Genomic exploration of the diversity, ecology, and evolution of the archaeal domain of life

Spang, Anja, Caceres, Eva F., Ettema, Thijs J. G.·2017·Science

Cited by (357)

Items 101–200 of 357

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  2. Methanogenesis in animals with foregut and hindgut fermentation: a review
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  3. Helarchaeota and co-occurring sulfate-reducing bacteria in subseafloor sediments from the Costa Rica Margin
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  4. Ancestral archaea expanded the genetic code with pyrrolysine
    Litao Guo, Kazuaki Amikura, Han-Kai Jiang, Takahito Mukai, Xian Fu, Yane‐Shih Wang, Patrick O’Donoghue, Dieter G. Söll, Jeffery M. Tharp · 2022 · Journal of Biological Chemistry
  5. Structure, function and resilience to desiccation of methanogenic microbial communities in temporarily inundated soils of the Amazon rainforest (Cunia Reserve, Rondonia)
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  7. Evidence for non‐methanogenic metabolisms in globally distributed archaeal clades basal to the Methanomassiliicoccales
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  9. A Twist to the Kirby-Bauer Disk Diffusion Susceptibility Test: an Accessible Laboratory Experiment Comparing Haloferax volcanii and Escherichia coli Antibiotic Susceptibility to Highlight the Unique Cell Biology of Archaea
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  10. The inhibitory effect of thiosulfinate on volatile fatty acid and hydrogen production from anaerobic co-fermentation of food waste and waste activated sludge
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  11. On the origin of the nucleus: a hypothesis
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  13. Methanogenesis on Early Stages of Life: Ancient but Not Primordial
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  14. Emerging views of genome organization in Archaea
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  15. The Ribbon-Helix-Helix Domain Protein CdrS Regulates the Tubulin Homolog ftsZ2 To Control Cell Division in Archaea
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  16. CRISPR-Cas9 Toolkit for Genome Editing in an Autotrophic CO 2 -Fixing Methanogenic Archaeon
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  18. Did Cyclic Metaphosphates Have a Role in the Origin of Life?
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  19. Towards enriching and isolation of uncultivated archaea from marine sediments using a refined combination of conventional microbial cultivation methods
    Haining Hu, Vengadesh Perumal Natarajan, Fengping Wang · 2021 · Marine Life Science & Technology
  20. Microbial diversity and community structure in deep-sea sediments of South Indian Ocean
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  22. Archaeal Communities: The Microbial Phylogenomic Frontier
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  23. Metagenomic Insights into the Metabolic and Ecological Functions of Abundant Deep-Sea Hydrothermal Vent DPANN Archaea
    Ruining Cai, Jing Zhang, Rui Liu, Chaomin Sun · 2021 · Applied and Environmental Microbiology
  24. Archaeal lipolytic enzymes: Current developments and further prospects
    Gautam Kumar Meghwanshi, Swati Verma, Vaibhav Srivastava, Rajender Kumar · 2022 · Biotechnology Advances
  25. Both kinds of RNase P in all domains of life: surprises galore
    Charles J. Daniels, Lien B. Lai, Tien‐Hao Chen, Venkat Gopalan · 2018 · RNA
  26. Phylogenomic analyses indicate the archaeal superphylum DPANN originated from free-living euryarchaeal-like ancestors
    Brittany A. Baker, Charley G. P. McCarthy, Purificación López‐García, Romain B Leroy, Edward Susko, Andrew J. Roger, Laura Eme, David Moreira · 2025 · Nature Microbiology
  27. Systems biology of eukaryotic superorganisms and the holobiont concept
