Programming DNA Tube Circumferences

Design and self-assembly of two-dimensional DNA crystals

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DNA in a material world

Seeman, N. C. (2003) · Nature · doi:10.1038/nature01406 · Cited by 2,792

DNA-Templated Self-Assembly of Protein Arrays and Highly Conductive Nanowires

Yan, H., Park, S. H., Finkelstein, G., Reif, J. H., & LaBean, T. H. (2003) · Science · doi:10.1126/science.1089389 · Cited by 1,765

Programming biomolecular self-assembly pathways

Yin, P., Choi, H. M. T., Calvert, C. R., & Pierce, N. A. (2008) · Nature · doi:10.1038/nature06451 · Cited by 1,616

DNA nanomachines

Bath, J., & Turberfield, A. J. (2007) · Nature Nanotechnology · doi:10.1038/nnano.2007.104 · Cited by 974

DNA double-crossover molecules

Fu, T. J., & Seeman, N. C. (1993) · Biochemistry · doi:10.1021/bi00064a003 · Cited by 831

Rational Design of DNA Nanoarchitectures

Feldkamp, U., & Niemeyer, C. M. (2006) · Angewandte Chemie International Edition · doi:10.1002/anie.200502358 · Cited by 543

Design and Characterization of Programmable DNA Nanotubes

Rothemund, P. W. K., Ekani-Nkodo, A., Papadakis, N., Kumar, A., Fygenson, D. K., & Winfree, E. (2004) · Journal of the American Chemical Society · doi:10.1021/ja044319l · Cited by 512

DNA-nanotube-induced alignment of membrane proteins for NMR structure determination

Douglas, S. M., Chou, J. J., & Shih, W. M. (2007) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0700930104 · Cited by 481

An Overview of Structural DNA Nanotechnology

Seeman, N. C. (2007) · Molecular Biotechnology · doi:10.1007/s12033-007-0059-4 · Cited by 454

DNA self-assembly-based fabrication of metallic nanostructures and related nanophotonics

Yi-Nan, Z., Wang, L., Liu, H., & Chun-Hai, F. (2017) · Acta Physica Sinica · doi:10.7498/aps.66.147101 · Cited by 2

Withdrawn: Cell-Penetrating Peptides Uptake Pathways and Role in Drug Deliverywith Potentials for Gene Therapy and Vaccine DevelopmentPreprint

Dowaidar, M. (2023) · Preprints.org · doi:10.20944/preprints202307.0889.v1 · Cited by 2

Measuring structural parameters of crosslinked and entangled semiflexible polymer networks with single-filament tracing

Händler, T., Tutmarc, C., Glaser, M., Freitag, J. S., Smith, D. M., & Schnauß, J. (2021) · Physical review. E · doi:10.1103/physreve.103.062501 · Cited by 1

RNA Study Using DNA Nanotechnology

Tadakuma, H., Masubuchi, T., & Ueda, T. (2016) · Progress in molecular biology and translational science · doi:10.1016/bs.pmbts.2015.11.004 · Cited by 2

Membrane‐Penetrating Molecular Device Based on a Triplex Containing Acyclic L‐Threoninol Nucleic Acid Functionalized with Cholesterol

Liu, K., Asanuma, H., & Murayama, K. (2025) · Angewandte Chemie International Edition · doi:10.1002/anie.202516095 · Cited by 1

DNA Nano Devices as a Biased Random Walk Process: A Case Study of Isothermal Ratchet?

Aimé, J., & Elezgaray, J. (2015) · Materials Sciences and Applications · doi:10.4236/msa.2015.65045 · Cited by 1

Assembling CdSe/ZnS core–shell quantum dots on localized DNA nanostructures

Lee, J., Lee, J., Yeon, S. M., Min, S., Kim, J., Choi, H., Kim, S.-H., Koo, J., Kim, K., Park, S. H., et al. (2014) · RSC Advances · doi:10.1039/c4ra04382k · Cited by 1

Synthesis and self-assembly of a DNA-conjugated poly(propylene glycol) derivative

Um, S. H. (2012) · Biotechnology and Bioprocess Engineering · doi:10.1007/s12257-012-0419-1 · Cited by 1

Theoretical investigation of self-assembled peptide nanostructures for biotechnological and biomedical applications

Díaz, C., & Andrea, J. (2011) · Cited by 1

Recent progress in DNA origami

Shi, D., Ding, B., ZhenGang, W. A. N. G., & Xu, J. (2013) · Chinese Science Bulletin (Chinese Version) · doi:10.1360/972012-1626 · Cited by 1

