Cited by 236Studies on Chitinases and ChitosanasesVibrio bacteria research studiesMicrobial Community Ecology and Physiology

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Conservation of the Chitin Utilization Pathway in the Vibrionaceae

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Hunt, Dana E., Gevers, Dirk, Vahora, Nisha M., Polz, Martin F.·2008·Applied and Environmental Microbiology

DOI 10.1128/aem.01412-07PMC PMC2223224

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Abstract

Vibrionaceae are regarded as important marine chitin degraders, and attachment to chitin regulates important biological functions; yet, the degree of chitin pathway conservation in Vibrionaceae is unknown. Here, a core chitin degradation pathway is proposed based on comparison of 19 Vibrio and Photobacterium genomes with a detailed metabolic map assembled for V. cholerae from published biochemical, genomic, and transcriptomic results. Further, to assess whether chitin degradation is a conserved property of Vibrionaceae, a set of 54 strains from 32 taxa were tested for the ability to grow on various forms of chitin. All strains grew on N-acetylglucosamine (GlcNAc), the monomer of chitin. The majority of isolates grew on alpha (crab shell) and beta (squid pen) chitin and contained chitinase A (chiA) genes. chiA sequencing and phylogenetic analysis suggest that this gene is a good indicator of chitin metabolism but appears subject to horizontal gene transfer and duplication. Overall, chitin metabolism appears to be a core function of Vibrionaceae, but individual pathway components exhibit dynamic evolutionary histories.

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Authors: Hunt, D. E., Gevers, D., Vahora, N. M., & Polz, M. F.
Affiliations: Massachusetts Institute of Technology (US)
Ghent University (BE)
Corresponding author: Polz, Martin F.
ORCID: Hunt, Dana E.
Gevers, Dirk
Polz, Martin F.
Venue: Applied and Environmental Microbiology
Publisher: American Society for Microbiology
Published: 2008-01
Volume: 74
Issue: 1
Pages: 44-51
ISSN: 0099-2240 (ISSN-L)
1098-5336
DOI: 10.1128/aem.01412-07
PMC: PMC2223224
OpenAlex: W2096419043
Cited by: 236
References: 46
Citations by year: 2026: 14 · 2025: 8 · 2024: 12 · 2023: 23 · 2022: 12 · 2021: 15 · 2020: 14 · 2019: 11 · 2018: 19 · 2017: 10 · 2016: 14 · 2015: 19 · 2014: 9 · 2013: 12 · 2012: 8
FWCI: 3.18
Type: journal article
Language: en
Open access: bronze
doi.org
Licence: journals.asm.org/non-commercial-tdm-license (tdm)
Locations: Applied and Environmental Microbiology (publishedVersion)
Flanders Marine Institute (Flanders Marine Institute) (publishedVersion, other-oa)
Europe PMC (PubMed Central) (publishedVersion)
PubMed Central (publishedVersion)
PubMed (publishedVersion)
Ghent University Academic Bibliography (Ghent University) (submittedVersion, other-oa)
Funders: National Science Foundation
U.S. Department of Energy (DEFG0208ER64516)
Gordon and Betty Moore Foundation
Vlaamse regering
National Institute of Environmental Health Sciences
Topics: Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Studies on Chitinases and Chitosanases
Life Sciences › Immunology and Microbiology › Microbiology › Vibrio bacteria research studies
Physical Sciences › Environmental Science › Ecology › Microbial Community Ecology and Physiology
Keywords: chitin degradation, Vibrionaceae, chitinase A, chiA gene, Vibrio, Photobacterium, horizontal gene transfer, gene duplication, marine bacteria
MeSH terms: Acetylglucosamine, Bacterial Proteins, Chitin, Chitinases, DNA, Bacterial, Molecular Sequence Data, Phylogeny, Vibrionaceae, Conserved Sequence, Sequence Analysis, DNA, Metabolic Networks and Pathways

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Conservation of the Chitin Utilization Pathway in the Vibrionaceae

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