Cited by 248

The DOI matches its Crossref record; 8 of the 8 references it cites were found in a registry or an index.

Sequencing Y Chromosomes Resolves Discrepancy in Time to Common Ancestor of Males Versus Females

Poznik, G. David, Henn, Brenna M., Yee, Muh-Ching, Sliwerska, Elzbieta, Euskirchen, Ghia M., Lin, Alice A., Snyder, Michael, Quintana-Murci, Lluis, Kidd, Jeffrey M., Underhill, Peter A., Bustamante, Carlos D.·2013·Science

Abstract

Examining Y: The evolution of human populations has long been studied with unique sequences from the nonrecombining, male-specific Y chromosome (see the Perspective by Cann ). Poznik et al. (p. 562 ) examined 9.9 Mb of the Y chromosome from 69 men from nine globally divergent populations—identifying population and individual specific sequence variants that elucidate the evolution of the Y chromosome. Sequencing of maternally inherited mitochondrial DNA allowed comparison between the relative rates of evolution, which suggested that the coalescence, or origin, of the human Y chromosome and mitochondria both occurred approximately 120 thousand years ago. Francalacci et al. (p. 565 ) investigated the sequence divergence of 1204 Y chromosomes that were sampled within the isolated and genetically informative Sardinian population. The sequence analyses, along with archaeological records, were used to calibrate and increase the resolution of the human phylogenetic tree.

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Crossref · 10.1126/science.1237619

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  • The Y-chromosome haplogroup of Anzick-1 is Q-L54*(xM3).

    “We determined the Y-chromosome haplogroup to be Q-L54*(xM3) and, along with 15 previously analysed Y-chromosome sequences20, we constructed a tree to illustrate the phylogenetic context within haplogroup Q (SI13, Extended Data Figure 2).”

    From The genome of a Late Pleistocene human from a Clovis burial site in western Montana (2014) · cites this paper as [20]

    The paper’s Abstract identifies Q-L54*(xM3) in a Mayan individual, not in Anzick-1. A search for Anzick-1 found no passage assigning him a Y-chromosome haplogroup. In the citing sentence, the citation follows the reference to previously analysed Y-chromosome sequences, while the haplogroup determination is presented as the citing authors’ own result. (LLM, conf=0.78)

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Research works printed but not linked: 39

  1. 10.1093/oxfordjournals.molbev.a026091 · DOI
  2. 10.1073/pnas.97.13.7360 · DOI
  3. 10.1093/genetics/161.1.447 · DOI
  4. 10.1038/378376a0 · DOI
  5. 10.1016/j.ajhg.2011.05.002 · DOI
  6. 10.1038/35047064 · DOI
  7. 10.1146/annurev.genet.41.110306.130407 · DOI
  8. 10.1038/nrg1124 · DOI
  9. 10.1038/nature01722 · DOI
  10. 10.1046/j.1469-1809.2001.6510043.x · DOI
  11. 10.1101/gr.143198.112 · DOI
  12. 10.1126/science.1153717 · DOI
  13. 10.1101/gr.7172008 · DOI
  14. 10.1038/nature08700 · DOI
  15. 10.1098/rstb.1994.0079 · DOI
  16. 10.1126/science.1153569 · DOI · Paper page
  17. 10.1016/j.cub.2009.07.032 · DOI
  18. 10.1002/evan.20181 · DOI
  19. 10.1186/1471-2148-11-293 · DOI
  20. 10.1093/molbev/msi145 · DOI
  21. 10.1093/molbev/msn244 · DOI
  22. 10.1093/bioinformatics/btp324 · DOI · Paper page
  23. 10.1101/gr.107524.110 · DOI · Paper page
  24. 10.1038/ng.806 · DOI
  25. 10.1093/molbev/msr121 · DOI
  26. 10.1002/humu.21382 · DOI
  27. 10.1016/j.ajhg.2012.03.002 · DOI
  28. 10.1093/nar/gkh340 · DOI · Paper page
  29. 10.1287/mnsc.21.11.1338 · DOI
  30. J. F. C. Kingman in Exchangeability in Probability and Statistics G. Koch F. Spizzichino Eds. (North-Holland Amsterdam 1982) pp. 97–112.
  31. 10.1093/molbev/msq312 · DOI
  32. 10.1038/ejhg.2012.86 · DOI
  33. 10.1073/pnas.0910803106 · DOI
  34. 10.1093/nar/gkj144 · DOI · Paper page
  35. 10.1126/science.1156533 · DOI · Paper page
  36. 10.1371/journal.pone.0000829 · DOI · Paper page
  37. 10.1016/j.ajhg.2013.02.002 · DOI
  38. 10.1093/molbev/msh186 · DOI
  39. 10.1093/bioinformatics/btp033 · DOI

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Metadata

Authors
Poznik, G. D., Henn, B. M., Yee, M.-C., Sliwerska, E., Euskirchen, G. M., Lin, A. A., Snyder, M., Quintana-Murci, L., Kidd, J. M., Underhill, P. A., & Bustamante, C. D.
Venue
Science
Published
2013-08-02
Volume
341
Issue
6145
Pages
562-565
ISSN
  • 0036-8075
  • 1095-9203
Cited by
248
References
8
Language
en

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