Programming DNA Tube Circumferences

Design and self-assembly of two-dimensional DNA crystals

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DNA in a material world

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DNA-Templated Self-Assembly of Protein Arrays and Highly Conductive Nanowires

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Programming biomolecular self-assembly pathways

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DNA nanomachines

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DNA double-crossover molecules

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Rational Design of DNA Nanoarchitectures

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Design and Characterization of Programmable DNA Nanotubes

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DNA-nanotube-induced alignment of membrane proteins for NMR structure determination

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An Overview of Structural DNA Nanotechnology

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DNA Nanoribbon‐Templated Self‐Assembly of Ultrasmall Fluorescent Copper Nanoclusters with Enhanced Luminescence

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Fuel‐Powered DNA Nanomachines for Biosensing and Cancer Therapy

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An Analysis of the Capturing and Passing Ability of a DNA Origami Nanocarrier with the Aid of Molecular Dynamics Simulation

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Folding and Characterization of a Bio-responsive Robot from DNA Origami

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DNA self-assembly: prospectus and its future application

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Synthetic DNA filaments: from design to applications

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DNA nanochannels

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Fabrication of multi-layered DNA nanostructures using single-strand and double-crossover tile connectors

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Fabrication of zigzag and folded DNA nanostructures by an angle control scheme

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Synthesis and characterization of doxorubicin hydrochloride drug molecule-intercalated DNA nanostructures

Gnapareddy, B., Deore, P. M., Dugasani, S. R., Kim, S., & Park, S. H. (2018) · Current Applied Physics · doi:10.1016/j.cap.2018.07.008 · Cited by 7

Chiral DNA Nanotubes Self‐Assembled from Building Blocks with Tailorable Curvature and Twist

Dong, N., Sun, Y., Sun, G., Zhang, L., & Sun, S. (2022) · Small · doi:10.1002/smll.202204996 · Cited by 7

A Novel Self-Assembling DNA Nano Chip for Rapid Detection of Human Papillomavirus Genes

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A four-helix bundle DNA nanostructure with binding pockets for pyrimidine nucleotides

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Room Temperature Study of Seeding Growth on Two-Dimensional DNA Nanostructure

Ji, B., Song, J., Wang, D., Kenaan, A., Zhu, Q., Wang, J., Sønderskov, S. M., & Dong, M. (2019) · Langmuir · doi:10.1021/acs.langmuir.8b03804 · Cited by 7

Rapid self‐assembly of γPNA nanofibers at constant temperature

Kumar, S., Dhami, I., Thadke, S. A., Ly, D. H., & Taylor, R. E. (2021) · Biopolymers · doi:10.1002/bip.23463 · Cited by 7

A long-staple design approach towards the scalable production of scaffolded DNA origami

Lee, C., Kim, Y., Jeon, K., Ryu, T., & Kim, D. (2025) · Nanoscale Horizons · doi:10.1039/d5nh00357a · Cited by 6

Modulating transformation of DNA origami nanoarray via sequence design

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High-fidelity transfer of area-selective atomic layer deposition grown HfO2 through DNA origami-assisted nanolithography

Yuan, X., Xiao, D., Yao, W., Zhang, Z., Yang, L., Zhang, L., Zeng, Y., Liao, J., Luo, S., Li, C., et al. (2022) · Nano Research · doi:10.1007/s12274-022-4149-1 · Cited by 6

The restoration of DNA structures by the dry–wet method

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Self-assembly of large RNA structures: learning from DNA nanotechnology

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Contact-free Mechanical Manipulation of Biological Materials

Schnauß, J., Käs, J. A., & Smith, D. M. (2017) · Springer handbooks · doi:10.1007/978-3-662-54357-3_20 · Cited by 6

In‐Situ Configuration Studies on Segmented DNA Origami Nanotubes

Zhu, B., Guo, J., Zhang, L., Pan, M., Jing, X., Wang, L., Liu, X., & Zuo, X. (2019) · ChemBioChem · doi:10.1002/cbic.201800727 · Cited by 6

Ternary representation of N ( N = 1 or 2)-input and 1-output algorithmic self-assembly demonstrated by DNA

