Alternative polyadenylation of Pax3 controls muscle stem cell fate and muscle function
Open accessAbstract
Adult stem cells are essential for tissue homeostasis. In skeletal muscle, muscle stem cells (MuSCs) reside in a quiescent state, but little is known about the mechanisms that control homeostatic turnover. Here we show that, in mice, the variation in MuSC activation rate among different muscles (for example, limb versus diaphragm muscles) is determined by the levels of the transcription factor Pax3. We further show that Pax3 levels are controlled by alternative polyadenylation of its transcript, which is regulated by the small nucleolar RNA U1. Isoforms of the Pax3 messenger RNA that differ in their 3' untranslated regions are differentially susceptible to regulation by microRNA miR206, which results in varying levels of the Pax3 protein in vivo. These findings highlight a previously unrecognized mechanism of the homeostatic regulation of stem cell fate by multiple RNA species.
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Highly regenerative Pax3+ MuSCs activate more rapidly than Pax3− counterparts (P<0.001).
“Similar to our experiment in LRCs/nonLRCs, we found that highly regenerative Pax3+ MuSCs also activate more rapidly than Pax3− counterparts (Fig. 5H; P<0.001, Wald test, logistic regression), consistent with a report by De Morree et al. (2019).”
From Aging induces aberrant state transition kinetics in murine muscle stem cells (2020) · cites this paper as De Morree et al., 2019
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Murphy, M. M., Lawson, J. A., Mathew, S. J., Hutcheson, D. A., & Kardon, G. (2011) · Development · doi:10.1242/dev.064162 · Cited by 1,249 · see citing works
An amplified sensitivity arising from covalent modification in biological systems.
Goldbeter, A., & Koshland, D. E. (1981) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.78.11.6840 · Cited by 1,209 · see citing works
Ultrasensitivity in the mitogen-activated protein kinase cascade.
Huang, C. Y., & Ferrell, J. E. (1996) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.93.19.10078 · Cited by 1,186 · see citing works
Molecular regulation of stem cell quiescence
Cheung, T. H., & Rando, T. A. (2013) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm3591 · Cited by 1,148 · see citing works
Self-citationLepper, C., Partridge, T. A., & Fan, C.-M. (2011) · Development · doi:10.1242/dev.067595 · Cited by 1,105 · see citing works
Pax7-expressing satellite cells are indispensable for adult skeletal muscle regeneration
Sambasivan, R., Yao, R., Kissenpfennig, A., Van Wittenberghe, L., Paldi, A., Gayraud-Morel, B., Guenou, H., Malissen, B., Tajbakhsh, S., & Galy, A. (2011) · Development · doi:10.1242/dev.067587 · Cited by 939 · see citing works
U1 snRNP protects pre-mRNAs from premature cleavage and polyadenylation
Kaida, D., Berg, M. G., Younis, I., Kasim, M., Singh, L. N., Wan, L., & Dreyfuss, G. (2010) · Nature · doi:10.1038/nature09479 · Cited by 638 · see citing works
Laker, R. C., Drake, J. C., Wilson, R. J., Lira, V. A., Lewellen, B. M., Ryall, K. A., Fisher, C. C., Zhang, M., Saucerman, J. J., Goodyear, L. J., et al. (2017) · Nature Communications · doi:10.1038/s41467-017-00520-9 · Cited by 529 · see citing works
Strategies for Homeostatic Stem Cell Self-Renewal in Adult Tissues
Simons, B. D., & Clevers, H. (2011) · Cell · doi:10.1016/j.cell.2011.05.033 · Cited by 489 · see citing works
