: DIAGNOSING CRYPTIC DIVERSITY IN THE SOUTHERN CAVEFISH,TYPHLICHTHYS SUBTERRANEUS(TELEOSTEI: AMBLYOPSIDAE): SPECIES DELIMITATION IN CAVEFISH. https://app.cochat.ai/papers/10.1111/j.1558-5646.2011.01480.x
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- Niemiller, M. L., Near, T. J., & Fitzpatrick, B. M. (2012). DELIMITING SPECIES USING MULTILOCUS DATA: DIAGNOSING CRYPTIC DIVERSITY IN THE SOUTHERN CAVEFISH,TYPHLICHTHYS SUBTERRANEUS(TELEOSTEI: AMBLYOPSIDAE): SPECIES DELIMITATION IN CAVEFISH. Evolution. https://doi.org/10.1111/j.1558-5646.2011.01480.x
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