Park, S., Tandon, A., Cho, H. J., Raza, M. T., Lee, S. J., Chopade, P., Ha, T. H., & Park, S. H. (2019) · Nanotechnology · doi:10.1088/1361-6528/ab5472 · Cited by 6

Production of semiconducting gold–DNA nanowires by application of DC bias

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Self‐Assembly of DNA Nanostructures Using Three‐Way Junctions on Small Circular DNAs

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Hairpin embedded DNA lattices grown on a mica substrate

Bashar, S., Lee, C., Lee, J., Kim, B., Gnapareddy, B., Shin, J., Dugasani, S. R., & Park, S. H. (2013) · RSC Advances · doi:10.1039/c3ra44320e · Cited by 6

Self-assembly of Complex Two-dimensional Shapes from Single-stranded DNA Tiles

Wei, B., Vhudzijena, M. K., Robaszewski, J., & Yin, P. (2015) · Journal of Visualized Experiments · doi:10.3791/52486 · Cited by 7

Edit Distance Under Block Operations

Şahinalp, S. C. (2008) · Encyclopedia of Algorithms · doi:10.1007/978-0-387-30162-4_122 · Cited by 6

Streptavidin bound DNA open tube and Zn2+-doped DNA open lattice

Vellampatti, S., Mitta, S. B., Kim, J. A., Hwang, T., Dugasani, S. R., Kim, T., & Park, S. H. (2015) · Current Applied Physics · doi:10.1016/j.cap.2015.02.020 · Cited by 5

How Small DNA Minicircles Can Be Applied to Construct DNA Nanotubes?

Afshan, N., Zheng, H., & Xiao, S. (2015) · Chinese Journal of Chemistry · doi:10.1002/cjoc.201500561 · Cited by 5

Structural and functional stabilities of artificially designed DNA ultra-thin films grown by silica Assistance

Lee, J., Koo, J., Hwang, S. U., Min, S., Ahn, S. J., Roh, Y., & Park, S. H. (2012) · Current Applied Physics · doi:10.1016/j.cap.2012.02.061 · Cited by 5

DNA nanotechnology provides an avenue for the construction of programmable dynamic molecular systems

Sato, Y., & Suzuki, Y. (2021) · Biophysics and Physicobiology · doi:10.2142/biophysico.bppb-v18.013 · Cited by 5

Design, Mechanical Properties, and Dynamics of Synthetic DNA Filaments

Stenke, L. J., & Saccà, B. (2022) · Bioconjugate Chemistry · doi:10.1021/acs.bioconjchem.2c00312 · Cited by 5

Design of DNA-Based Artificial Transmembrane Channels for Biosensing and Biomedical Applications

Xu, W., Chen, H., Li, Y., Liu, S., Wang, K., & Liu, J. (2023) · Chemosensors · doi:10.3390/chemosensors11090508 · Cited by 5

Nondeterministic self-assembly with asymmetric interactions

Tesoro, S., Göpfrich, K., Kartanas, T., Keyser, U. F., & Ahnert, S. E. (2016) · Physical review. E · doi:10.1103/physreve.94.022404 · Cited by 6

Self-assembly programming of DNA polyominoes

Ong, H. S., Syafiq-Rahim, M., Kasim, N. H. A., Firdaus‐Raih, M., & Ramlan, E. I. (2016) · Journal of Biotechnology · doi:10.1016/j.jbiotec.2016.08.017 · Cited by 5

DNA Nanotubes as a Versatile Tool to Study Semiflexible Polymers

Schnauß, J., Glaser, M., Lorenz, J. S., Schuldt, C., Möser, C., Sajfutdinow, M., Händler, T., Käs, J. A., & Smith, D. M. (2017) · Journal of Visualized Experiments · doi:10.3791/56056 · Cited by 5

Physical Properties of Single Cells and Collective Behavior

Kubitschke, H., Morawetz, E. W., Käs, J. A., & Schnauß, J. (2017) · Springer eBooks · doi:10.1007/978-3-319-65924-4_5 · Cited by 6

Extending the Capabilities of Molecular Force Sensors via DNA Nanotechnology

Beltrán, S. M., Slepian, M. J., & Taylor, R. E. (2020) · Critical Reviews in Biomedical Engineering · doi:10.1615/critrevbiomedeng.2020033450 · Cited by 5

