Recurrent deletions in the SARS-CoV-2 spike glycoprotein drive antibody escape

McCarthy, Kevin R., Rennick, Linda J., Nambulli, Sham, Robinson-McCarthy, Lindsey R., Bain, William G., Haidar, Ghady, Duprex, W. Paul·2021·Science
DOI 10.1126/science.abf6950

Cited by (538)

Items 401–500 of 538

  1. Comprehensive deletion scan of anti-CRISPR AcrIIA4 reveals essential and dispensable domains for Cas9 inhibition
    2024
  2. Emerging Mutations Potentially Related to SARS-CoV-2 Immune Escape: The Case of a Long-Term Patient
    Loredana Capozzi, Domenico Simone, Angelica Bianco, Laura Del Sambro, Valeria Rondinone, Lorenzo Pace, Viviana Manzulli, Michela Iacobellis, Antonio Parisi · 2021 · Life
  3. Immunological Facet and Inception after Post-COVID-19 Vaccination
    Suman Kumar Ray, Sukhes Mukherjee · 2023 · Infectious Disorders - Drug Targets
  4. The Lambda Variant in Argentina: Analyzing the Evolution and Spread of SARS-CoV-2 Lineage C.37
    Mercedes Soledad Nabaes Jodar, Carolina Torres, Laura Noelia Mojsiejczuk, Dolores Acuña, Laura Elena Valinotto, Stephanie Goya, Mónica Inés Natale, Silvina Beatriz Lusso, Sofía Alexay, Ariel Amadío et al. · 2023 · Viruses
  5. Unraveling the structural and functional dimensions of SARS-CoV2 proteins in the context of COVID-19 pathogenesis and therapeutics
    Aniruddh Jhanwar, Dipika Sharma, Uddipan Das · 2024 · International Journal of Biological Macromolecules
  6. COVID-19 variants that escape vaccine immunity: Global and Indian context—are more vaccines needed?
    Bijayeeta Deb, Ramya Vilvadrinath, Suchi Goel · 2021 · Journal of Biosciences
  7. Continuous genomic diversification of long polynucleotide fragments drives the emergence of new SARS-CoV-2 variants of concern
    Karthik Murugadoss, Michiel J.M. Niesen, Bharathwaj Raghunathan, Patrick J. Lenehan, Pritha Ghosh, Tyler Feener, Praveen Anand, Safak Simsek, Rohit Suratekar, Travis K. Hughes et al. · 2022 · PNAS Nexus
  8. SARS-CoV-2 genome variations and evolution patterns in Egypt: a multi-center study
    Deena Jalal, Mariam G. Elzayat, Hend E. El-Shqanqery, Aya A. Diab, Abdelrahman Yahia, Omar Samir, Usama Bakry, Khaled Amer, Mostafa ElNaqeeb, Wael A. Hassan et al. · 2022 · Scientific Reports
  9. Expanding repertoire of SARS-CoV-2 deletion mutations contributes to evolution of highly transmissible variants
    AJ Venkatakrishnan, Praveen Anand, Patrick J. Lenehan, Pritha Ghosh, Rohit Suratekar, Eli Silvert, Colin Pawlowski, Abhishek Siroha, Dibyendu Roy Chowdhury, John Charles O’Horo et al. · 2023 · Scientific Reports
  10. SARS-CoV-2 shedding, infectivity, and evolution in an immunocompromised adult patient
    Maria Cássia Mendes-Corrêa, Fábio Ghilardi, Matias Chiarastelli Salomão, Lucy Santos Villas-Boas, Anderson Vicente de Paula, Tânia Regina Tozetto‐Mendoza, Wilton Santos Freire, Flavia Cristina da Silva Sales, Camila Malta Romano, Ingra Morales Claro et al. · 2024 · Revista do Instituto de Medicina Tropical de São Paulo
  11. SARS-CoV-2 Pandemic Tracing in Italy Highlights Lineages with Mutational Burden in Growing Subsets
