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Quantification of Bacterial Groups within Human Fecal Flora by Oligonucleotide Probe Hybridization
Open accessAbstract
To investigate the population structure of the predominant phylogenetic groups within the human adult fecal microbiota, a new oligonucleotide probe designated S-G-Clept-1240-a-A-18 was designed, validated, and used with a set of five 16S rRNA-targeted oligonucleotide probes. Application of the six probes to fecal samples from 27 human adults showed additivity of 70% of the total 16S rRNA detected by the bacterial domain probe. The Bacteroides group-specific probe accounted for 37% ± 16% of the total rRNA, while the enteric group probe accounted for less than 1%. Clostridium leptum subgroup and Clostridium coccoides group-specific probes accounted for 16% ± 7% and 14% ± 6%, respectively, while Bifidobacterium and Lactobacillus groups made up less than 2%.
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Citations
Cited by
Gut flora in health and disease
Guarner, F., & Malagelada, J.-R. (2003) · The Lancet · doi:10.1016/s0140-6736(03)12489-0 · Cited by 3,365
The impact of diet and lifestyle on gut microbiota and human health
Conlon, M., & Bird, A. (2014) · Nutrients · doi:10.3390/nu7010017 · Cited by 1,567
Ott, S. J., Musfeldt, M., Wenderoth, D. F., Hampe, J., Brant, O., Fölsch, U. R., Timmis, K. N., & Schreiber, S. (2004) · Gut · doi:10.1136/gut.2003.025403 · Cited by 1,311
Mueller, S., Saunier, K., Hanisch, C., Norin, E., Alm, L., Midtvedt, T., Cresci, A., Silvi, S., Orpianesi, C., Verdenelli, M. C., et al. (2006) · Applied and Environmental Microbiology · doi:10.1128/aem.72.2.1027-1033.2006 · Cited by 1,006
Self-citationGenes and Molecules of Lactobacilli Supporting Probiotic Action
Lebeer, S., Vanderleyden, J., & De Keersmaecker, S. C. J. (2008) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.00017-08 · Cited by 1,013
Metadata
- Authors
- Sghir, A., Gramet, G., Suau, A., Rochet, V., Pochart, P., & Dore, J.
- Venue
- Applied and Environmental Microbiology
- Publisher
- American Society for Microbiology
- Published
- 2000-05
- Volume
- 66
- Issue
- 5
- Pages
- 2263-2266
- ISSN
- 0099-2240 (ISSN-L)
- 1098-5336
- OpenAlex
- W2088284295
- Cited by
- 521
- References
- 0
- FWCI
- 7.66
- Type
- journal article
- Language
- en
- Open access
- green
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- Sghir, A., Gramet, G., Suau, A., Rochet, V., Pochart, P., & Dore, J. (2000). Quantification of Bacterial Groups within Human Fecal Flora by Oligonucleotide Probe Hybridization. Applied and Environmental Microbiology. https://doi.org/10.1128/aem.66.5.2263-2266.2000
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