Recurrent deletions in the SARS-CoV-2 spike glycoprotein drive antibody escape
McCarthy, Kevin R., Rennick, Linda J., Nambulli, Sham, Robinson-McCarthy, Lindsey R., Bain, William G., Haidar, Ghady, Duprex, W. Paul·2021·Science
Cited by (538)
Items 501–538 of 538
- Enhanced stability of the SARS CoV-2 spike glycoprotein trimer following modification of an alanine cavity in the protein corePantelis Poumbourios, Christine Langer, Irene Boo, Tasnim Zakir, Anouschka Akerman, Vanessa Milogiannakis, Anupriya Aggarwal, Stuart Grant Turville, Heidi E. Drummer · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
- Is the Stalk of the SARS-CoV-2 Spike Protein Druggable?Ludovico Pipitò, Christopher Arthur Reynolds, Giuseppe Deganutti · 2022 · Viruses
- The SARS-CoV-2 variants around us: A literature reviewD. C. Aloysius, B. H. Siswati · 2023 · Malaysian Journal of Microbiology
- Rational Use of Monoclonal Antibodies as Therapeutic Treatment in an Oncologic Patient with Long COVIDMaria Grazia Cusi, Anna Maria Di Giacomo, Gabriele Anichini, Gianni Gori Savellini, Chiara Terrosi, Claudia Gandolfo, Michele Maio · 2023 · Viruses
- Spike glycoprotein of coronavirus of animals and sars-Cov-2Bramhadev Pattnaik, Suresh Puttahonnappa Kuralayanapalya, Chandan Shivamallu, Shiva Prasad Kollur, Mahendra Pal Yadav, Siju Susan Jacob, Awadh Bihari Pandey, Kirankere Ananthapadmanabha Shyamsundar, Sharanagouda Shiddanagouda Patil · 2022 · Indian Journal of Comparative Microbiology Immunology and Infectious Diseases
- SARS-CoV-2: Structure, Pathogenesis, and DiagnosisAarthi Goverdhan · 2023 · Elsevier eBooks
- Lessons that can be learned from the SARS-CoV-2 pandemic and their impact on the prophylaxis and treatment development for neglected tropical arbovirusesDanilo Rosa Nunes, Danilo Bancalero Mendonça Lucchi, Robert Andreata‐Santos, Luiz Mário Janini, Carla Torres Braconi · 2023 · Frontiers in Drug Discovery
- Cryo-EM reveals variation in structural motifs within animal SARS-related coronavirus spike proteinsMihnea Bostina, Francesca R. Hills, Alice-Roza Eruera, Fátima Jorge, Richard A. Easingwood, James Hodgkinson‐Bean, Simon H. J. Brown, James C. Bouwer, Laura N. Burga · 2023 · Research Square
- Tracking SARS-CoV-2 variants in Kurdistan Region of Iraq.Pyman Mohamed Mohamedsalih, Karzan Jalal Salih, Banaz Omar Kareem, Dana Khdr Sabir · 2023 · ZANCO Journal of Pure and Applied Sciences
- Notable variants of SARS COV 2 Virus - A Mini-ReviewEbidor Ufoumanefe Lawani-Luwaji, Tolulope Alade, John B.U. · 2023 · African Journal of Biology and Medical Research
- The Covid-19 and TB Syndemic: Differences and SimilaritiesStefan H. E. Kaufmann, Alan Sher, Alex Sigal, Birgit Sawitzki · 2023 · Frontiers research topics
- CNN-Based Detection of SARS-CoV-2 Variants Using Spike Protein HydrophobicityMohammad Jamhuri, Mohammad Isa Irawan, Imam Mukhlash, Ni Nyoman Tri Puspaningsih · 2023 · International Conference on Advanced Engineering and Technologies (ICONNIC)