    Angelo Sabato Boccia, Rossella Tufano, Veronica Ferrucci, Leandra Sepe, Martina Bianchi, Stefano Pascarella, Massimo Zollo, Giovanni Paolella · 2022 · International Journal of Molecular Sciences
  12. Identification of ACE2 modifiers by CRISPR screening
    Emily J. Sherman, Carmen Mirabelli, Vi T. Tang, Taslima Gani Khan, Andrew A. Kennedy, Sarah E. Graham, Cristen J. Willer, Andrew W. Tai, Jonathan Z. Sexton, Christiane E. Wobus et al. · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
  13. Impact of New Variants on SAR-CoV-2 Infectivity and Neutralization: A Molecular Assessment of the Alterations in the Spike-Host Protein Interactions
    Mary Hongying Cheng, James Krieger, Yufei Xiang, Burak Kaynak, Yi Shi, Moshe Arditi, İvet Bahar · 2021 · SSRN Electronic Journal
  14. Consulting the Oracle of SARS-CoV-2 Infection
    J. Lemieux, J. Luban · 2021 · Journal of Infectious Diseases
  15. Human neutralizing antibodies to cold linear epitopes and to subdomain 1 of SARS-CoV-2
    Filippo Bianchini, Virginia Crivelli, Morgan E. Abernathy, Concetta Guerra, Martin Palus, Jonathan Muri, Harold Marcotte, Antonio Piralla, Mattia Pedotti, Raoul De Gasparo et al. · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
  16. Highly infectious, less pathogenic and antibody resistant Omicron XBB.1, XBB.1.5 and XBB.1.5.1-XBB.1.5.39 subvariant Coronaviruses do not produce ORF8 protein due to 8th codon GGA=TGA Termination Codon Mutation
    Asit Kumar Chakraborty · 2023 · Research Square
  17. A highly divergent SARS-CoV-2 lineage B.1.1 sample in a patient with long-term COVID-19
    Elena Nabieva, Andrey B. Komissarov, Galya V. Klink, Stanislav V. Zaitsev, Maria V. Sergeeva, Artem V. Fadeev, Комиссарова Ксения Сергеевна, Anna A. Ivanova, Maria Pisareva, Kira Kudrya et al. · 2023 · medRxiv
  18. Differential severity of SARS-CoV-2 variant infections in children and adults with COVID-19
    Noah Brazer, Venice Servellita, Chengshi Jin, Abiodun Foresythe, Miriam Oseguera, Jenny Nguyen, Nanami Sumimoto, Hee Jae Huh, Andries Feder, Sanchita Bhattacharya et al. · 2025 · Journal of Clinical Virology
  19. The glycosylation variant at residue 381 of the spike protein contributes to virulence shifts in porcine epidemic diarrhea virus during both natural field transmission and laboratory cell passaging with poor cross-protection
    Zhiwei Li, Zhiqian Ma, Yongqi Li, Xiaojing Zhao, Yong‐Hui Zheng, Yang Li, Yingtong Feng, Xuyang Guo, Zifang Zheng, Lele Xu et al. · 2025 · Journal of Virology
  20. Vacunas contra la COVID-19 y aparición de variantes del SARS-CoV-2. Reflexionando sobre el caso de México
    José Alberto Dí­az-Quiñónez · 2021 · Gaceta Médica de México
  21. Focus on Marine Animal Safety and Marine Bioresources in Response to the SARS-CoV-2 Crisis
    Yaowen Yang, Jiacheng Li, Fang Han · 2022 · International Journal of Molecular Sciences
  22. The effect of anxiety due to coronavirus outbreak on job adjustment and change management in public libraries
    Ali Biranvand, Somayeh Sadat Sadati Firoozabadi, Hassan Khodravan · 2022 · Research on Information Science and Public Libraries