U1 snRNP Determines mRNA Length and Regulates Isoform Expression
Berg, M. G., Singh, L. N., Younis, I., Liu, Q., Pinto, A. M., Kaida, D., Zhang, Z., Cho, S., Sherrill-Mix, S. A., Wan, L., et al. (2012) · Cell · doi:10.1016/j.cell.2012.05.029 · Cited by 464 · see citing works
Isolation of skeletal muscle stem cells by fluorescence-activated cell sorting
Liu, L. A., Cheung, T. H., Charville, G. W., & Rando, T. A. (2015) · Nature Protocols · doi:10.1038/nprot.2015.110 · Cited by 396 · see citing works
Self-citationFISH-quant: automatic counting of transcripts in 3D FISH images
Mueller, F., Senecal, A., Tantale, K., Marie-Nelly, H., Ly, N. Y., Collin, O., Basyuk, E. I., Bertrand, É., Darzacq, X., & Zimmer, C. (2013) · Nature Methods · doi:10.1038/nmeth.2406 · Cited by 369 · see citing works
Liu, N., Williams, A. H., Maxeiner, J. M., Bezprozvannaya, S., Shelton, J. M., Richardson, J. A., Bassel‐Duby, R., & Olson, E. N. (2012) · Journal of Clinical Investigation · doi:10.1172/jci62656 · Cited by 349 · see citing works
Divergent functions of murine Pax3 and Pax7 in limb muscle developmentPreprint
Relaix, F., Rocancourt, D., Mansouri, A., & BUCKINGHAM, M. E. (2004) · Genes & Development · doi:10.1101/gad.301004 · Cited by 313 · see citing works
Stem Cell Quiescence: Dynamism, Restraint, and Cellular Idling
van Velthoven, C. T. J., & Rando, T. A. (2019) · Cell stem cell · doi:10.1016/j.stem.2019.01.001 · Cited by 313 · see citing works
Self-citationMuscle stem cells contribute to myofibres in sedentary adult mice
Keefe, A. C., Lawson, J. A., Flygare, S. D., Fox, Z. D., Colasanto, M. P., Mathew, S. J., Yandell, M., & Kardon, G. (2015) · Nature Communications · doi:10.1038/ncomms8087 · Cited by 279 · see citing works
SMASH – semi-automatic muscle analysis using segmentation of histology: a MATLAB application
Smith, L., & Barton, E. R. (2014) · Skeletal Muscle · doi:10.1186/2044-5040-4-21 · Cited by 223 · see citing works
Pervasive satellite cell contribution to uninjured adult muscle fibers
Pawlikowski, B. T., Pulliam, C., Betta, N. D., Kardon, G., & Olwin, B. B. (2015) · Skeletal Muscle · doi:10.1186/s13395-015-0067-1 · Cited by 182 · see citing works
Alternative Polyadenylation Mediates MicroRNA Regulation of Muscle Stem Cell Function
Boutet, S. C., Cheung, T. H., Quach, N. L., Liu, L., Prescott, S. L., Edalati, A., Iori, K., & Rando, T. A. (2012) · Cell Stem Cell · doi:10.1016/j.stem.2012.01.017 · Cited by 150 · see citing works
Self-citationPAX3 Confers Functional Heterogeneity in Skeletal Muscle Stem Cell Responses to Environmental Stress
Vartanian, A. D., Quétin, M., Michineau, S., Aurade, F., Hayashi, S., Dubois, C., Rocancourt, D., Drayton‐Libotte, B., Szegedi, A., BUCKINGHAM, M. E., et al. (2019) · Cell stem cell · doi:10.1016/j.stem.2019.03.019 · Cited by 105 · see citing works
Scaramozza, A., Park, D., Kollu, S., Beerman, I., Sun, X., Rossi, D. J., Lin, C. P., Scadden, D. T., Crist, C., & Brack, A. S. (2019) · Cell Stem Cell · doi:10.1016/j.stem.2019.03.020 · Cited by 93 · see citing works
Staufen1 inhibits MyoD translation to actively maintain muscle stem cell quiescence
de Morrée, A., van Velthoven, C. T. J., Gan, Q., Salvi, J. S., Klein, J. D. D., Akimenko, I., Quarta, M., Biressi, S., & Rando, T. A. (2017) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1708725114 · Cited by 91 · see citing works