    U. Kutschera · 2018 · Theory in Biosciences
  28. Prokaryotic Hydrocarbon Degraders
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  29. Methylotrophic methanogenesis in the Archaeoglobi revealed by cultivation of Ca. Methanoglobus hypatiae from a Yellowstone hot spring
    Mackenzie M. Lynes, Zackary J. Jay, Anthony J. Kohtz, Roland Hatzenpichler · 2024 · The ISME Journal
  30. Dynamics and ecological distributions of the Archaea microbiome from inland saline lakes (Monegros Desert, Spain)
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  31. Archaea: A Gold Mine for Topoisomerase Diversity
    Florence Garnier, Mohea Couturier, Hélène Debat, Marc Nadal · 2021 · Frontiers in Microbiology
  32. Editorial: The Responses of Marine Microorganisms, Communities and Ecofunctions to Environmental Gradients
    Hongyue Dang, Martin Gunter Klotz, Charles R. Lovell, Stefan M. Sievert · 2019 · Frontiers in Microbiology
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    Chao Di Chang, En Hu, Xiaofeng Tang, Sisi Ye, Dan Yang Zhao, Zhi Qu, Ming Li · 2025 · Environment International
  34. A Deep Hidden Diversity of Dictyostelia
    Sandra L. Baldauf, María Romeralo, Omar Fiz-Palacios, Nahid Heidari · 2018 · Protist
  35. Design of targeted primers based on 16S rRNA sequences in meta-transcriptomic datasets and identification of a novel taxonomic group in the Asgard archaea
    Ruyi Zhang, Bin Zou, Yongwei Yan, Che Ok Jeon, Meng Li, Mingwei Cai, Zhe‐Xue Quan · 2020 · BMC Microbiology
  36. Evolving Perspective on the Origin and Diversification of Cellular Life and the Virosphere
    Anja Spang, Tara Mahendrarajah, Pierre Offre, Courtney W. Stairs · 2022 · Genome Biology and Evolution
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  38. Temperature-Dependent Network Modules of Soil Methanogenic Bacterial and Archaeal Communities
    Pengfei Liu, Melanie Klose, Ralf Conrad · 2019 · Frontiers in Microbiology
  39. Evolutionary considerations of the oligosaccharyltransferase AglB and other aspects of N-glycosylation across Archaea
    Sophia Nikolayev, Chen Cohen-Rosenzweig, Jerry Eichler · 2020 · Molecular Phylogenetics and Evolution
  40. Effect of Carbon Sources in Carotenoid Production from Haloarcula sp. M1, Halolamina sp. M3 and Halorubrum sp. M5, Halophilic Archaea Isolated from Sonora Saltern, Mexico
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  41. Comparative Genomics Provides Insights into the Genetic Diversity and Evolution of the DPANN Superphylum
    Liangzhi Li, Zhenghua Liu, Zhicheng Zhou, Min Zhang, Delong Meng, Xueduan Liu, Ye Huang, Xiu-Tong Li, Zhen Jiang, Shuiping Zhong et al. · 2021 · mSystems
  42. Organohalide respiration potential in marine sediments from Aarhus Bay
    Chen Zhang, Siavash Atashgahi, Tom N. P. Bosma, Peng Peng, Hauke Smidt · 2022 · FEMS Microbiology Ecology
  43. Biomethane production from sugar beet pulp under cocultivation with Clostridium cellulovorans and methanogens
    Hisao Tomita, Fumiyoshi Okazaki, Yutaka Tamaru · 2019 · AMB Express
  44. Subsurface and surface halophile communities of the chaotropic Salar de Uyuni
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  45. The Role of Gene Duplication in the Divergence of Enzyme Function: A Comparative Approach
    Alejandro Álvarez-Lugo, Arturo Becerra · 2021 · Frontiers in Genetics
  46. Revisiting Microbial Diversity in Hypersaline Microbial Mats from Guerrero Negro for a Better Understanding of Methanogenic Archaeal Communities
    José Q. García‐Maldonado, Hever Latisnere‐Barragán, Alejandra Escobar‐Zepeda, Santiago Cadena, Patricia J. Ramírez‐Arenas, Ricardo Vázquez‐Juárez, Maurilia Rojas-Contreras, Alejandro López‐Cortés · 2023 · Microorganisms
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  48. Unveiling the life of archaea in sediments: Diversity, metabolic potentials, and ecological roles
    Dayu Zou, Yan-Ling Qi, Jinjie Zhou, Yang Liu, Meng Li · 2025 · iMetaOmics.