  23. Dynamic expedition of leading mutations in SARS-CoV-2 spike glycoproteins
    Hasan, Muhammad, He, Zhouyi, Jia, Mengqi, Leung, Alvin C.F., Natarajan, Kathiresan, Xu, Wentao, Yap, Shanqi, Zhou, Feng, Chen, Shihong, Su, Hailei et al. · 2024 · Computational and Structural Biotechnology Journal
  24. Hidden evolutionary constraints dictate the retention of coronavirus accessory genes
    Stephen A. Goldstein, Teagan M. Feeley, Kristina M. Babler, Zoë A. Hilbert, Diane Miller Downhour, Niema Moshiri, Nels C. Elde · 2024 · Current Biology
  25. Emergence of Omicron FN.1 a descendent of BQ.1.1 in Botswana
    Wonderful Tatenda Choga, Emanuele Gustani‐Buss, Houriiyah Tegally, Dorcas Maruapula, Xiaoyu Yu, Monika Moir, Boitumelo J. L. Zuze, James Emmanuel San, Nokuthula S Ndlovu, Kedumetse Seru et al. · 2024 · Virus Evolution
  26. Epidemiological features, genomic characteristics, and origin tracing of the COVID‐19 outbreaks in Beijing from January to September 2022
    Zhaomin Feng, Da Huo, Shujuan Cui, Bing Lyu, Zhichao Liang, Fu Li, Peng Yang, Quanyi Wang, Daitao Zhang, Yang Pan et al. · 2023 · Journal of Medical Virology
  27. Identifying featured indels associated with SARS-CoV-2 fitness
    Xiang Li, Hong-Liang Yan, Gary Wong, Wanli Ouyang, Jie Cui · 2023 · Microbiology Spectrum
  28. S-Gene Target Failure as an Effective Tool for Tracking the Emergence of Dominant SARS-CoV-2 Variants in Switzerland and Liechtenstein, Including Alpha, Delta, and Omicron BA.1, BA.2, and BA.4/BA.5
    Dominique Hilti, Faina Wehrli, Sabine Berchtold, Susanna Bigler, Thomas Bodmer, Helena M. B. Seth-Smith, Tim C. Roloff, Philipp P. Kohler, Christian R. Kahlert, Laurent Kaiser et al. · 2024 · Microorganisms
  29. Laboratory Action Plan for Emerging SARS-CoV-2 Variants
    Laura Filkins, Jeffrey A. SoRelle, John W. Schoggins, Jason Y. Park · 2021 · Clinical Chemistry
  30. SAS: A Platform of Spike Antigenicity for SARS-CoV-2
    Lu Zhang, Ruifang Cao, Tiantian Mao, Yuan Wang, Daqing Lv, Liangfu Yang, Yuanyuan Tang, Mengdi Zhou, Yunchao Ling, Guoqing Zhang et al. · 2021 · Frontiers in Cell and Developmental Biology
  31. Evaluation of Analytical and Clinical Performance and Usefulness in a Real-Life Hospital Setting of Two in-House Real-Time RT-PCR Assays to Track SARS-CoV-2 Variants of Concern
    Alice Moisan, Anaïs Soares, Fabienne De Oliveira, Élodie Alessandri-Gradt, François Lecoquierre, Steeve Fourneaux, Jean‐Christophe Plantier, Marie Gueudin · 2023 · Viruses
  32. Use of compressed sensing to expedite high-throughput diagnostic testing for COVID-19 and beyond
    Kody A. Waldstein, Jirong Yi, Myung Cho, Raghuraman Mudumbai, Xiaodong Wu, Steven M. Varga, Weiyu Xu · 2022 · PLoS Computational Biology
  33. Variations in spike gene of SARS-CoV-2 isolated in Vietnam
    Quan Ke Thai, Phuoc Huynh, Duc Diana Le · 2022 · International Journal of Biosciences (IJB)
  34. Targeting Spike Glycans to Inhibit SARS-CoV2 Viral Entry