Self-citationPorpiglia, E., Hidalgo, D., Koulnis, M., Tzafriri, A. R., & Socolovsky, M. (2012) · PLoS Biology · doi:10.1371/journal.pbio.1001383 · Cited by 44 · see citing works
Luo, D., de Morrée, A., Boutet, S. C., Quach, N. L., Natu, V. S., Rustagi, A., & Rando, T. A. (2017) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1613592114 · Cited by 34 · see citing works
Self-citationKoushik, S. V., Chen, H., Wang, J., & Conway, S. J. (2002) · genesis · doi:10.1002/gene.10051 · Cited by 23 · see citing works
Conway, S. J. (2011) · genesis · doi:10.1002/dvg.22001 · Cited by 1 · see citing works
Flagged first, then by citations
Cited by
Sorted by citations
Perspectives on skeletal muscle stem cells
Relaix, F., Bencze, M., Borok, M. J., Vartanian, A. D., Gattazzo, F., Mademtzoglou, D., Perez-Diaz, S., Prola, A., Fernandez, P. C. R., Rotini, A., et al. (2021) · Nature Communications · doi:10.1038/s41467-020-20760-6 · Cited by 389 · see citing works
Regulation of adult stem cell quiescence and its functions in the maintenance of tissue integrity
de Morrée, A., & Rando, T. A. (2023) · Nature Reviews Molecular Cell Biology · doi:10.1038/s41580-022-00568-6 · Cited by 243 · see citing works
Self-citationFarup, J., Just, J., de Paoli, F. V., Lin, L., Jensen, J., Billeskov, T. B., Sánchez-Román, I., Cömert, C., Møller, A. B., Madaro, L., et al. (2021) · Cell Metabolism · doi:10.1016/j.cmet.2021.10.001 · Cited by 154 · see citing works
Self-citationEffective tools for RNA-derived therapeutics: siRNA interference or miRNA mimicry
Wang, P., Zhou, Y., & Richards, M. (2021) · Theranostics · doi:10.7150/thno.62642 · Cited by 123 · see citing works
Silver, J. S., Günay, K. A., Cutler, A. A., Vogler, T. O., Brown, T. E., Pawlikowski, B. T., Bednarski, O. J., Bannister, K. L., Rogowski, C. J., Mckay, A. G., et al. (2021) · Science Advances · doi:10.1126/sciadv.abe4501 · Cited by 117 · see citing works
Aging induces aberrant state transition kinetics in murine muscle stem cells
Kimmel, J. C., Hwang, A. B., Scaramozza, A., Marshall, W. F., & Brack, A. S. (2020) · Development · doi:10.1242/dev.183855 · Cited by 95 · see citing works
Post-Transcriptional Regulation of Homeostatic, Stressed, and Malignant Stem Cells
Chua, B. A., van der Werf, I. M., Jamieson, C. H. M., & Signer, R. A. J. (2020) · Cell stem cell · doi:10.1016/j.stem.2020.01.005 · Cited by 94 · see citing works
Porpiglia, E., Mai, T., Kraft, P. E., Holbrook, C. A., de Morrée, A., Gonzalez, V. D., Hilgendorf, K. I., Frésard, L., Trejo, A., Bhimaraju, S., et al. (2022) · Cell stem cell · doi:10.1016/j.stem.2022.10.009 · Cited by 81 · see citing works
Multiomics reveals glutathione metabolism as a driver of bimodality during stem cell aging
Benjamin, D. I., Brett, J. O., Both, P., Benjamin, J. S., Ishak, H. D., Kang, J., Kim, S., Chung, M., Arjona, M., Nutter, C. W., et al. (2023) · Cell Metabolism · doi:10.1016/j.cmet.2023.02.001 · Cited by 79 · see citing works
Self-citationRegulation of myogenic gene expression
Vicente‐García, C., Hernández‐Camacho, J. D., & Carvajal, J. J. (2022) · Experimental Cell Research · doi:10.1016/j.yexcr.2022.113299 · Cited by 65 · see citing works
Sommerkamp, P., Altamura, S., Renders, S., Narr, A., Ladel, L., Zeisberger, P., Eiben, P. L., Fawaz, M., Rieger, M., Cabezas-Wallscheid, N., et al. (2020) · Cell Stem Cell · doi:10.1016/j.stem.2020.03.003 · Cited by 57 · see citing works
On the function and relevance of alternative 3′‐ UTRs in gene expression regulation