  49. Discovery of the Streamlined Haloarchaeon Halorutilus salinus , Comprising a New Order Widespread in Hypersaline Environments across the World
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  50. Archaeal community variation in the Qinhuangdao coastal aquaculture zone revealed by high-throughput sequencing
    Shuping Wang, Xin Zheng, Huijuan Xia, Di Shi, Juntao Fan, Pengyuan Wang, Zhenguang Yan · 2019 · PLoS ONE
  51. Culexarchaeia, a novel archaeal class of anaerobic generalists inhabiting geothermal environments
    Anthony J. Kohtz, Zackary J. Jay, Mackenzie M. Lynes, Viola Krukenberg, Roland Hatzenpichler · 2022 · ISME Communications
  52. The newly proposed TACK and DPANN archaea detected in the production waters from a high-temperature petroleum reservoir
    Lei Zhou, Zhichao Zhou, Yu-Wei Lu, Lei Ma, Yang Bai, Xiao-Xiao Li, Serge Maurice Mbadinga, Yi-Fan Liu, Xin-Chen Yao, Yi-Jie Qiao et al. · 2019 · International Biodeterioration & Biodegradation
  53. Metabolic Potential of As-yet-uncultured Archaeal Lineages of Candidatus Hydrothermarchaeota Thriving in Deep-sea Metal Sulfide Deposits
    Shingo Kato, Shinsaku Nakano, Mariko Kouduka, Miho Hirai, Katsuhiko Suzuki, Takashi Itoh, Moriya Ohkuma, Yohey Suzuki · 2019 · Microbes and Environments
  54. Asgard archaea are diverse, ubiquitous, and transcriptionally active microbes
    Mingwei Cai, Yang Liu, Zhichao Zhou, Yuchun Yang, Jie Pan, Ji‐Dong Gu, Meng Li · 2018 · bioRxiv (Cold Spring Harbor Laboratory)
  55. Unique biogeochemical characteristics in coastal ghost forests – The transition from freshwater forested wetland to salt marsh under the influences of sea level rise
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  58. The expanding Asgard archaea invoke novel insights into Tree of Life and eukaryogenesis
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  59. Isoprenoidal GDGTs and GDDs associated with anoxic lacustrine environments
    Danica Mitrović, Ellen C. Hopmans, Nicole J. Bale, Nora Richter, Linda Amaral‐Zettler, Allix Jean Baxter, Francien Peterse, Pedro M. Raposeiro, Vítor Gonçalves, Ana Cristina Costa et al. · 2023 · Organic Geochemistry
  60. The Tree of Life
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  61. Microbial taxonomic diversity and functional genes mirror soil ecosystem multifunctionality in nonferrous metal mining areas
    Mengyao Zheng, Xiao-Jun Qi, Zhiyue Liu, Yiting Wang, Yanbo Ren, Yuan Li, Yue Zhang, Baofeng Chai, Tong Jia · 2025 · Journal of Hazardous Materials
  62. Distinct assembly processes and environmental adaptation of abundant and rare archaea in Arctic marine sediments
    Jianxing Sun, Aoqi Zhang, Zhongxian Zhang, Yang Liu, Hongbo Zhou, Haina Cheng, Zhu Chen, Hai Li, Ran Zhang, Yuguang Wang · 2023 · Marine Environmental Research
  63. An improved CRISPR and CRISPR interference (CRISPRi) toolkit for engineering the model methanogenic archaeon Methanococcus maripaludis
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  64. Conexivisphaera calida gen. nov., sp. nov., a thermophilic sulfur- and iron-reducing archaeon, and proposal of Conexivisphaeraceae fam. nov., Conexivisphaerales ord. nov., and Conexivisphaeria class. nov. in the phylum Thaumarchaeota
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  69. Comparative genomics reveals electron transfer and syntrophic mechanisms differentiating methanotrophic and methanogenic archaea
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  73. Genomic Insights into the Ecological Role and Evolution of a Novel Thermoplasmata Order, “ Candidatus Sysuiplasmatales”
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  74. Chromosomal domain formation by archaeal SMC, a roadblock protein, and DNA structure
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  77. Mutations Affecting HVO_1357 or HVO_2248 Cause Hypermotility in Haloferax volcanii, Suggesting Roles in Motility Regulation
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  79. Degradation of organic matter
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  80. Exploring tRNA gene cluster in archaea
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  81. A robust genetic toolbox for fine-tuning gene expression in the CO2-Fixing methanogenic archaeon Methanococcus maripaludis
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  83. Form and function of archaeal genomes
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  86. Different Flooding Conditions Affected Microbial Diversity in Riparian Zone of Huihe Wetland
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  90. What Do the DPANN Archaea and the CPR Bacteria Tell Us about the Last Universal Common Ancestors?
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  94. Earth's most needed uncultivated aquatic prokaryotes.
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  97. Environmental microbiology and metagenomics: the Brave New World is here, what's next?
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  98. Archaea – An Introduction
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  99. Phosphorylation of the α subunit inhibits proteasome assembly and regulates cell division in an archaeon
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  100. Evolutionary and functional insights into the Ski2-like helicase family in Archaea: a comparison of Thermococcales ASH-Ski2 and Hel308 activities
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