Hey hey hey hey, it was the DNA

Williams, M. A. K. (2016) · New Journal of Physics · doi:10.1088/1367-2630/18/5/051002 · Cited by 1

Introduction: Overview of DNA Origami as Biomaterials and Application

Yang, Y. (2015) · Springer theses · doi:10.1007/978-4-431-55769-2_1 · Cited by 1

Complex DNA Brick Assembly

Ong, L. L., & Ke, Y. (2016) · Methods in molecular biology · doi:10.1007/978-1-4939-6454-3_4 · Cited by 1

Magnetic studies of Co2+, Ni2+, and Zn2+−modified DNA double−crossover lattices

Dugasani, S. R., Oh, Y. H., Gnapareddy, B., Park, T., Kang, W. N., & Park, S. H. (2017) · Applied Surface Science · doi:10.1016/j.apsusc.2017.08.069 · Cited by 1

Nucleic Acid Nanotechnology

Chandrasekaran, A. R. (2018) · Elsevier eBooks · doi:10.1016/b978-0-12-803581-8.10435-7 · Cited by 1

Non-equilibrium Bio-Molecular Unfolding Under Tension

Engel, M. C. (2019) · Springer theses · doi:10.1007/978-3-030-25413-1_3 · Cited by 1

Constraint Release for Reptating Filaments in Semiflexible Networks Depends on Background Fluctuations

Händler, T., Tutmarc, C., Freitag, J. S., Smith, D. M., & Schnauß, J. (2022) · Polymers · doi:10.3390/polym14040707 · Cited by 1

Demonstration of Big Bang-like patterns through logic-implemented DNA algorithmic assembly

Park, S., & Park, S. H. (2022) · AIP Advances · doi:10.1063/5.0093198 · Cited by 1

Molecular Nanotechnology for Molecular Robots

Endo, M. (2022) · Springer eBooks · doi:10.1007/978-981-19-3987-7_4 · Cited by 1

Seeded growth of adaptive tiles on DNA origami

Liu, Y., Cheng, J. Q., Wang, Y., Ji, B., Tang, L., Zou, K., Xie, Y., Cui, D., Ke, Y., & Song, J. (2022) · Cell Reports Physical Science · doi:10.1016/j.xcrp.2022.101040 · Cited by 1

Supramolecular Polymerization of DNA Double-Crossover-Like Motifs in Various Dimensions

Zhang, C., Mao, D., Paluzzi, V. E., & Mao, C. (2023) · Chinese Journal of Polymer Science · doi:10.1007/s10118-023-2998-z · Cited by 1

A General Design Method for Scaffold-Free DNA Wireframe Nanostructures

Elonen, A., Mohammed, A., & Orponen, P. (2024) · Lecture notes in computer science · doi:10.1007/978-3-031-63742-1_13 · Cited by 1

Formalization of Side-Aware DNA Origami Words and Their Rewriting System, and Equivalent Classes

Cho, D.-J. (2025) · Mathematics · doi:10.3390/math13060895 · Cited by 1

Multiscale model for the pretension-dependent bending properties of DNA nanotube

Liu, H.-L., Zhang, N.-H., Zhang, C., & Lu, W. (2025) · Physical review. E · doi:10.1103/7zc8-4kw7 · Cited by 1

Engineering Synthetic Myosin Filaments Using DNA Nanotubes

Sommese, R. F., & Sivaramakrishnan, S. (2018) · Methods in molecular biology · doi:10.1007/978-1-4939-8556-2_5 · Cited by 1

Chiral plasmonic nanostructures via DNA self-assembly

Wang, M., Dong, J., & Wang, Q. (2018) · Chinese Science Bulletin (Chinese Version) · doi:10.1360/n972018-00888 · Cited by 1

Research on DNA Nanostructures Based on the Hybrid Chain Reaction for the Assignment Problem

Wang, R., Yin, Z., Yang, J., Yang, X., & Tang, Z. (2021) · Journal of Mathematics · doi:10.1155/2021/5570737 · Cited by 1

DNA Nanostructures

Connolly, A. R., Seow, N., Fenati, R. A., & Ellis, A. V. (2018) · Elsevier eBooks · doi:10.1016/b978-0-12-803581-8.10445-x · Cited by 1

Smart Biomaterials and Biosensors: Intelligent Properties of Biomolecules and Cells in Hybrid Devices

Marx, K. A. (2010) · Wiley eBooks · doi:10.1002/9780470054581.eib645 · Cited by 1

Prediction of RNA-RNA interaction structure by centroids in the Boltzmann ensemblePreprint