Formation of non-base-pairing DNA microgels using directed phase transition of amphiphilic monomers

Lee, C., Do, S., Lee, J. Y., Kim, M.-J., Kim, S. M., Shin, Y., & Kim, D. (2022) · Nucleic Acids Research · doi:10.1093/nar/gkac232 · Cited by 5

Helical DNA Origami Tubular Structures with Various Sizes and Arrangements

Endo, M., Yamamoto, S., Emura, T., Hidaka, K., Morone, N., Heuser, J. E., & Sugiyama, H. (2014) · Angewandte Chemie · doi:10.1002/ange.201402973 · Cited by 5

Growth Rate and Thermal Properties of DNA Origami Filaments

Stenke, L. J., & Saccà, B. (2022) · Nano Letters · doi:10.1021/acs.nanolett.2c02255 · Cited by 5

Engineering Artificial Machines from Designable DNA Materials for Biomedical Applications

Qi, H., Huang, G., Han, Y., Zhang, X., Li, Y., Pingguan‐Murphy, B., Lu, T. J., Xu, F., & Wang, L. (2014) · Tissue Engineering Part B Reviews · doi:10.1089/ten.teb.2014.0494 · Cited by 5

DNA structures embedded with functionalized nanomaterials for biophysical applications

Tandon, A., & Park, S. H. (2021) · Journal of the Korean Physical Society · doi:10.1007/s40042-020-00053-3 · Cited by 5

Membrane-Spanning Nanopores Formed from Nucleic Acids

Li, Y., Karrasch, T., Keyser, U. F., & Göpfrich, K. (2026) · Chemical Reviews · doi:10.1021/acs.chemrev.5c00905 · Cited by 4

Circular RNA oligonucleotides: enzymatic synthesis and scaffolding for nanoconstruction

Li, S., Chu, Y., Guo, X., Mao, C., & Xiao, S. (2024) · Nanoscale Horizons · doi:10.1039/d4nh00236a · Cited by 4

Designing a Bio-responsive Robot from DNA Origami

Ishay, E. B., Abu-Horowitz, A., & Bachelet, I. (2013) · Journal of Visualized Experiments · doi:10.3791/50268 · Cited by 4

Structural stability and electrical characteristic of DNA lattices doped with lanthanide ions

Dugasani, S. R., Gnapareddy, B., Kim, J. A., Yoo, S., Hwang, T., Kim, T., & Park, S. H. (2017) · Current Applied Physics · doi:10.1016/j.cap.2017.08.001 · Cited by 4

Systematic altering of semiflexible DNA-based polymer networks via tunable crosslinking

Glaser, M., Mollenkopf, P., Praščević, D., Ferraz, C., Käs, J. A., Schnauß, J., & Smith, D. M. (2023) · Nanoscale · doi:10.1039/d2nr05615a · Cited by 4

An Aptamer-Embedded Two-Dimensional DNA Nanoscale Material with the Property of Cells Recruitment

Li, H., Li, R., He, S., Wang, Y., Fang, W., Jin, Y., Yang, R. X., Liu, Y., Ye, Q., & Peng, X. (2023) · Nano Letters · doi:10.1021/acs.nanolett.3c01240 · Cited by 4

DNA nanostructures as biomolecular scaffolds for antigen display

Chen, K., Jiang, M. Z., Liu, J., Huang, D., & Yang, Y. R. (2023) · Wiley Interdisciplinary Reviews Nanomedicine and Nanobiotechnology · doi:10.1002/wnan.1921 · Cited by 4

DNA hybrid florescent chrominance sensor: Drug sensing through direct gradient florescent color transformation of hybrid DNA crystals loaded lanthanide (Eu3+/Tb3+) complexes

Zhao, S., Xiu, D., Zhang, M., Wang, Y., Qiu, M., Snow, C. D., Wang, Y., Belfiore, L. A., & Tang, J. (2024) · Journal of Crystal Growth · doi:10.1016/j.jcrysgro.2024.127582 · Cited by 4