- A Comparative Analysis of Innate Immune Responses and the Structural Characterization of Spike from SARS-CoV-2 Gamma Variants and SubvariantsAline Miranda Scovino, Elizabeth Chen Dahab, Israel Diniz-Lima, Etiele de Senna Silveira, Shana Priscila Coutinho Barroso, Karina Martins-Cardoso, Dirlei Nico, Gustavo José Makhoul, Elias Barbosa da Silva-Júnior, Célio Geraldo Freire-de-Lima et al. · 2024 · Microorganisms
- Unveiling Inter- and Intra-Patient Sequence Variability with a Multi-Sample Coronavirus Target Enrichment ApproachSara Lado, Jakob Thannesberger, Kathrin Spettel, Jurica Arapović, Bibiana I. Ferreira, Marialuisa Lavitrano, Christoph Steininger · 2024 · Viruses
- Differential epitope prediction across diverse circulating variants of SARS-COV-2 in BrazilVanessa de Melo Cavalcanti-Dantas, Brenda Fernandes, Pedro Henrique Lopes Ferreira Dantas, Glaucielle Ramalho Uchoa, Andrei Félix Mendes, Waldecir Oliveira de Araújo Júnior, Lúcio Roberto Cançado Castellano, Ana Isabel Vieira Fernandes, Luíz Ricardo Goulart, Renato Antônio dos Santos Oliveira et al. · 2024 · Computational Biology and Chemistry
- SARS-CoV-2 spike protein in infectivityAlaa Muayad Altaie, Rania Hamdy, Mohamed Ibrahim Husseiny, Sameh S. M. Soliman · 2025 · Elsevier eBooks
- Differential Severity of Sars-Cov-2 Variant Infections in Children and Adults with Covid-19Charles Y. Chiu, Noah Brazer, Venice Servellita, Chengshi Jin, Abiodun Foresythe, Miriam Oseguera, Jenny Nguyen, Nanami Sumimoto, Hee Jae Huh, Andries Feder et al. · 2025 · SSRN Electronic Journal
- A Novel Antiviral Therapeutic Platform: Anchoring IFN-β to the Surface of Infectious Virions Equips Interferon-Evasive Virions with Potent Antiviral ActivityH. Jabbour, Alexander G. Bastian, Kayla B. DeOca, Mark D. Mannie · 2025 · Viruses
- The structure-based approaches to computing viral fitnessRukmankesh Mehra, Shivani Thakur · 2025 · Advances in protein chemistry and structural biology
- A SARS-CoV-2 entry inhibitor trimerizes to lock the spike protein in a closed conformationHuihui Mou, Bo Gao, Gang Ye, Lizhou Zhang, Divyasha Saxena, Fan Bu, Jyoti Vishwakarma, Shuo Zhou, Claudia Ruiz Bayona, Li Lin et al. · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
- Additional file 1 of Characterization of intrinsic and effective fitness changes caused by temporarily fixed mutations in the SARS-CoV-2 spike E484 epitope and identification of an epistatic precondition for the evolution of E484A in variant OmicronSimon Schröder, Richter, Anja, Veith, Talitha, Jackson Emanuel, Luca Gudermann, Kirstin Friedmann, Lara Maria Jeworowski, Barbara Mühlemann, Terry C. Jones, Marcel A. Müller et al. · 2024 · Figshare
- Additional file 2 of Evidence of SARS-CoV-2 convergent evolution in immunosuppressed patients treated with antiviral therapiesShuchen Feng, Gail Reid, Nina M. Clark, Harrington, Amanda, Susan L. Uprichard, Susan C. Baker · 2024 · Figshare
- Additional file 1 of Evidence of SARS-CoV-2 convergent evolution in immunosuppressed patients treated with antiviral therapiesShuchen Feng, Gail Reid, Nina M. Clark, Harrington, Amanda, Susan L. Uprichard, Susan C. Baker · 2024 · Figshare