Chitsaz, H. (2010) · arXiv (Cornell University) · doi:10.48550/arxiv.1002.1736 · Cited by 1

Analogies between structural and systems biology and systems-of-systems engineering in dynamic environments

Moitra, S., Yanamala, N. V. K., Taştan, Ö., Singh, I., LANGMEAD, C. J., & Klein‐Seetharaman, J. (2010) · International Conference on System of Systems Engineering · doi:10.1109/sysose.2010.5544104 · Cited by 1

DNA Origami Nanorobots

Bachelet, I. (2014) · Encyclopedia of Molecular Cell Biology and Molecular Medicine · doi:10.1002/3527600906.mcb.20130072 · Cited by 1

The right shoe for the job

Gandavadi, D., & Hariadi, R. F. (2022) · Science · doi:10.1126/science.abn9659 · Cited by 1

Nucleotides and Nucleic Acids; Oligo- and Polynucleotides

Loakes, D. (2010) · Royal Society of Chemistry eBooks · doi:10.1039/9781849730839-00144 · Cited by 1

Synthesis Of Dna-Templated Functional Materials And Their Applications

Lee, J. B. (2009) · eCommons (Cornell University)

Self‐Assembly of Nucleic Acids

Carneiro, K. M. M., Lo, P. K., & Sleiman, H. F. (2012) · Supramolecular chemistry · doi:10.1002/9780470661345.smc086

Molecular Engineering to Enhance Aptamer Functionality

Han, D., Wu, C. S., & Tan, W. (2015) · Springer eBooks · doi:10.1007/978-3-662-46226-3_5

Gel electrophoretic mobility evaluation of a necklace-like DNA nanostructure

Um, S. H. (2013) · Biotechnology and Bioprocess Engineering · doi:10.1007/s12257-012-0472-9

Exact Learning of RNA Energy Parameters from Structure

Chitsaz, H., & Aminisharifabad, M. (2014) · Lecture notes in computer science · doi:10.1007/978-3-319-05269-4_5

Programming the design

Vaughan, O. P. H. (2008) · Nature Nanotechnology · doi:10.1038/nnano.2008.264

Experimental Implementation of Tile Assembly

Evans, C. G. (2016) · Encyclopedia of Algorithms · doi:10.1007/978-1-4939-2864-4_674

DNA Nanotechnology as Reference for RNA Nanotechnology

Wang, Z.-G., & Ding, B. (2013) · CRC Press eBooks · doi:10.1201/b15152-26

Supramolecular Chemistry with DNA

Chidchob, P., & Sleiman, H. F. (2016) · doi:10.1002/9781119053859.ch2

A Nucleotide-Level Computational Approach to DNA-Based Materials

Romano, F., & Rovigatti, L. (2017) · Springer eBooks · doi:10.1007/978-3-319-71578-0_3

Design and analysis of wireframe DNA nanostructures

Benson, E. (2018) · Figshare

Exact Learning of RNA Energy Parameters From StructurePreprint

Chitsaz, H., & Aminisharifabad, M. (2013) · arXiv (Cornell University) · doi:10.48550/arxiv.1310.4223

The RNA Newton Polytope and Learnability of Energy ParametersPreprint

Forouzmand, E., & Chitsaz, H. (2013) · arXiv (Cornell University) · doi:10.48550/arxiv.1301.1608

NANOSCALE PATTERNING WITH DNA NANOSTRUCTURES

Kim, H. J. (2018) · D-Scholarship@Pitt (University of Pittsburgh)

DNA as a Nanoscale Building Material

Demidov, V. V. (2020) · Springer eBooks · doi:10.1007/978-3-030-36434-2_3

Operation of Queue and Stack by DNA Tiles

Zhang, X., Zhao, N., & Yang, J. (2020) · E3S Web of Conferences · doi:10.1051/e3sconf/202021803051

Regulation of 2D DNA Nanostructures by the Coupling of Tile Cur-Vatures and Arm TwistsPreprint

Jiang, C., Lu, B., Zhang, W., Ohayon, Y. P., Ni, C., Feng, F., Seeman, N. C., & Xiao, S. (2021) · ChemRxiv · doi:10.26434/chemrxiv.14755005.v1

DNA Switching Circuits Based on Binary Tree

Chen, Z., Yin, Z., Cui, J., Yang, J., & Tang, Z. (2021) · IEEE Access · doi:10.1109/access.2021.3091010

DNA Strand Displacement Computing Model for the SAT Problem

Yang, J., Pang, X., Tang, Z., Yang, X., & Liu, C. (2021) · Journal of Physics Conference Series · doi:10.1088/1742-6596/2026/1/012040