Diverse Chiral Nanotubes Assembled from Identical DNA Strands

Xie, C., Chen, Z., Chen, K., Hu, Y., Xu, F., & Pan, L. (2024) · Nano Letters · doi:10.1021/acs.nanolett.4c02071 · Cited by 4

Spiraling-Based Structural DNA Nanotechnology to Regulate the Orientation of Sticky Ends for Intelligent Assembly of In Vivo Targeting DNA Nanostructures

Huang, H., Chen, X., Xue, C., Yu, X., Hu, S., Luo, M., & Wu, Z. (2025) · Analytical Chemistry · doi:10.1021/acs.analchem.5c03585 · Cited by 4

DNA Tetrominoes: The Construction of DNA Nanostructures Using Self-Organised Heterogeneous Deoxyribonucleic Acids Shapes

Ong, H. S., Rahim, M. S., Firdaus‐Raih, M., & Ramlan, E. I. (2015) · PLoS ONE · doi:10.1371/journal.pone.0134520 · Cited by 5

DNA as a nanomateria

Zvereva, M. I., Malyavko, A. N., & Донцова, О. А. (2012) · Polymer Science Series A · doi:10.1134/s0965545x12040104 · Cited by 4

Deadly DNA

Krishnan, S., & Simmel, F. C. (2014) · Nature Chemistry · doi:10.1038/nchem.2148 · Cited by 4

Efficient 3-SAT algorithms in the tile assembly model

Brun, Y. (2012) · Natural Computing · doi:10.1007/s11047-011-9299-0 · Cited by 4

Self-Assembly-Based Structural DNA Nanotechnology

Zhang, Z., Fu, Y., Li, B., Feng, G., Li, C., Fan, C., & He, L. (2011) · Current Organic Chemistry · doi:10.2174/138527211794474429 · Cited by 4

Isothermal approach to assemble spatial DNA nanotubes for drug delivery

Shi, X., Zhao, H., Li, X., & Song, T. (2018) · Oncotarget · doi:10.18632/oncotarget.23992 · Cited by 4

DNA nanostructures from double-C-shaped motifs with controllable twist and curvature

Yang, D., Huang, K., Wang, P., Mi, Y., & Wei, B. (2019) · Nanoscale · doi:10.1039/c9nr03861b · Cited by 4

DNA origami-based microtubule analogue

Zhang, T. (2020) · Nanotechnology · doi:10.1088/1361-6528/abb395 · Cited by 4

Obtaining Precise Molecular Information via DNA Nanotechnology

Tang, Q., & Han, D. (2021) · Membranes · doi:10.3390/membranes11090683 · Cited by 4

Coverage Control of DNA Crystals Grown by Silica Assistance

Lee, J., Kim, S.-H., Kim, J.-H., Lee, C., Roh, Y., & Park, S. H. (2011) · Angewandte Chemie · doi:10.1002/ange.201103604 · Cited by 4

DNA Origami Nanodevices for Therapeutic Delivery Applications

Halley, P. D., Lucas, C. R., Roki, N., Vantangoli, N. J., Chenoweth, K. P., & Castro, C. E. (2022) · Springer eBooks · doi:10.1007/978-3-030-93333-3_8 · Cited by 4

From Tilings to Fibers – Bio-mathematical Aspects of Fold Plasticity

Lesieur, C., & Vuillo, L. (2014) · InTech eBooks · doi:10.5772/58577 · Cited by 4

Biomimetische DNA‐Nanoröhren: Gezielte Synthese und Anwendung nanoskopischer Kanäle

Liu, X., Zhao, Y., Liu, P., Wang, L., Lin, J., & Fan, C. (2018) · Angewandte Chemie · doi:10.1002/ange.201807779 · Cited by 4

Collective motility of dynein linear arrays built on DNA nanotubes

Ibusuki, R., Shiraga, M., Furuta, A., Yoshio, M., Kojima, H., Oiwa, K., & Furuta, K. (2020) · Biochemical and Biophysical Research Communications · doi:10.1016/j.bbrc.2019.12.125 · Cited by 4

Simple Evolution of Complex Crystal Species

Schulman, R., & Winfree, E. (2011) · Lecture notes in computer science · doi:10.1007/978-3-642-18305-8_14 · Cited by 4