Pereira‐Castro, I., & Moreira, A. (2021) · Wiley Interdisciplinary Reviews - RNA · doi:10.1002/wrna.1653 · Cited by 57 · see citing works
Transcriptomic and proteomic signatures of stemness and differentiation in the colon crypt
Habowski, A. N., Flesher, J. L., Bates, J. M., Tsai, C., Martin, K., Zhao, R., Ganesan, A. K., Edwards, R. A., Shi, T., Wiley, H. S., et al. (2020) · Communications Biology · doi:10.1038/s42003-020-01181-z · Cited by 47 · see citing works
Regulation and function of alternative polyadenylation in development and differentiation
Gallicchio, L., Olivares, G. H., Berry, C. W., & Fuller, M. T. (2023) · RNA Biology · doi:10.1080/15476286.2023.2275109 · Cited by 47 · see citing works
Post-Transcriptional Regulation in Skeletal Muscle Development, Repair, and Disease
Weskamp, K., Olwin, B. B., & Parker, R. (2020) · Trends in Molecular Medicine · doi:10.1016/j.molmed.2020.12.002 · Cited by 45 · see citing works
Alternative Polyadenylation in Stem Cell Self-Renewal and Differentiation
Sommerkamp, P., Cabezas‐Wallscheid, N., & Trumpp, A. (2021) · Trends in Molecular Medicine · doi:10.1016/j.molmed.2021.04.006 · Cited by 39 · see citing works
miR-206 enforces a slow muscle phenotype
Bjorkman, K. K., Guess, M. G., Harrison, B. C., Polmear, M. M., Peter, A. K., & Leinwand, L. A. (2020) · Journal of Cell Science · doi:10.1242/jcs.243162 · Cited by 36 · see citing works
Collins, B. C., & Kardon, G. (2021) · Development · doi:10.1242/dev.199861 · Cited by 34 · see citing works
U1 snRNP Telescripting Roles in Transcription and Its MechanismPreprint
Di, C., So, B. R., Cai, Z., Arai, C., Duan, J., & Dreyfuss, G. (2019) · Cold Spring Harbor Symposia on Quantitative Biology · doi:10.1101/sqb.2019.84.040451 · Cited by 34 · see citing works
Liu, X., Xiong, W., Ye, M., Lu, T., Yuan, K., Chang, S., Han, Y., Wang, Y., Lü, L., & Bao, Y. (2023) · Signal Transduction and Targeted Therapy · doi:10.1038/s41392-023-01669-0 · Cited by 32 · see citing works
All for One and One for All: Regenerating Skeletal MusclePreprint
Hindi, S. M., & Millay, D. P. (2021) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a040824 · Cited by 32 · see citing works
Wang, M., Song, W., Jin, C., Huang, K., Yu, Q., Qi, J., Zhang, Q., & He, Y. (2021) · International Journal of Molecular Sciences · doi:10.3390/ijms22073769 · Cited by 27 · see citing works
Scinderin promotes fusion of electron transport chain dysfunctional muscle stem cells with myofibers
Wang, X., Shelton, S. D., Bordieanu, B., Frank, A. R., Yi, Y., Venigalla, S. S. K., Gu, Z., Lesner, N. P., Glogauer, M., Chandel, N. S., et al. (2022) · Nature Aging · doi:10.1038/s43587-021-00164-x · Cited by 25 · see citing works
Msi2‐mediated MiR7a‐1 processing repression promotes myogenesis
Yang, W., Yang, L., Wang, J., Zhang, Y., Li, S., Yin, Q., Suo, J., Ma, R., Ye, Y., Cheng, H., et al. (2021) · Journal of Cachexia Sarcopenia and Muscle · doi:10.1002/jcsm.12882 · Cited by 23 · see citing works
The roles of miRNAs in adult skeletal muscle satellite cells
Koopmans, P. J., Ismaeel, A., Goljanek‐Whysall, K., & Murach, K. A. (2023) · Free Radical Biology and Medicine · doi:10.1016/j.freeradbiomed.2023.10.403 · Cited by 22 · see citing works
Heng, D., Sheng, X., Tian, C., Li, J., Liu, L., Gou, M., & Liu, L. (2021) · Aging Cell · doi:10.1111/acel.13304 · Cited by 18 · see citing works