DNA Nanotechnology as Reference for RNA Nanotechnology

Wang, Z., & Ding, B. (2013) · CRC Press eBooks · doi:10.1201/b15152-23

Regulation of 2D DNA Nanostructures by the Coupling of Tile Curvatures and Arm TwistsPreprint

Jiang, C., Lu, B., Zhang, W., Ohayon, Y. P., Ni, C., Feng, F., Seeman, N. C., & Xiao, S. (2021) · ChemRxiv · doi:10.26434/chemrxiv.14755005.v2

Regulation of 2D DNA Nanostructures by the Coupling of Tile Curvatures and Arm TwistsPreprint

Jiang, C., Lu, B., Zhang, W., Ohayon, Y. P., Ni, C., Feng, F., Seeman, N. C., & Xiao, S. (2021) · ChemRxiv · doi:10.26434/chemrxiv.14755005

DNA nanotubes with programmable circumferences, structures from ice moulds, the strongest material ever measured, explosive gold nanoparticles, and more

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DNA-Directed Assembly of Multicomponent Single-Walled Carbon Nanotube Devices

Han, S., & William, I. I. I. (2012) · The electrical engineering handbook/Electrical engineering handbook series/Electrical engineering handbook · doi:10.1201/b11930-38

Advancement of Computer‐Aided Design Software and Simulation Tools for Nucleic Acid Nanostructures and DNA Origami

Kawamata, I. (2022) · Wiley eBooks · doi:10.1002/9781119682561.ch4

Multi-Domains in a Single Lattice Formed by DNA Self-Assembly

Jo, S., Lee, S.-J., Park, S., Tandon, A., Nguyen, T. B. N., Vu, T. H. N., Raza, M. T., & Park, S. H. (2022) · ACS Omega · doi:10.1021/acsomega.2c02556

Experimental Implementation of Tile Assembly

Evans, C. G. (2015) · Encyclopedia of Algorithms · doi:10.1007/978-3-642-27848-8_674-1

Deciphering plausible role of DNA nanostructures in drug delivery

Singh, A., Khan, S., Nain, N., & Kukreti, S. (2023) · Elsevier eBooks · doi:10.1016/b978-0-323-96117-2.00011-x

Programmable Nanomachines That Move on DNA Nanotube Tracks

Ibusuki, R., & Furuta, K. (2023) · Seibutsu Butsuri · doi:10.2142/biophys.63.79

Reminiscences from the Trenches: The Early Years of DNA Nanotech

LaBean, T. H. (2023) · Natural computing series · doi:10.1007/978-981-19-9891-1_5

Flexibility Analysis of DNA Nanotubes with Prescribed Circumferences and Their Pearl-Necklace Assemblies with Gold Nanoclusters

Chen, C., Zeng, Y., Gao, G., Sun, T., & Shen, L. (2023) · Langmuir · doi:10.1021/acs.langmuir.3c01042

Minimalist Design of Wireframe DNA Nanotubes: Tunable Geometry, Size, Chirality, and Dynamics

Luo, X., Saliba, D., Yang, T. P., Gentile, S., Mori, K., Islas, P., Das, T., Bagheri, N., Porchetta, A., Guarné, A., et al. (2023) · Angewandte Chemie · doi:10.1002/ange.202309869

Leak-resilient enzyme-free nucleic acid dynamical systems through shadow cancellation

Nagipogu, R. T., & Reif, J. H. (2024) · Journal of The Royal Society Interface · doi:10.1098/rsif.2024.0053

Overview of DNA Nanotechnology: Types, Principles, Design, and Applications

Mohamed, H. R. (2024) · Recent Research in Genetics and Genomics/Recent Research in Genetics and Genomics · doi:10.21608/rrgg.2024.369515

Physical Properties of Single Cells and Their Collective Behaviors

Blauth, E., Kubitschke, H., Käs, J. A., & Schnauß, J. (2024) · Springer eBooks · doi:10.1007/978-3-031-61846-8_5

Engineering Synthetic Myosin Filaments Using DNA Nanotubes

Debrunner, I. S., Sommese, R. F., & Sivaramakrishnan, S. (2024) · Methods in molecular biology · doi:10.1007/978-1-0716-4280-1_8

Wireframe DNA Origami Capable of Vertex‐protruding Transformation

Ochi, Y., Kato, W., Tsutsui, Y., Gomibuchi, Y., Tominaga, D., Sakai, K., Araki, T., Yoshitake, S., Yasunaga, T., Morimoto, Y. V., et al. (2025) · ChemBioChem · doi:10.1002/cbic.202401071