    Alex J. Guseman, Linda J. Rennick, Sham Nambulli, Chandra Nath Roy, David R. Martinez, Darian T. Yang, Fatema Bhinderwhala, Sandra Viviana Vergara, Ralph Steven Baric, Zandrea Ambrose et al. · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
  35. The potential impact of the spreading of highly transmissible Omicron variant XBB.1.5 and JN.1 on the evolution of SARS-CoV-2
    Buqing Yi · 2024 · medRxiv
  36. A highly divergent sample from a nearly extinct SARS-CoV-2 lineage in a patient with long-term COVID-19
    Elena Nabieva, Galya V. Klink, Andrey B. Komissarov, Stanislav V. Zaitsev, Maria V. Sergeeva, Artem V. Fadeev, Комиссарова Ксения Сергеевна, Anna A. Ivanova, Maria Pisareva, Kira Kudrya et al. · 2025 · Frontiers in Cellular and Infection Microbiology
  37. Local Emergence of a del HV69-70 SARS-CoV-2 Variant in Burgundy, France
    H. Giraudon, Mohand Djemai, Christelle Auvray, Alexis de Rougemont, Gaël Belliot, Jean‐Baptiste Bour, Catherine Manoha · 2022 · Pathogens
  38. SARS-CoV-2 Variants: Impact of Spike Mutations on Vaccine and Therapeutic Strategies
    Renuka Raman, Krishna J. Patel, Kishu Ranjan · 2022 · Springer eBooks
  39. Rapidly Evolving SARS-CoV-2: A Brief Review Regarding the Variants and their Effects on Vaccine Efficacies
    Shahid Nawaz, Sara Janiad, Aiman Fatima, Maira Saleem, Urooj Fatima, Asad Ali · 2024 · Infectious Disorders - Drug Targets
  40. Clinico-Virological Outcomes and Mutational Profile of SARS-CoV-2 in Adults Treated with Ribavirin Aerosol for COVID-19 Pneumonia
    Giulia Morsica, Emanuela Messina, Sabrina Bagaglio, Laura Galli, Riccardo Lolatto, Michela Sampaolo, Maxime Barakat, Robert J. Israel, Antonella Castagna, Nicola Clementi · 2024 · Microorganisms
  41. Lessons from COVID‐19: Aspects of prevention, therapeutics, and diagnostics against SARS‐CoV‐2 with special focus on JN.1 and XBB sublineages
    Puja Jaishwal, Upagya Gyaneshwari, Kisalay Jha, Brijesh Pandey, Thakur Prasad Yadav, Satarudra Prakash Singh · 2024 · MedComm – Future Medicine
  42. Emergence of the BA.2.87.1 lineage of SARS-CoV-2 in South Africa, a highly diverged BA.2-related lineage
    Dikeledi Kekana, Buhle Ntozini, Ryan Hisner, Mukhlid Yousif, Phindile Ntuli, Nkosenhle Ndlovu, Kerrigan McCarthy, Anele Mnguni, Boitshoko Mahlangu, Ayanda Nzimande et al. · 2025 · Virus Evolution
  43. Probiotics mediated control and immunomodulation of SARS-CoV-2 associated pathological conditions
    P. Saravana Kumari, V. Viswapriya, M. Lydia Rajakumari, S. Murugan · 2021 · Annals of Phytomedicine An International Journal
  44. Immunoediting in SARS-CoV-2: Mutual relationship between the virus and the host
    N. Kheshtchin, P. Bakhshi, S. Arab, M. Nourizadeh · 2022 · International Immunopharmacology
  45. Current strategies for SARS-CoV-2 molecular detection
    Lei Xie, Junlin Li, Ying Ai, Haolan He, Xiuyun Chen, Mingyu Yin, Wanxi Li, Wenguan Huang, Minyi Luo, Jinyang He · 2022 · Analytical Methods
  46. Tracking of Mutational Signature of SARS-CoV-2 Omicron on Distinct Continents and Little Difference was Found
    Shu-Yue Zheng, Yunpeng Zhang, Yuxin Liu, Wei Zhao, Xiang-Lei Peng, Yan-Peng Zheng, Yuan-Hui Fu, Jie‐mei Yu, Jinsheng He · 2023 · Viruses