A Long Journey before Cycling: Regulation of Quiescence Exit in Adult Muscle Satellite Cells
Zhou, S., Han, L., & Wu, Z. (2022) · International Journal of Molecular Sciences · doi:10.3390/ijms23031748 · Cited by 18 · see citing works
Lin28a maintains a subset of adult muscle stem cells in an embryonic-like state
Wang, P., Liu, X., Jun‐Hao, E. T., Min‐Wen, J. C., Chua, Y. B., Luo, L., Ma, S., Cao, W., Ma, W., Yao, Z., et al. (2023) · Cell Research · doi:10.1038/s41422-023-00818-y · Cited by 18 · see citing works
The multifaceted role of MyoD in adult skeletal muscle: homeostasis, regeneration, and diseases
Tsuji, R., Hayashi, T., Takahashi, S., Asakura, A., & Fujita, R. (2025) · American Journal of Physiology-Cell Physiology · doi:10.1152/ajpcell.00334.2025 · Cited by 18 · see citing works
Transcription factor networks in cellular quiescence
Mitra, M., Batista, S., & Coller, H. A. (2025) · Nature Cell Biology · doi:10.1038/s41556-024-01582-w · Cited by 16 · see citing works
MCL1 alternative polyadenylation is essential for cell survival and mitochondria morphology
Pereira‐Castro, I., García, B., Curinha, A., Neves‐Costa, A., Conde‐Sousa, E., Moita, L. F., & Moreira, A. (2022) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-022-04172-x · Cited by 15 · see citing works
Aedes aegypti miRNA-33 modulates permethrin induced toxicity by regulating VGSC transcripts
Kubik, T. D., Snell, T. K., Saavedra-Rodríguez, K., Wilusz, J., Anderson, J. R., Lozano‐Fuentes, S., Black, W. C., & Campbell, C. L. (2021) · Scientific Reports · doi:10.1038/s41598-021-86665-6 · Cited by 14 · see citing works
Alternative polyadenylation in cancer: Molecular mechanisms and clinical application
Zhang, Y., Huang, Z., Lu, W., & Liu, Z. (2024) · Critical Reviews in Oncology/Hematology · doi:10.1016/j.critrevonc.2024.104599 · Cited by 13 · see citing works
Adult progenitor rejuvenation with embryonic factors
Wang, P., Liu, X., Chen, Y., Jun‐Hao, E. T., Yao, Z., Min‐Wen, J. C., Chua, B. Y.-J., Ma, S., Ma, W., Luo, L., et al. (2023) · Cell Proliferation · doi:10.1111/cpr.13459 · Cited by 12 · see citing works
Jin, C., Yan, K., Wang, M., Song, W., Wáng, B., Men, Y., Niu, J., He, Y., Zhang, Q., & Qi, J. (2024) · Development · doi:10.1242/dev.202296 · Cited by 13 · see citing works
A dysfunctional miR-1-TRPS1-MYOG axis drives ERMS by suppressing terminal myogenic differentiation
Hüttner, S. S., Henze, H., Elster, D., Koch, P., Anderer, U., von Eyß, B., & von Maltzahn, J. (2023) · Molecular Therapy · doi:10.1016/j.ymthe.2023.07.003 · Cited by 11 · see citing works
The extracellular matrix niche of muscle stem cells
Chrysostomou, E., & Mourikis, P. (2024) · Current topics in developmental biology/Current Topics in Developmental Biology · doi:10.1016/bs.ctdb.2024.01.021 · Cited by 8 · see citing works
Discovery of alternative polyadenylation dynamics from single cell types
Ye, C., Lin, J., & Li, Q. Q. (2020) · Computational and Structural Biotechnology Journal · doi:10.1016/j.csbj.2020.04.009 · Cited by 10 · see citing works
Plasticity of muscle stem cells in homeostasis and aging
Porpiglia, E., & Blau, H. M. (2022) · Current Opinion in Genetics & Development · doi:10.1016/j.gde.2022.101999 · Cited by 9 · see citing works
Sun, Y., Pang, Y., Wu, X., Zhu, R., Wang, L., Tian, M., He, X., Liu, D., & Yang, X. (2024) · Communications Biology · doi:10.1038/s42003-024-07332-w · Cited by 9 · see citing works
