The DOI matches its Crossref record; 83 of the 83 references it cites were found in a registry or an index.
The transcriptional landscape of polyploid wheat
Open accessAbstract
Insights from the annotated wheat genome: Wheat is one of the major sources of food for much of the world. However, because bread wheat's genome is a large hybrid mix of three separate subgenomes, it has been difficult to produce a high-quality reference sequence. Using recent advances in sequencing, the International Wheat Genome Sequencing Consortium presents an annotated reference genome with a detailed analysis of gene content among subgenomes and the structural organization for all the chromosomes. Examples of quantitative trait mapping and CRISPR-based genome modification show the potential for using this genome in agricultural research and breeding. Ramírez-González et al.exploited the fruits of this endeavor to identify tissue-specific biased gene expression and coexpression networks during development and exposure to stress. These resources will accelerate our understanding of the genetic basis of bread wheat. Science, this issue p.eaar7191; see also p.eaar6089
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Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing
Benjamini, Y., & Hochberg, Y. (1995) · Journal of the Royal Statistical Society Series B: Statistical Methodology · doi:10.1111/j.2517-6161.1995.tb02031.x · Cited by 109,482
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
Love, M. I., Huber, W., & Anders, S. (2014) · Genome Biology · doi:10.1186/s13059-014-0550-8 · Cited by 95,106
Trimmomatic: a flexible trimmer for Illumina sequence data
Bolger, A. M., Lohse, M., & Usadel, B. (2014) · Bioinformatics · doi:10.1093/bioinformatics/btu170 · Cited by 65,548
Fast gapped-read alignment with Bowtie 2
Langmead, B., & Salzberg, S. L. (2012) · Nature Methods · doi:10.1038/nmeth.1923 · Cited by 56,400
BEDTools: a flexible suite of utilities for comparing genomic features
Quinlan, A. R., & Hall, I. M. (2010) · Bioinformatics · doi:10.1093/bioinformatics/btq033 · Cited by 27,437
WGCNA: an R package for weighted correlation network analysis
Langfelder, P., & Horvath, S. (2008) · BMC Bioinformatics · doi:10.1186/1471-2105-9-559 · Cited by 27,252
MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform
Katoh, K. (2002) · Nucleic Acids Research · doi:10.1093/nar/gkf436 · Cited by 17,027
ggplot2: Elegant Graphics for Data Analysis
Wickham, H. (2009) · doi:10.1007/978-0-387-98141-3 · Cited by 14,447
FactoMineR : An R Package for Multivariate Analysis
Lê, S., Josse, J., & Husson, F. (2008) · Journal of Statistical Software · doi:10.18637/jss.v025.i01 · Cited by 11,603
The control of the false discovery rate in multiple testing under dependency
Benjamini, Y., & Yekutieli, D. (2001) · The Annals of Statistics · doi:10.1214/aos/1013699998 · Cited by 10,490
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Haas, M., Schreiber, M., & Mascher, M. (2019) · Journal of Integrative Plant Biology · doi:10.1111/jipb.12737 · Cited by 149
Self-citationSchoen, A., Joshi, A., Tiwari, V., Gill, B. S., & Rawat, N. (2021) · BMC Plant Biology · doi:10.1186/s12870-020-02822-5 · Cited by 20
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Metadata
- Authors
- Ramírez-González, R. H., Borrill, P., Lang, D., Harrington, S. A., Brinton, J., Venturini, L., Davey, M., Jacobs, J., van Ex, F., Pasha, A., Khedikar, Y., Robinson, S. J., Cory, A. T., Florio, T., Concia, L., Juery, C., Schoonbeek, H., Steuernagel, B., Xiang, D., Ridout, C. J., Chalhoub, B., Mayer, K. F. X., Benhamed, M., Latrasse, D., Bendahmane, A., International Wheat Genome Sequencing Consortium, Wulff, B. B. H., Appels, R., Tiwari, V., Datla, R., Choulet, F., Pozniak, C. J., Provart, N. J., Sharpe, A. G., Paux, E., Spannagl, M., Bräutigam, A., Uauy, C., Korol, A., Sharpe, A. G., Juhász, A., Rohde, A., Bellec, A., Distelfeld, A., Akpinar, B. A., Keller, B., Darrier, B., Gill, B., Chalhoub, B., Steuernagel, B., Feuillet, C., Chaudhary, C., Uauy, C., Pozniak, C., Ormanbekova, D., Xiang, D., Latrasse, D., Swarbreck, D., Barabaschi, D., Raats, D., Sergeeva, E., Salina, E., Paux, E., Cattonaro, F., Choulet, F., Kobayashi, F., Keeble-Gagnere, G., Kaur, G., Muehlbauer, G., Kettleborough, G., Yu, G., Šimková, H., Gundlach, H., Berges, H., Rimbert, H., Budak, H., Handa, H., Small, I., Bartoš, J., Rogers, J., Doležel, J., Keilwagen, J., Poland, J., Melonek, J., Jacobs, J., Wright, J., Jones, J. D. G., Gutierrez-Gonzalez, J., Eversole, K., Nilsen, K., Mayer, K. F. X., Kanyuka, K., Singh, K., Gao, L., Concia, L., Venturini, L., Cattivelli, L., Spannagl, M., Mascher, M., Hayden, M., Abrouk, M., Alaux, M., Luo, M., Valárik, M., Benhamed, M., Singh, N. K., Sharma, N., Guilhot, N., Ravin, N., Stein, N., Olsen, O.-A., Gupta, O. P., Khurana, P., Chhuneja, P., Bayer, P. E., Borrill, P., Leroy, P., Rigault, P., Sourdille, P., Hernandez, P., Flores, R., Ramirez-Gonzalez, R. H., King, R., Knox, R., Appels, R., Zhou, R., Walkowiak, S., Galvez, S., Biyiklioglu, S., Nasuda, S., Sandve, S., Chalabi, S., Weining, S., Sehgal, S., Jindal, S., Belova, T., Letellier, T., Wicker, T., Tanaka, T., Fahima, T., Barbe, V., Tiwari, V., Kumar, V., & Tan, Y.
- Venue
- Science
- Published
- 2018-08-17
- Volume
- 361
- Issue
- 6403
- ISSN
- 0036-8075 (ISSN-L)
- 1095-9203
- OpenAlex
- W2886541918
- Cited by
- 1,018
- References
- 83
- FWCI
- 77.28
- Type
- journal article
- Language
- en
- Open access
- green
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- Ramírez-González, R. H., Borrill, P., Lang, D., Harrington, S. A., Brinton, J., Venturini, L., Davey, M., Jacobs, J., van Ex, F., Pasha, A., Khedikar, Y., Robinson, S. J., Cory, A. T., Florio, T., Concia, L., Juery, C., Schoonbeek, H., Steuernagel, B., Xiang, D., . . . Tan, Y. (2018). The transcriptional landscape of polyploid wheat. Science. https://doi.org/10.1126/science.aar6089
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