- Defining the Antigenic Topology and Prospective Binding Breadth of Vaccination-induced SARS-CoV-2 Neutralizing AntibodiesDeepika Jaiswal, Clara G. Altomare, Daniel C. Adelsberg, Iden A. Sapse, Florian Krammer, Viviana R. Simon, Ali H. Ellebedy, Goran Bajic · 2026 · bioRxiv (Cold Spring Harbor Laboratory)
- Analyse du cycle du SARS-CoV-2 en modèle cellulaire par microscopie électronique à transmissionSébastien Eymieux · 2023 · theses.fr (ABES)
- The role of O-GlcNAcylation in the pathophysiology of Systemic Lupus ErythematosusGaël Galli · 2022 · theses.fr (ABES)
- Caractérisation de la diversité génétique de SARS-CoV-2 dans des échantillons cliniquesWahiba Bader · 2022 · theses.fr (ABES)
- Modeling and Standard Binding Free Energy Calculations of Complex Biological ObjectsMarharyta Blazhynska · 2023 · theses.fr (ABES)
- The mechanisms and consequences of SARS-CoV-2 induced cell-to-cell fusionWilliam Bolland · 2024 · theses.fr (ABES)
- Combined Effects of Severe Immunocompromise and Prolonged Virus Shedding on Within-Host SARS-CoV-2 Evolution in COVID-19Yuichiro Hirata, Kenichiro Takahashi, Noriko Iwamoto, Yong Dam Jeong, Shô Miyamoto, Junna Kawasaki, Montie T. Harrison, Sohtaro Mine, Shun Iida, Shinji Saito et al. · 2026 · medRxiv
- Defining the Antigenic Topology and Prospective Binding Breadth of Vaccination-induced SARS-CoV-2 Neutralizing AntibodiesDeepika Jaiswal, Clara G. Altomare, Daniel C. Adelsberg, Iden A. Sapse, Florian Krammer, Viviana R. Simon, Ali H. Ellebedy, Goran Bajic · 2026 · eLife
- Defining the Antigenic Topology and Prospective Binding Breadth of Vaccination-induced SARS-CoV-2 Neutralizing AntibodiesDeepika Jaiswal, Clara G. Altomare, Daniel C. Adelsberg, Iden A. Sapse, Florian Krammer, Viviana R. Simon, Ali H. Ellebedy, Goran Bajic · 2026 · eLife
- KmerSignificance Score: A discriminative and biologically-informed framework for viral k-mer prioritizationDylan Lebatteux, F. Corso, Hugo Soudeyns, Isabelle Boucoiran, S. Gantt, A. Diallo · 2026 · bioRxiv
- Evolution of SARS-CoV-2 caused infection in farmed minks: continuous surveillance of an 11-month outbreak at the largest Latvian mink farmŅikita Zrelovs, Edvīns Oļševskis, Jurijs Perevoščikovs, Ivars Silamiķelis, Alise Jakovele, Kristīne Lamberga, Aivars Bērziņš, Monta Brīvība, Jānis Kloviņš · 2026 · Virus Evolution
- Recurrent recombination and insertion–deletion events shape the genome-wide evolutionary history of the Coronaviridae familyLuis Daniel González-Vázquez, David Ferreiro, Filipe Pereira, Miguel Arenas · 2026 · Research Square
- Camelid VHHs as a Versatile Platform for Combating Viral InfectionsMohammed Mufrrih, Thamir A. Alandijany · 2026 · Pharmaceuticals
- Multi-Parameter Genomic Evolution of SARS-CoV-2 Across Ten US States During the Vaccination Era, 2020–2025Som V. Thomas, Jing Chen, Dong Qian, Paul W. Spearman, Donglu Shi · 2026 · Bioengineering
- KmerSignificance score: A discriminative and biologically informed framework for viral k-mer prioritizationDylan Lebatteux, Florian Corso, Hugo Soudeyns, Isabelle Boucoiran, Soren M. Gantt, Abdoulaye Baniré Diallo · 2026 · PLoS Computational Biology