In vivo self-renewal and expansion of quiescent stem cells from a non-human primate
Kang, J., Kanugovi, A., Stella, M. P. J., Frimand, Z., Farup, J., Urtasun, A., Liu, S., Clausen, A.-S., Ishak, H. D., Bui, S., et al. (2025) · Nature Communications · doi:10.1038/s41467-025-58897-x · Cited by 9 · see citing works
Self-citationGirolamo, D. D., Benavente-Diaz, M., Murolo, M., Grimaldi, A., Lopes, P. T., Evano, B., Kuriki, M., Gioftsidi, S., Laville, V., Tinévez, J.-Y., et al. (2024) · Development · doi:10.1242/dev.202144 · Cited by 8 · see citing works
MicroRNA control of the myogenic cell transcriptome and proteome: the role of miR-16
Lim, S., Lee, D. E., da Silva, F. M., Koopmans, P. J., Vechetti, I. J., von Walden, F., Greene, N. P., & Murach, K. A. (2023) · American Journal of Physiology-Cell Physiology · doi:10.1152/ajpcell.00071.2023 · Cited by 8 · see citing works
Blackburn, D. M., Sahinyan, K., Hernández-Corchado, A., Lazure, F., Richard, V. R., Raco, L., Perron, G., Zahedi, R. P., Borchers, C. H., Lepper, C., et al. (2024) · iScience · doi:10.1016/j.isci.2024.110241 · Cited by 7 · see citing works
Wang, J., Suo, J., Yang, R., Zhang, C.-L., Li, X., Han, Z., Zhou, W., Liu, S., & Gao, Q. (2023) · Frontiers in Genetics · doi:10.3389/fgene.2023.1281601 · Cited by 7 · see citing works
Alternative Polyadenylation of Malic Enzyme 1 Is Essential for Accelerated Adipogenesis
Qin, X., Meng, C., Li, C., Zhao, W., Ren, S., Cao, S., & Zhou, G. (2023) · Journal of Agricultural and Food Chemistry · doi:10.1021/acs.jafc.3c06289 · Cited by 5 · see citing works
Li, C., Xu, J., Zhang, Y., Ding, Y., Zhou, X., Su, Z., Qu, C. F., Liang, J., Han, Y., Wang, D., et al. (2024) · Journal of Animal Science · doi:10.1093/jas/skae357 · Cited by 4 · see citing works
Muscle stem cell niche dynamics during muscle homeostasis and regeneration
Yin, Y., He, G. J., Hu, S., Tse, E. H. Y., & Cheung, T. H. (2024) · Current topics in developmental biology/Current Topics in Developmental Biology · doi:10.1016/bs.ctdb.2024.02.008 · Cited by 3 · see citing works
A Novel PAX3 Variant in a Chinese Pedigree with Nonsyndromic Cleft Lip With or Without Palate
Liang, W., Huang, W., Sun, B., Zhong, W., Zhang, Y., Zhang, J., Zhou, Z., Lin, J., & Chen, F. (2021) · Genetic Testing and Molecular Biomarkers · doi:10.1089/gtmb.2021.0111 · Cited by 4 · see citing works
Han, C., Liu, S., Ye, S., Chen, K., Chen, D., Wang, K., Liang, W., Zhong, S., Liu, L., Li, S., et al. (2025) · Comparative Biochemistry and Physiology Part D Genomics and Proteomics · doi:10.1016/j.cbd.2025.101423 · Cited by 3 · see citing works
3′UTR shortening alleviates miRNA repression of mRNAs critical for muscle stem cell differentiation
Zhu, Y., Wang, J., Tong, D., Jia, P., Chen, S., Li, Y., Fu, J., Li, Q., Hu, P., Zhou, Y., et al. (2025) · The EMBO Journal · doi:10.1038/s44318-025-00663-2 · Cited by 3 · see citing works
Tsopoulidis, N., Yagi, M., Brumbaugh, J., Ito, S., López-Soriano, V., Morris, R., Yoon, Y., Messemer, K. A., Lin, K., Zaniewski, E. F., et al. (2026) · Nature Communications · doi:10.1038/s41467-026-68630-x · Cited by 3 · see citing works
Navigating translational control of gene expression in satellite cells
Jiogo, H., & Crist, C. G. (2024) · Current topics in developmental biology/Current Topics in Developmental Biology · doi:10.1016/bs.ctdb.2024.02.013 · Cited by 3 · see citing works