Tuning the Inter‐Layer Angle and Curvature of Double‐Layered Tiles Hinged by Layered Crossovers for Construction of DNA Lattices and Tubes

Feng, F., Zhang, L., & Xiao, S. (2025) · Small Methods · doi:10.1002/smtd.202401649

Growing Point Automata

Hagiya, M. (2025) · Emergence, complexity and computation · doi:10.1007/978-3-031-81097-8_2

3659 DNA nanotechnology for drug delivery

Navarro, N., Fàbrega, C., & Eritja, R. (2025) · De Gruyter eBooks · doi:10.1515/9783111425085-009

Functional synthetic DNAs for cancer theranostics

Zhang, Y. L., & Zhu, G. (2025) · Elsevier eBooks · doi:10.1016/b978-0-443-22253-5.00006-6

Construction of a DNA cross-linked upconversion nanoprobe for the sensitive detection of ARGs in environmental samples

Li, M., Zhang, Y., Zhang, Y., Shi, X., Ge, C., Sun, Y., Sun, Z., Zhang, S., & Song, X. (2025) · Microchemical Journal · doi:10.1016/j.microc.2025.115831

Membrane‐Penetrating Molecular Device Based on a Triplex Containing Acyclic L‐Threoninol Nucleic Acid Functionalized with Cholesterol

Liu, K., Asanuma, H., & Murayama, K. (2025) · Angewandte Chemie · doi:10.1002/ange.202516095

Application of Self-Assembled DNA Nanomaterials in Tumor Diagnosis and Treatment

Sun, S. J. (2026) · Springer eBooks · doi:10.1007/978-981-96-9478-5_1

Nucleic Acid Nanodevices for siRNA Delivery

Sun, M., Ding, Y., & Chao, J. (2026) · ACS Nano Medicine · doi:10.1021/acsnanomed.5c00196 · Cited by 1

Dynamic DNA origamis as isothermal supramolecular machines : melting dynamics, photocontrol and isothermal folding

Rossi‐Gendron, C. (2018) · theses.fr (ABES) · doi:10.70675/23428472z11adz4563zbccfzb05d6dc37100

Nanostructures et origamis d'ADN évolutifs : suprapliage, auto-assemblage isotherme et reconfigurabilité géante

Fakih, F. E. (2022) · theses.fr (ABES) · doi:10.70675/91fea63ezf9fcz46caz98c4z5c5a72f091de

Controlling DNA Origami Co-folding

Hazard, O. (2025) · doi:10.70675/ffe5e37ez0a04z47e2z9a57zcf452588b4f4

Structural DNA Nanotechnology-Based Branch-Sprouted Biomimetic Nanobamboo for Efficient Isolation of Rare Circulating Tumor Cells

Gao, Q., Wang, W., Yang, Z., Lin, M., Chen, Y., He, T., Li, J., & Wu, Z. (2026) · Analytical Chemistry · doi:10.1021/acs.analchem.6c00349

Structural programming of inorganic materials using DNA frameworks

Yu, F., Li, B., Jia, S., Liu, X., & Lin, Y. (2026) · Chemical Communications · doi:10.1039/d6cc03219b

Crisscross DNA Nanotube Growth with Seed-Programmed Diameter and Nucleation-Directed Pathways

Liu, Y., & Deng, J. (2026) · Journal of the American Chemical Society · doi:10.1021/jacs.6c10518

REPORTS Programming DNA Tube Circumferences

Yin, P., Hariadi, R. F., Sahu, S., Choi, H. M. T., Park, S. H., LaBean, T. H., & Reif, J. H. (2009)

Programming the design

Vaughan, O. P. H. (2008) · Nature Nanotechnology · doi:10.1038/nnano.2008.264

Programming DNA Tube Circumference by Tile Offset Connection

Zhang, Y., Chen, X., Kang, G., Peng, R., Pan, V., Sundaresan, R., Wang, P., & Ke, Y. (2019) · Journal of the American Chemical Society · doi:10.1021/jacs.9b08921 · Cited by 23

Design and Characterization of Programmable DNA Nanotubes

Rothemund, P. W. K., Ekani-Nkodo, A., Papadakis, N., Kumar, A., Fygenson, D. K., & Winfree, E. (2004) · Journal of the American Chemical Society · doi:10.1021/ja044319l · Cited by 512

Large Chiral Nanotubes Self-Assembled by DNA Bricks

Sun, S., Yang, Y., Li, D., & Zhu, J. S. (2019) · Journal of the American Chemical Society · doi:10.1021/jacs.9b08737 · Cited by 31