The DOI matches its Crossref record.
Analysis of Genetic Elements Controlling Staphylococcus aureus lrgAB Expression: Potential Role of DNA Topology in SarA Regulation
Abstract
Penicillin-induced killing and murein hydrolase activity in Staphylococcus aureus are dependent on a variety of regulatory elements, including the LytSR two-component regulatory system and the virulence factor regulators Agr and Sar. The LytSR effects on these processes can be explained, in part, by the recent finding that a LytSR-regulated operon, designated lrgAB, affects murein hydrolase activity and penicillin tolerance. To examine the regulation of lrgAB expression in greater detail, we performed Northern blot and promoter fusion analyses. Both methods revealed that Agr and Sar, like LytSR, positively regulate lrgAB expression. A mutation in the agr locus reduced lrgAB expression approximately sixfold, while the sar mutation reduced lrgAB expression to undetectable levels.cis-acting regulatory elements involved in lrgAB expression were identified by fusing various fragments of the lrgAB promoter region to the xylE reporter gene and integrating these constructs into the chromosome. Catechol 2,3-dioxygenase assays identified DNA sequences, including an inverted repeat and intrinsic bend sites, that contribute to maximal lrgAB expression. Confirmation of the importance of the inverted repeat was achieved by demonstrating that multiple copies of the inverted repeat reduced lrgAB promoter activity, presumably by titrating out a positive regulatory factor. The results of this study demonstrate that lrgAB expression responds to a variety of positive regulatory factors and suggest that specific DNA topology requirements are important for optimal expression.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In the citing paper
“Mutations in the agr locus reduce lrgAB expression by approximately sixfold”
From A Review of Biofilm Formation of Staphylococcus aureus and Its Regulation Mechanism (2022) · cites this paper as [156]
In the citing paper
“Agr and SarA, like LytSR, are positively regulating lrgAB expression.”
From A Review of Biofilm Formation of Staphylococcus aureus and Its Regulation Mechanism (2022) · cites this paper as [156]
In the citing paper
“whereas mutations in the sarA reduce lrgAB expression to undetectable levels [156].”
From A Review of Biofilm Formation of Staphylococcus aureus and Its Regulation Mechanism (2022) · cites this paper as [156]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
No references could be resolved yet.
Research works printed but not linked: 36
- Bayles K. W. The bactericidal action of penicillin: new clues to an unsolved mystery.Trends Microbiol.82000280283 · DOI
- Blevins J. S. Gillaspy A. F. Rechtin T. M. Hurlburt B. K. Smeltzer M. S. The Staphylococcal accessory regulator (sar) represses transcription of the Staphylococcus aureus collagen adhesin gene (cna) in an agr-independent manner.Mol. Microbiol.331999317326 · DOI
- 10.1128/jb.178.3.611-618.1996 · DOI · Paper page
- 10.1128/jb.178.19.5810-5812.1996 · DOI
- Chen B. Przybyla A. E. An efficient site-directed mutagenesis method based on PCR.BioTechniques171994657659
- 10.1128/aem.46.1.283-285.1983 · DOI
- 10.1128/JB.180.14.3724-3726.1998 · DOI
- Gabrielian A. Vlahovicek K. Pongor S. Distribution of sequence-dependent curvature in genomic DNA sequences.FEBS Lett.40619976974 · doi:10.1016/s0014-5793(97)00236-6
- Garabedian M. J. LaBaer J. Liu W. Thomas J. R. Analysis of protein-DNA interactions Gene transcription: a practical approach. Hames D. B. Higgins S. J. 1993 243 293 Oxford University Press New York N.Y · doi:10.1093/oso/9780199632923.003.0007
- 10.1128/IAI.66.7.3170-3178.1998 · DOI
- 10.1128/JB.182.7.1794-1801.2000 · DOI · Paper page
- 10.1128/jb.175.24.7875-7879.1993 · DOI
- Holtje J.-V. Tuomanen E. I. The murein hydrolases of Escherichia coli: properties, functions and impact on the course of infections in vivo.J. Gen. Microbiol.1371991441454 · DOI · Paper page
- Inoue H. Nojima H. Okayama H. High efficiency transformation of Escherichia coli with plasmids.Gene9619902328 · DOI · Paper page
- Koo H. S. Wu H. M. Crothers D. M. DNA bending at adenine/thymine tracts.Nature3201986501506 · DOI · Paper page
- Kraemer G. R. Iandolo J. J. High-frequency transformation of Staphylococcus aureus by electroporation.Curr. Microbiol.211990373376 · DOI · Paper page
- Lee C. Y. Buranen S. L. Ye Z. Construction of single-copy integration vector for Staphylococcus aureus.Gene1031991101105 · DOI · Paper page
- 10.1128/jb.166.2.385-391.1986 · DOI · Paper page
- Morfeldt E. Tegmark K. Arvidson S. Transcriptional control of the agr-dependent virulence gene regulator, RNAIII, in Staphylococcus aureus.Mol. Microbiol.21199612271237 · DOI · Paper page
- Novick R. P. Pathogenicity factors and their regulation Gram-positive pathogens. Fischetti V. A. Novick R. P. Ferretti J. J. Portnoy D. A. Rood J. I. 2000 392 407 ASM Press Washington D.C.