  47. Whole Sequencing and Detailed Analysis of SARS-CoV-2 Genomes in Southeast Spain: Identification of Recurrent Mutations in the 20E (EU1) Variant with Some Clinical Implications
    María José López-Andreo, María Rosario Vicente-Romero, Enrique Bernal, INMACULADA NAVARRO-GONZÁLEZ, Francisco Salazar-Martínez, Vanesa Cánovas-Cánovas, Cristina Gil-Ortuño, María Gema Riquelme-Rocamora, Francisco Solano, Francisco Javier Ibáñez‐López et al. · 2023 · Diseases
  48. Overview of immunological & virological factors driving the evolution & global spread of SARS-CoV-2 variants
    Ranjan Ramasamy · 2023 · International Journal of Microbiology Research
  49. Genome data artifacts and functional studies of deletion repair in the BA.1 SARS-CoV-2 spike protein
    Miguel Álvarez-Herrera, Paula Ruiz-Rodríguez, Beatriz M. Navarro-Domínguez, João Zulaica, Brayan Grau, María Alma Bracho, Manuel Guerreiro, Cristóbal Aguilar-Gallardo, Fernando Gónzález‐Candelas, Iñaki Comas et al. · 2025 · Virus Evolution
  50. Molecular-Genetic Monitoring of SARS-CoV-2 Genovariants in the Territory of the Volga Federal District of the Russian Federation. Communication 1
    Natalya A. Osina, Ya. M. Krasnov, Наталья Гусева, E. G. Bulgakova, I. V. Domanina, A. D. Katyshev, Denis Valer'evich Utkin, O. V. Vinogradova, Nicolai Kudryashov, Tatyana A. Polunina et al. · 2021 · Problems of Particularly Dangerous Infections
  51. Deletion disrupts a conserved antibody epitope in a SARS-CoV-2 variant of concern
    Linda J. Rennick, Lindsey R. Robinson‐McCarthy, Sham Nambulli, William Paul Duprex, Kevin R. McCarthy · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
  52. Phylogenetic network analysis revealed the recombinant origin of the SARS-CoV-2 VOC202012/01 (B.1.1.7) variant first discovered in U.K.
    Xianfa Xie, Teash-Juan Lewis, Nikoli Green, Zhenping Wang · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
  53. Increased frequency of recurrent in-frame deletions in new expanding lineages of SARS CoV-2 reflects immune selective pressure
    Arghavan Alisoltani, Lukasz Jaroszewski, Mallika Iyer, Arash Iranzadeh, Adam Godzik · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
  54. The phylodynamics of SARS-CoV-2 during 2020 in Finland — Disappearance and re-emergence of introduced strains.
    Phuoc Truong Nguyen, Ravi Kant, Frederik Van den Broeck, Maija T. Suvanto, Hussein Alburkat, Jenni M. E. Virtanen, Ella Ahvenainen, Robert S. Castrén, Samuel Leandro Hong, Guy Baele et al. · 2021 · Research Square
  55. Evolutionary dynamics of a virus in a vaccinated population
    Graham Bell · 2021 · medRxiv
  56. Convergent Evolution of A-Lineage (Clade 19B) SARS-CoV-2 Spike Sequences with B-Lineage Variants of Concern Affects Virus Replication in a Temperature-Dependent Manner on Human Nasal Epithelial Cell Cultures
    Steve Yoon, Eddy Anaya, Jaiprasath Sachithanandham, Benjamin A. Pinsky, David J. Sullivan, Heba H. Mostafa, Andrew S Pekosz · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
  57. Structural and functional properties of the SARS-CoV-2 spike protein: Potential vaccine and drug development for COVID-19