Recent Advances in Prescribing Chiral Plasmonics with DNA Frameworks

Hou, X., Zhang, Y., Shi, J., Wang, L., & Liu, H. (2021) · ChemNanoMat · doi:10.1002/cnma.202100425 · Cited by 4

Microswimmers That Flex: Advancing Microswimmers with Templated Assembly and Responsive DNA Nanostructures

Imamura, T., Bergbreiter, S., & Taylor, R. E. (2025) · Accounts of Materials Research · doi:10.1021/accountsmr.5c00009 · Cited by 3

Construction of DNA-templated nanoparticle assemblies using click DNA ligation

Zhang, H., Fan, Y., & Zhong, H. (2012) · Biosensors and Bioelectronics · doi:10.1016/j.bios.2012.09.026 · Cited by 3

Complex Assemblies of Colloidal Microparticles with Compliant DNA Linkers and Magnetic Actuation

Imamura, T., Chung, N., Sönmez, U. M., Travers, M. J., Bergbreiter, S., & Taylor, R. E. (2024) · Advanced Materials Technologies · doi:10.1002/admt.202401584 · Cited by 3

Programming the Nucleation of DNA Brick Self‐Assembly with a Seeding Strand

Zhang, Y., Reinhardt, A., Wang, P., Song, J., & Ke, Y. (2020) · Angewandte Chemie · doi:10.1002/ange.201915063 · Cited by 5

The RNA Newton polytope and learnability of energy parameters

Forouzmand, E., & Chitsaz, H. (2013) · Bioinformatics · doi:10.1093/bioinformatics/btt226 · Cited by 3

Synthetic Biology in Studying the Origin of Life, Evolution, and Structure-Function Relation

Liu, C., Xiao, M., & ZHANG, B. (2015) · Scientia Sinica Vitae · doi:10.1360/n052015-00046 · Cited by 2

Addressable DNA nanotubes with repetitive components

Bai, T., & Wei, B. (2019) · Nanoscale · doi:10.1039/c9nr07196b · Cited by 3

Supramolecular DNA Nanotechnology

Conway, J. W., & Sleiman, H. F. (2017) · Elsevier eBooks · doi:10.1016/b978-0-12-409547-2.12548-x · Cited by 3

Force-Induced Unravelling of DNA Origami

Engel, M. C. (2019) · Springer theses · doi:10.1007/978-3-030-25413-1_4 · Cited by 3

Designer Structures Assembled from Modular DNA Superbricks

Li, X., Yang, D., Kou, B., Shen, L., Li, H., & Wang, P. (2019) · ACS Applied Bio Materials · doi:10.1021/acsabm.9b01046 · Cited by 3

Construction of Functional DNA Nanostructures for Theranostic Applications

Li, J., Fan, L., Pei, H., Wang, L., Huang, Q., & Fan, C. (2015) · Wiley eBooks · doi:10.1002/9781118998922.ch4 · Cited by 3

Multiple-unit interlocking enhances the single-stranded tiles assembly of DNA nanostructures

Guan, X., Zhu, C., Dong, Y., Liu, D., & Mao, C. (2024) · Nanoscale · doi:10.1039/d4nr03288h · Cited by 2

Chemical Environments Influence DNA Nanostructures: From Fundamental Interactions to Functional Applications

Xie, M., Zhang, C., Liu, L., & Chao, J. (2026) · Chemistry - A European Journal · doi:10.1002/chem.71209 · Cited by 2

Intracellular neuronal recordings across DNA tiles

Xiao, S., Um, S. H., Xu, M., Dankwa, D., Seo, S., Choi, J. H., Aksimentiev, A., Green, L. N., & Jayant, K. (2026) · Nature Nanotechnology · doi:10.1038/s41565-026-02180-7 · Cited by 2

DNA lattice growth with single, double, and triple double-crossover boundaries by stepwise self-assembly

Raza, M. T., Tandon, A., Park, S., Lee, S.-J., Nguyen, T. B. N., Vu, T. H. N., & Park, S. H. (2023) · Nanotechnology · doi:10.1088/1361-6528/acc1ed · Cited by 2