Li, Y., Wang, B., Sun, W., Wang, W., Wang, Y., Wang, W., Kong, C., Chen, X., & Lu, S. (2024) · Materials & Design · doi:10.1016/j.matdes.2024.113027 · Cited by 3 · see citing works
Absolute Quantification of mRNA Isoforms in Adult Stem Cells Using Microfluidic Digital PCR
Barman, S. D., Frimand, Z., & de Morrée, A. (2023) · BIO-PROTOCOL · doi:10.21769/bioprotoc.4811 · Cited by 3 · see citing works
Regulation and function of Pax3 in muscle stem cell heterogeneity and stress response
Relaix, F., Zoglio, V., Chebouti, S., de Lima, J. E., & Lafuste, P. (2025) · Journal of Muscle Research and Cell Motility · doi:10.1007/s10974-025-09701-2 · Cited by 3 · see citing works
QPAT-seq, a rapid and deduplicatable method for quantification of poly(A) site usages
Lin, J., Ye, C., & Li, Q. Q. (2021) · Methods in enzymology on CD-ROM/Methods in enzymology · doi:10.1016/bs.mie.2021.04.002 · Cited by 3 · see citing works
Beyond the genome: RNA control of stem cells
Xi, H., & Pyle, A. D. (2019) · Science · doi:10.1126/science.aaz4859 · Cited by 3 · see citing works
Xu, T., Hu, Y.-X., Fan, H., Zheng, X., Jiang, Q., Lizhi, L., Li, J., Lin, Z., & Gu, L. (2025) · PLoS ONE · doi:10.1371/journal.pone.0338390 · Cited by 2 · see citing works
Wang, X., Lin, Y., Li, Z., Li, Y.-Q., & Chen, M. (2024) · Cancer Informatics · doi:10.1177/11769351231180789 · Cited by 2 · see citing works
Gasdermin D unlocks metabolic pathways to enhance tissue regeneration
Shubhra, Q. T. H. (2024) · Cellular and Molecular Immunology · doi:10.1038/s41423-024-01239-6 · Cited by 2 · see citing works
Zhu, H., Lin, X., & Diao, Y. (2021) · Journal of Bio-X Research · doi:10.1097/jbr.0000000000000105 · Cited by 2 · see citing works
Rôle du facteur de transcription PAX3 au cours de la myogenèse
Zoglio, V., de Lima, J. E., & Relaix, F. (2024) · médecine/sciences · doi:10.1051/medsci/2024139 · Cited by 1 · see citing works
Zhao, P., Jiang, Z., He, X., Tian, T., He, F., & Ma, X. (2026) · Biology · doi:10.3390/biology15020158 · Cited by 1 · see citing works
Caramori, G., Nucera, F., Coppolino, I., Bello, F. L., Ruggeri, P., Ito, K., Stefano, A. D., & Adcock, I. M. (2020) · Elsevier eBooks · doi:10.1016/b978-0-12-801238-3.11699-x · Cited by 1 · see citing works
Molecular Regulation of Skeletal Muscle Stem Cells
Borok, M. J., Akar, R. B., Mourikis, P., & Relaix, F. (2022) · Elsevier eBooks · doi:10.1016/b978-0-12-821618-7.00156-5
Mesenchymal Stem Cells and Sarcoma
Hatina, J., Kripnerová, M., Dejmek, J., Dolejšová, M., & Pešta, M. (2024) · Elsevier eBooks · doi:10.1016/b978-0-443-15717-2.00116-5
Ou, J., Liu, H., Park, S., Green, M. R., & Zhu, L. J. (2024) · Frontiers in Bioscience-Scholar · doi:10.31083/j.fbs1604021
Investigation of the molecular diversity defining muscle stem cell heterogeneity
Benavente-Diaz, M. (2020) · theses.fr (ABES) · doi:10.70675/a5426795z7433z497fz9698z63a9efd33839
Emerging roles of microRNAs and other non-coding transcriptome in muscular dystrophies
Abdelrehim, F. G., Sadek, Z., Fahim, S. A., El-Ekiaby, N. M., Abdelaziz, A. I., & Fawzy, I. O. (2026) · Inflammation and Regeneration · doi:10.1186/s41232-026-00415-7
Nuclear Speckles Regulate Splicing During Muscle Stem Cell Activation and AgingPreprint
Guzman, S. D., Duran, P., Xiao, Y., Song, Y., Welch, J. D., He, C., & Aguilar, C. A. (2026) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.64898/2026.05.04.722644
Jin, L., Yao, L., Xu, H., Peng, C., Yang, Y., Li, B., Cao, G., & Lu, C. (2026) · BMC Genomics · doi:10.1186/s12864-026-12940-3