    Reed L. Berkowitz, David A. Ostrov · 2025 · Elsevier eBooks
  58. Genetic Variations of Three Kazakhstan Strains of the SARS-CoV-2 Virus
    Bekbolat S. Usserbayev, Kulyaisan T. Sultankulova, Yerbol D. Burashev, Aibarys M. Melisbek, Meirzhan Shirinbekov, Balzhan Sh. Myrzakhmetova, Izat Smekenov, Asankadir Zhunushov, Керимбаев Аслан Амангельдиевич, Sergazy Sh. Nurabayev et al. · 2025 · Viruses
  59. Domestic violence perpetrated against men in Kigamboni Municipality, Tanzania: Evidence from social ecological framework
    Jacqueline Moses Rugalabam, John Jeckoniah, Angela Mcharo Jesse · 2025 · Journal of Criminal Justice
  60. Cross-Neutralization of Distant Coronaviruses Strongly Correlates with Spike S2-Specific Antibodies from Immunocompetent and Immunocompromised Vaccinated SARS-CoV-2-Infected Patients
    S. Patel, Brooke M. Leeman, Patricia J. Botros, Joanna Folta, Dhiman Shahid, Anya I. Rocque, Andrew S. Joyal, Joseph A. Vecchio, Eliza J. Passell, Dessie Tien et al. · 2025 · Vaccines
  61. NTD Remodeling in the SARS-CoV-2 BA.3.2 Variant May Influence Spike Stability and Immune Escape
    Miriana Quaranta, Alessandra Ciccozzi, Francesco Branda, Leonardo Sernicola, Massimo Ciccozzi, Stefano Pascarella, Alessândra Borsetti, Fabio Scarpa · 2026 · Pathogens
  62. SARS-CoV-2 and Emerging Foodborne Pathogens: Intriguing Commonalities and Obvious Differences
    Ahmed Ghamry Abdelhamid, Julia N. Faraone, John Parker Evans, Shan‐Lu Liu, Ahmed E. Yousef · 2022 · Pathogens
  63. Structural Analysis and Epitope Prediction of S2 Domain of SARS-CoV-2, Conservation Analysis Among Major Variants
    Faiqa Noor, Rabia Nawaz, Ammara Ahad, Anum Ajmal, Samyyia Abrar, Muhammad Shahid, Aqsa Sarwar, Aramish Naz, Uqba Mehmood, Muhammad Idrees · 2023 · Viral Immunology
  64. Differences among epitopes recognized by neutralizing antibodies induced by SARS-CoV-2 infection or COVID-19 vaccination
    Shinya Yamamoto, Seiya Yamayoshi, Mutsumi Ito, Yuko Sakai‐Tagawa, Ichiro Nakachi, Rie Baba, S. Kamimoto, Takayuki Ogura, Shigehiro Hagiwara, Hideaki Kato et al. · 2023 · iScience
  65. VIPERA: Viral Intra-Patient Evolution Reporting and Analysis
    Miguel Álvarez-Herrera, Jordi Sevilla, Paula Ruiz-Rodríguez, Andrea Vergara, Jordi Vilà, Pablo Cano-Jiménez, Fernando Gónzález‐Candelas, Iñaki Comas, Mireia Coscollá · 2024 · Virus Evolution
  66. SARS-CoV-2 Variants from Long-Term, Persistently Infected Immunocompromised Patients Have Altered Syncytia Formation, Temperature-Dependent Replication, and Serum Neutralizing Antibody Escape
    Camille Wouters, Jaiprasath Sachithanandham, Elgin Henry Akin, Lisa Pieterse, Amary Fall, Thao Truong, Jennifer Dien Bard, Rebecca Yee, David J. Sullivan, Heba H. Mostafa et al. · 2024 · Viruses
  67. RR:C19 Editorial: Immune Escape and Viral Evolution
    Gina M. Borgo, Yash S. Huilgol, Michael J. Cronce, Stefano Bertozzi · 2021 · Rapid Reviews COVID-19
  68. Critical View on the Importance of Host Defense Strategies on Virus Distribution of Bee Viruses: What Can We Learn from SARS-CoV-2 Variants?