- 10.1002/j.1460-2075.1993.tb06074.x · DOI · Paper page
- 10.1128/jb.176.17.5525-5529.1994 · doi:10.1128/jb.176.17.5525-5529.1994
- 10.1128/mr.58.2.268-290.1994 · doi:10.1128/mr.58.2.268-290.1994 · Paper page
- 10.1128/jb.163.2.610-614.1985 · doi:10.1128/jb.163.2.610-614.1985
- 10.1128/JB.181.14.4198-4204.1999 · doi:10.1128/jb.181.14.4198-4204.1999
- Saint-Girons I. Fritz H. J. Shaw C. Tillmann E. Starlinger P. Integration specificity of an artificial kanamycin transposon constructed by the in vitro insertion of an internal Tn5 fragment into IS2.Mol. Gen. Genet.18319814550 · doi:10.1007/bf00270136
- Sambrook J. Fritsch E. F. Maniatis T. Molecular cloning: a laboratory manual 2nd ed. 1989 Cold Spring Harbor Laboratory Press Cold Spring Harbor N.Y
- Sanger F. Nicklen S. Coulson A. R. DNA sequencing with chain-terminating inhibitors.Proc. Natl. Acad. Sci. USA74197754635467 · DOI · Paper page
- 10.1128/iai.25.3.902-911.1979 · DOI
- Sheehan B. J. Foster T. J. Dorman C. J. Park S. Stewart G. S. A. B. Osmotic and growth-phase dependent regulation of the eta gene of Staphylococcus aureus: a role for DNA supercoiling.Mol. Gen. Genet.23219924957 · doi:10.1007/bf00299136
- Shockman G. D. Holtje J.-V. Microbial peptidoglycan (murein) hydrolases Bacterial cell wall Ghuysen J.-M. Hakenbeck R. 27 1994 131 166 Elsevier Science B.V. Amsterdam, The Netherlands · DOI · Paper page
- 10.1016/0378-1119(84)90161-6 · DOI · Paper page
- 10.1128/jb.177.4.1094-1097.1995 · DOI
- Tsen H. Levene S. D. Supercoiling-dependent flexibility of adenosine-tract-containing DNA detected by a topological method.Proc. Natl. Acad. Sci. USA94199728172822 · doi:10.1073/pnas.94.7.2817
- Yang Y. Westcott T. P. Pedersen S. C. Tobias I. Olson W. K. Effects of localized bending on DNA supercoiling.Trends Biochem. Sci.201995313319 · doi:10.1016/s0968-0004(00)89058-1
- Zukowski M. M. Gaffney D. F. Speck D. Kauffmann M. Findeli A. Wisecup A. Lecocq J. P. Chromogenic identification of genetic regulatory signals in Bacillus subtilis based on expression of a cloned Pseudomonas gene.Proc. Natl. Acad. Sci. USA80198311011105 · DOI · Paper page
Cited by
Insights into Mechanisms Used by Staphylococcus aureus to Avoid Destruction by Human Neutrophils
Voyich, J. M., Braughton, K. R., Sturdevant, D. E., Whitney, A. R., Saïd-Salim, B., Porcella, S. F., Long, R. D., Dorward, D. W., Gardner, D. J., Kreiswirth, B. N., et al. (2005) · The Journal of Immunology · doi:10.4049/jimmunol.175.6.3907 · Cited by 563
A Review of Biofilm Formation of Staphylococcus aureus and Its Regulation Mechanism
Peng, Q., Tang, X., Dong, W., Sun, N., & Yuan, W. (2022) · Antibiotics · doi:10.3390/antibiotics12010012 · Cited by 440
Regulation of virulence determinants in Staphylococcus aureus: complexity and applications
Bronner, S., Monteil, H., & Prévost, G. (2004) · FEMS Microbiology Reviews · doi:10.1016/j.femsre.2003.09.003 · Cited by 434
Microarray-Based Analysis of the Staphylococcus aureus σBRegulon
Bischoff, M., Dunman, P., Kormanec, J., Macapagal, D., Murphy, E., Mounts, W., Berger-Bächi, B., & Projan, S. (2004) · Journal of Bacteriology · doi:10.1128/jb.186.13.4085-4099.2004 · Cited by 401
Global Transcriptome Analysis of Staphylococcus aureus Response to Hydrogen Peroxide
Chang, W., Small, D. A., Toghrol, F., & Bentley, W. E. (2006) · Journal of Bacteriology · doi:10.1128/jb.188.4.1648-1659.2006 · Cited by 152
Metadata
- Authors
- Fujimoto, D. F., Brunskill, E. W., & Bayles, K. W.
- Affiliations
- <!--label omitted: 1-->Department of Microbiology, Molecular Biology and Biochemistry, University of Idaho, Moscow, Idaho 83844-3052
- Venue
- Journal of Bacteriology
- Publisher
- American Society for Microbiology
- Published
- 2000-09
- Volume
- 182
- Issue
- 17
- Pages
- 4822-4828
- ISSN
- 0021-9193
- 1098-5530
- Cited by
- 35
- References
- 0
- Language
- en
- Licence
- journals.asm.org/non-commercial-tdm-license (tdm)
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
How to cite
Cite CoChat for the checks on this page, and the paper for its own findings.
- This page
- CoChat. (2026). Citation check: Analysis of Genetic Elements Controlling Staphylococcus aureus lrgAB Expression: Potential Role of DNA Topology in SarA Regulation. https://app.cochat.ai/papers/10.1128/jb.182.17.4822-4828.2000
- The paper
- Fujimoto, D. F., Brunskill, E. W., & Bayles, K. W. (2000). Analysis of Genetic Elements Controlling Staphylococcus aureus lrgAB Expression: Potential Role of DNA Topology in SarA Regulation. Journal of Bacteriology. https://doi.org/10.1128/jb.182.17.4822-4828.2000
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.