Liang, M., Zhang, R., An, Q., Cen, K., Zou, L., Zou, C., Wei, Y., Wei, J., & Deng, Y. (2026) · Food Chemistry Molecular Sciences · doi:10.1016/j.fochms.2026.100423
Zhao, P., Wandai, C., Ma, G., Chen, X., Ma, X., & Ma, X. (2026) · Genomics · doi:10.1016/j.ygeno.2026.111276
Cannone, E., Spina, M. L., Gnutti, B., Tesoriero, C., Castagnaro, S., Tobia, C., Via, L. L., Sabatelli, P., Faldini, C., Fiume, G., et al. (2026) · Translational research · doi:10.1016/j.trsl.2026.06.007
Ren, S., Qin, X., Zhang, L., Li, C., Yu, Y., Zhou, W., Zhao, M., & Zhou, G. (2026) · Bioscience Biotechnology and Biochemistry · doi:10.1093/bbb/zbag095
Mechanisms of transcription termination across the coding and noncoding loci of the genome
Song, A., Hu, M., & Chen, F. (2026) · Nature Reviews Molecular Cell Biology · doi:10.1038/s41580-026-01005-8
A who’s who of cell types in skeletal muscle
Barman, S. D., Frimand, Z., Stella, M. P. J., Clausen, A.-S., Olsen, S. L. W., & de Morrée, A. (2026) · Communications Biology · doi:10.1038/s42003-026-10803-x
PAX3-SIX2 muscle stem cell heterogeneity drives muscle-specific repair dynamics diversification
Zoglio, V., Chebouti, S., Issa, F., Massard, T., Polin, B., Manin, S., Maire, P., Choi, D., Chan, I. T. C., Cheung, T. H., et al. (2026) · Science Advances · doi:10.1126/sciadv.aed0880
Myoclone Assay: Clonogenic Expansion of Activating Muscle Stem Cells
Stella, M., Damgaard, O., Frimand, Z., & de Morrée, A. (2026) · BIO-PROTOCOL · doi:10.21769/bioprotoc.5869
- Authors
- de Morree, A., Klein, J. D. D., Gan, Q., Farup, J., Urtasun, A., Kanugovi, A., Bilen, B., van Velthoven, C. T. J., Quarta, M., & Rando, T. A.
- Affiliations
- Department of Neurology and Neurological Sciences, Stanford University School of Medicine, Stanford, CA, USA.
- Stanford Medicine (US)
- Aarhus University (DK)
- VA Palo Alto Health Care System (US)
- Corresponding author
- Rando, Thomas A.
- ORCID
- Venue
- Science
- Published
- 2019-11-08
- Volume
- 366
- Issue
- 6466
- Pages
- 734-738
- ISSN
- 0036-8075 (ISSN-L)
- 1095-9203
- PMC
- PMC7046176
- OpenAlex
- W2985425244
- Cited by
- 81
- References
- 26
- Citations by year
- 2026: 13 · 2025: 7 · 2024: 15 · 2023: 12 · 2022: 7 · 2021: 16 · 2020: 9 · 2019: 2
- FWCI
- 2.81
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Science (publishedVersion)
- PubMed (publishedVersion)
- PubMed Central (acceptedVersion)
- Funders
- National Institutes of Health (R01 AR062185, R37 AG023806, P01 AG036695)
- U.S. Department of Veterans Affairs (BLR&D Merit Review)
- Glenn Foundation for Medical Research
- Muscular Dystrophy Association (MDA313960)
- FSH Society
- Lundbeckfonden (R232-2016-2459)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Muscle Physiology and Disorders
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA Research and Splicing
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Developmental Biology and Gene Regulation
- Keywords
- Pax3, alternative polyadenylation, muscle stem cells, skeletal muscle homeostasis, miR-206, 3' untranslated region, stem cell quiescence, stem cell activation, muscle regeneration, protein isoforms
- MeSH terms
- PAX3 Transcription Factor, Animals, Mice, Mutant Strains, RNA, Messenger, Ribonucleoprotein, U1 Small Nuclear, Muscle, Skeletal, 3' Untranslated Regions, Polyadenylation, Myoblasts, Skeletal, MicroRNAs, Mice, Gene Knockdown Techniques
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