    Niels Piot, Guy J. Smagghe · 2022 · Viruses
  69. Covariance predicts conserved protein residue interactions important for the emergence and continued evolution of SARS-CoV-2 as a human pathogen
    William Paul Robins, John J. Mekalanos · 2022 · PLoS ONE
  70. The Covid Calamity, the Human Life, and the Surviving Hope
    V Nikhra · 2021 · Virology & Immunology Journal
  71. Emergence and spreading of the largest SARS-CoV-2 deletion in the Delta AY.20 lineage from Uruguay
    Yanina Panzera, María Noel Cortinas, Ana Eugenia Marandino, Lucía Calleros, Victoria Bórmida, Natalia Goñi, Claudia Techera, Sofía Grecco, Joaquín Williman, Viviana Ramas et al. · 2022 · Gene Reports
  72. Concerns Raised on Blood Group Determinants in Plasma Membrane Interaction of the SARS-CoV-2
    Klaus Fiedler · 2021 · Preprints.org
  73. Possible influence of anti-vector immunity and SARS-CoV-2 variants on efficacy of ChAdOx1 nCoV-19 vaccine and the proposal of a new pharmacotherapy
    Loris Zamal, Marco Rocchi · 2021
  74. COVID-19 vaccines and appearance of SARS-CoV-2 variants. Reflecting on the case of Mexico
    José Alberto Dí­az-Quiñónez · 2021 · Gaceta Médica de México
  75. Predicting spike protein NTD mutations of SARS-CoV-2 causing immune escape by molecular dynamics simulations
    Liping Zhou, Leyun Wu, Cheng Peng, Yanqing Yang, Yulong Shi, Zhijian Xu, Weiliang Zhu · 2021
  76. Concerns Raised on Blood Group Determinants in Plasma Membrane Interaction of the SARS-CoV-2
    Klaus Fiedler · 2021 · Preprints.org
  77. Individuals with recent prior SARS-CoV-2 infection are at reduced risk of Omicron infection and associated hospitalization
    Mihika Nadig, Michiel J.M. Niesen, Patrick J. Lenehan, Vineet Agarwal, Jason Ross, Sankar Ardhanari, AJ Venkatakrishnan, Venky Soundararajan · 2022 · medRxiv
  78. Evolution of transient RNA structure-RNA polymerase interactions in respiratory RNA virus genomes
    Charlotte Rigby, Kimberly R. Sabsay, Karishma Bisht, Dirk Eggink, Hamid Jalal, Aartjan J.W. te Velthuis · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
  79. Virological and Clinical Outcomes in Adults Treated with Ribavirin Aerosol for COVID-19 Pneumonia
    Emanuela Messina, Giulia Morsica, Sabrina Bagaglio, Laura Galli, Riccardo Lolatto, Michela Sampaolo, Maxime Barakat, Robert Joseph Israel, Antonella Castagna, Nicola Clementi · 2023 · Preprints.org
  80. Cellular-Host Interaction of SARS-CoV-2 Gamma Variant
    Aline Miranda Scovino, Elizabeth Chen Dahab, Israel Diniz-Lima, Etiele de Senna Silveira, Shana Priscila Coutinho Barroso, Karina Martins-Cardoso, Dirlei Nico, Célio Geraldo Freire-de-Lima, Leonardo Freire‐de‐Lima, Natalia Valente et al. · 2023 · Preprints.org
  81. Rapid Emergence and Evolution of SARS-CoV-2 Variants in Advanced HIV Infection
    Sung Hee Ko, Pierce E. Radecki, Frida Belinky, Jinal N. Bhiman, Susan T. Meiring, Jackie Kleynhans, Daniel Gyamfi Amoako, Vanessa Guerra Canedo, Margaret Lucas, Dikeledi Kekana et al. · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
  82. Naturally occurring N-terminal mutations in SARS-CoV-2 nsp1 impact innate immune modulation but do not affect virus virulence
    Ruchi Rani, Mohammed Nooruzzaman, Leonardo Cardia Caserta, Diego G. Diel · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
  83. Genomics insights reveal multi-year maintenance of a new Deltacoronavirus infecting Seabirds from the Cagarras Island Archipelago Natural Monument, Brazil
    Yago José Mariz Dias, Alexandre Freitas da Silva, Allan Rodrigues, Fernanda Regis Gomes, Leonardo Corrêa, Paola Cristina Resende, Marilda Mendonça Siqueira, Marina Galvão Bueno, Tatiana Ribeiro, Paula Gabriela Quintana et al. · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