Conformational dynamics and mechanical properties of biomimetic RNA, DNA, and RNA–DNA hybrid nanotubes: an atomistic molecular dynamics study

Torkan, E., & Salmani-Tehrani, M. (2023) · Physical Chemistry Chemical Physics · doi:10.1039/d3cp01028g · Cited by 2

DNA Nanotechnology Out of Equilibrium

Simmel, F. C. (2023) · Natural computing series · doi:10.1007/978-981-19-9891-1_2 · Cited by 2

Tile-Based DNA Nano-assemblies

Rangnekar, A., & LaBean, T. H. (2013) · Nucleic acids and molecular biology · doi:10.1007/978-3-642-38815-6_4 · Cited by 2

DNA Nanotechnology: From Biology and Beyond

Liu, C., & Ellington, A. D. (2013) · Nucleic acids and molecular biology · doi:10.1007/978-3-642-38815-6_6 · Cited by 2

Spectroscopic properties of artificial DNA nanostructures

Amin, R., Kulkarni, A., Lee, J., Lee, C., Park, S. H., & Kim, T. (2011) · Current Applied Physics · doi:10.1016/j.cap.2011.03.003 · Cited by 2

Nanolithography Based on Metalized DNA Templates for Graphene Patterning

Jin, Z., Sun, W., Yin, P., & Strano, M. S. (2014) · Current Protocols in Chemical Biology · doi:10.1002/9780470559277.ch130187 · Cited by 2

Simple evolution of complex crystal species

Schulman, R., & Winfree, E. (2012) · Natural Computing · doi:10.1007/s11047-011-9302-9 · Cited by 2

Construction of Foldback Intercoil DNA Nanostructures and Analysis of Their Vibrational Modes

Son, J., Jo, S., Song, Y., Lee, B. H., Kim, M. K., Kim, B.-D., & Park, S. H. (2018) · The Journal of Physical Chemistry C · doi:10.1021/acs.jpcc.7b12169 · Cited by 2

Fabrication and Characterization of Finite-Size DNA 2D Ring and 3D Buckyball Structures

Jo, S., Kim, S.-J., Lee, B. H., Tandon, A., Kim, B., Park, S. H., & Kim, M. K. (2018) · International Journal of Molecular Sciences · doi:10.3390/ijms19071895 · Cited by 3

Super stable giant tubes with densely packed multilayer ultrathick membranes self-assembled from amphiphilic polyamide

Wang, L., Zhu, Q., Ding, L., & Bai, Y. (2019) · Chemical Communications · doi:10.1039/c9cc08227a · Cited by 2

Self-Assembly of Gamma-Modified Peptide Nucleic Acids into Complex Nanostructures in Organic Solvent Mixtures

Kumar, S., Liu, Y., & Taylor, R. E. (2020) · Journal of Visualized Experiments · doi:10.3791/61351 · Cited by 2

Molecular Computing Machineries — Computing Models and Wet Implementations

Hagiya, M., Kobayashi, S., Komiya, K., Tanaka, F., & Yokomori, T. (2012) · Springer eBooks · doi:10.1007/978-3-540-92910-9_34 · Cited by 2

Multirule-Combined Algorithmic Assembly Demonstrated by DNA Tiles

Lee, S.-J., Park, S., Raza, M. T., Nguyen, T. B. N., Vu, T. H. N., Tandon, A., & Park, S. H. (2022) · ACS Applied Polymer Materials · doi:10.1021/acsapm.2c00528 · Cited by 2

Genotype-phenotype mapping with polyominos made from DNA origami tiles

Dreher, Y., Fichtler, J., Karfusehr, C., Jahnke, K., Yang, X. M., Keller, A., & Göpfrich, K. (2022) · Biophysical Journal · doi:10.1016/j.bpj.2022.09.006 · Cited by 2

Coverage percentage and coverage rate of different DNA nanostructures grown on a mica substrate

Bashar, S., Kim, S.-J., Hwang, S. U., Dugasani, S. R., Ha, T. H., & Park, S. H. (2015) · Current Applied Physics · doi:10.1016/j.cap.2015.07.025 · Cited by 2

REPORTS Programming DNA Tube Circumferences

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Programming the design

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