The DOI matches its Crossref record; 76 of the 76 references it cites were found in a registry or an index.
Where is positional uncertainty a problem for species distribution modelling?
Abstract
Species data held in museum and herbaria, survey data and opportunistically observed data are a substantial information resource. A key challenge in using these data is the uncertainty about where an observation is located. This is important when the data are used for species distribution modelling (SDM), because the coordinates are used to extract the environmental variables and thus, positional error may lead to inaccurate estimation of the species–environment relationship. The magnitude of this effect is related to the level of spatial autocorrelation in the environmental variables. Using local spatial association can be relevant because it can lead to the identification of the specific occurrence records that cause the largest drop in SDM accuracy. Therefore, in this study, we tested whether the SDM predictions are more affected by positional uncertainty originating from locations that have lower local spatial association in their predictors. We performed this experiment for Spain and the Netherlands, using simulated datasets derived from well known species distribution models (SDMs). We used the K statistic to quantify the local spatial association in the predictors at each species occurrence location. A probabilistic approach using Monte Carlo simulations was employed to introduce the error in the species locations. The results revealed that positional uncertainty in species occurrence data at locations with low local spatial association in predictors reduced the prediction accuracy of the SDMs. We propose that local spatial association is a way to identify the species occurrence records that require treatment for positional uncertainty. We also developed and present a tool in the R environment to target observations that are likely to create error in the output from SDMs as a result of positional uncertainty.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Breiman, L. (2001) · Machine Learning · doi:10.1023/a:1010933404324 · Cited by 133,538
The Nature of Statistical Learning Theory
Vapnik, V. N. (1995) · doi:10.1007/978-1-4757-2440-0 · Cited by 39,138
Greedy function approximation: A gradient boosting machine
Friedman, J. H. (2001) · The Annals of Statistics · doi:10.1214/aos/1013203451 · Cited by 30,731
(2005) · Statistics for Biology and Health · doi:10.1007/0-387-27255-0_9 · Cited by 20,133
Classification and Regression by randomForest
Liaw, A. I., & Wiener, M. C. (2007) · Cited by 18,594
Maximum entropy modeling of species geographic distributions
Phillips, S. J., Anderson, R. P., & Schapire, R. E. (2006) · Ecological Modelling · doi:10.1016/j.ecolmodel.2005.03.026 · Cited by 15,396
Local Indicators of Spatial Association—LISA
Anselin, L. (1995) · Geographical Analysis · doi:10.1111/j.1538-4632.1995.tb00338.x · Cited by 12,919
Dormann, C. F., Elith, J., Bacher, S., Buchmann, C., Carl, G., Carré, G., Marquéz, J. R. G., Gruber, B., Lafourcade, B., Leitão, P. J., et al. (2013) · Ecography · doi:10.1111/j.1600-0587.2012.07348.x · Cited by 9,998
Self-citationNovel methods improve prediction of species’ distributions from occurrence data
Elith*, J., H. Graham*, C., P. Anderson, R., Dudík, M., Ferrier, S., Guisan, A., J. Hijmans, R., Huettmann, F., R. Leathwick, J., Lehmann, A., et al. (2006) · Ecography · doi:10.1111/j.2006.0906-7590.04596.x · Cited by 9,088
Cressie, N. (1992) · Terra Nova · doi:10.1111/j.1365-3121.1992.tb00605.x · Cited by 8,823
Cited by
Multidimensional biases, gaps and uncertainties in global plant occurrence information
Meyer, C., Weigelt, P., & Kreft, H. (2016) · Ecology Letters · doi:10.1111/ele.12624 · Cited by 572
Want to model a species niche? A step-by-step guideline on correlative ecological niche modelling
Sillero, N., Arenas-Castro, S., Enriquez‐Urzelai, U., Vale, C. G., Sousa-Guedes, D., Martínez-Freiría, F., Real, R., & Barbosa, A. M. (2021) · Ecological Modelling · doi:10.1016/j.ecolmodel.2021.109671 · Cited by 456
The global distribution of known and undiscovered ant biodiversity
Kass, J. M., Guénard, B., Dudley, K. L., Jenkins, C. N., Azuma, F., Fisher, B. L., Parr, C. L., Gibb, H., Longino, J. T., Ward, P. S., et al. (2022) · Science Advances · doi:10.1126/sciadv.abp9908 · Cited by 194
Species Distribution Modeling for Machine Learning Practitioners: A Review
Beery, S., Cole, E., Parker, J., Perona, P., & Winner, K. (2021) · ACM SIGCAS Conference on Computing and Sustainable Societies · doi:10.1145/3460112.3471966 · Cited by 100
Earth Observation, Spatial Data Quality, and Neglected Tropical Diseases
Hamm, N. A. S., Soares Magalhães, R. J., & Clements, A. C. A. (2015) · PLOS Neglected Tropical Diseases · doi:10.1371/journal.pntd.0004164 · Cited by 48
Self-citation
Metadata
- Authors
- Naimi, B., Hamm, N. A. S., Groen, T. A., Skidmore, A. K., & Toxopeus, A. G.
- Venue
- Ecography
- Publisher
- Wiley
- Published
- 2013-09-04
- Volume
- 37
- Issue
- 2
- Pages
- 191-203
- ISSN
- 0906-7590 (ISSN-L)
- 1600-0587
- OpenAlex
- W2168113371
- Cited by
- 1,901
- References
- 76
- FWCI
- 3.85
- Type
- journal article
- Language
- en
- Open access
- closed
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
How to cite
Cite CoChat for the checks on this page, and the paper for its own findings.
- This page
- CoChat. (2026). Citation check: Where is positional uncertainty a problem for species distribution modelling? https://app.cochat.ai/papers/10.1111/j.1600-0587.2013.00205.x
- The paper
- Naimi, B., Hamm, N. A. S., Groen, T. A., Skidmore, A. K., & Toxopeus, A. G. (2014). Where is positional uncertainty a problem for species distribution modelling? Ecography. https://doi.org/10.1111/j.1600-0587.2013.00205.x
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.