  84. Molecular Evolutionary Characteristics of the 2019 Novel Coronavirus (SARS-CoV-2) Contracted by Tunisian Citizens: Comparison and Relationship to Other Human and Animal Coronaviruses Based on Spike Glycoprotein-Coding Gene Sequences Analysis
    Moncef Boulila · 2021 · International Journal of Coronaviruses
  85. SARS-CoV-2 convergent evolution cannot be reliably inferred from phylogenetic analyses
    Yoon-Seo Jo, Asif U. Tamuri, Greg J. Towers, Richard A. Goldstein · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
  86. High rate of SARS-CoV2 nonsense spike genomes coding for prematurely truncated proteins
    Alessio D'Alessandro · 2021 · arXiv (Cornell University)
  87. New COVID-19 Strain (SARS-Cov-2 VUI 202012/01): Lurking Challenge
    Shivani Singh, Sharique Ahmad, Saeeda Wasim, Silky Rai, Sudarshana Gogoi, Zarina Farheen · 2021 · Cross Current International Journal of Medical and Biosciences
  88. SARS-CoV-2 gained the unique spike protein S1-N-Terminal Domain from the promising pangolins mixing vessel: A novel clue for the pandemic outbreak
    Perumal Arumugam Desingu, K. Nagarajan · 2021 · Research Square
  89. Network analysis outlines strengths and weaknesses of emerging SARS-CoV-2 Spike variants
    Pedro D. Manrique, Sandipan Chakraborty, K. Nguyen, Rachael A. Mansbach, Bette Korber, Sandrasegaram Gnanakaran · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
  90. Comparison of Disease Nature of MERS, SARS-CoV-1, and SARS-CoV-2: A Review
    El Hajj S, Y Sacre, E. K. Barbour, Taha Kumosani, Amr G, W Karameh, Mazen Daher, Farah D · 2021 · Journal of Emerging Diseases and Virology
  91. SARS-CoV-2 on the move: Reviewing Innate vs Acquired for Covid-19
    S. Banerjee · 2021
  92. SARS-CoV-2 Accelerated Clearance Using a Novel Nitric Oxide Nasal Spray (NONS) Treatment
    Monika Tandon, Rahul Kodgule, Keith Moore, Stephen Winchester, Yuan-Po Tu, Chris Miller, Wen Wu, Amol Pendse, Shabbir Rangwala, Shashank Joshi · 2022 · SSRN Electronic Journal
  93. Concerns Raised on Blood Group Determinants in Plasma Membrane Interaction of the SARS-CoV-2
    Klaus Fiedler · 2021 · Preprints.org
  94. Quantifying the immunological distinctiveness of emerging SARS-CoV-2 variants in the context of prior regional herd exposure
    Michiel J.M. Niesen, Karthik Murugadoss, Patrick J. Lenehan, Aron Marchler‐Bauer, Jiyao Wang, Ryan P. Connor, James Rodney Brister, AJ Venkatakrishnan, Venky Soundararajan · 2022 · PNAS Nexus
  95. DVSP: An integrated database of virus spike proteins
    Yuan‐Nong Ye, Liu-Feng Zheng, Xiaoya Zhang, Dingfa Liang, Zhu Zeng · 2022 · Research Square
  96. Rapid and Affordable High Throughput Screening of SARS-CoV-2 Variants Using Denaturing High-Performance Liquid Chromatography Analysis
    María Elena Turba, Domenico Mion, Stavros Papadimitriou, Francesca Taddei, Giorgio Dirani, Vittorio Sambri, Fabio Gentilini · 2022 · Frontiers in Virology
  97. Research Progress of SARS-CoV-2 Omicron Variant
    Kang-Hong Wang · 2022 · Advances in microbiology
  98. Genomic Diversification of Long Polynucleotide Fragments Is a Signature of Emerging SARS-CoV-2 Variants of Concern
    Karthik Murugadoss, Michiel Neisen, Bharathwaj Raghunathan, Patrick J. Lenehan, Pritha Ghosh, Tyler Feener, Praveen Anand, Şafak Şimşek, Rohit Suratekar, Travis Hughes et al. · 2021 · SSRN Electronic Journal
  99. Current knowledge of genetics of COVID-19
    Александр Сергеевич Голота, Dmitry A. Vologzhanin, Тatyana A. Kamilova, Stanislav Makarenko, Sergey G. Sсherbak · 2021 · Vestnik of Saint Petersburg University Medicine
  100. Sanger Sequencing for Molecular Diagnosis of SARS-CoV-2 Omicron Subvariants and Its Challenges
    Sin Hang Lee · 2022 · Journal of Biosciences and Medicines