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Deep-Time Structural Evolution of Retroviral and Filoviral Surface Envelope Proteins
Open accessPublished version of a preprint
Abstract
The structural relationships of SUs of retroviral groups are obscured by the high rate of sequence change of SU and the deep-time divergence of retroviral lineages. Previous data showed no structural or functional relationships between the SUs of type C gammaretroviruses and lentiviruses.
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Cites
Highly accurate protein structure prediction with AlphaFold
Jumper, J., Evans, R., Pritzel, A., Green, T., Figurnov, M., Ronneberger, O., Tunyasuvunakool, K., Bates, R., Žídek, A., Potapenko, A., et al. (2021) · Nature · doi:10.1038/s41586-021-03819-2 · Cited by 43,764
Highly accurate protein structure prediction for the human proteome
Tunyasuvunakool, K., Adler, J., Wu, Z., Green, T., Zielinski, M., Žídek, A., Bridgland, A., Cowie, A., Meyer, C., Laydon, A., et al. (2021) · Nature · doi:10.1038/s41586-021-03828-1 · Cited by 3,025 · cited 1×
“The recent release of AlphaFold 2, a deep-learning-based structural prediction tool that can yield structures of high quality comparable to experimentally determined structures (20, 21), provides an opportunity to address the structural conservation in the SUs of retroviruses more broadly.”
BackgroundStructures and mechanisms of viral membrane fusion proteins: multiple variations on a common theme
White, J. M., Delos, S. E., Brecher, M., & Schornberg, K. (2008) · Critical Reviews in Biochemistry and Molecular Biology · doi:10.1080/10409230802058320 · Cited by 892
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Metadata
- Authors
- Hötzel, I.
- Affiliations
- Genentech (US)
- Corresponding author
- Hötzel, Isidro
- ORCID
- Hötzel, Isidro
- Venue
- Journal of Virology
- Publisher
- American Society for Microbiology
- Published
- 2022-04-13
- Volume
- 96
- Issue
- 7
- Pages
- e0006322-e0006322
- ISSN
- 0022-538X (ISSN-L)
- 1098-5514
- PMC
- PMC9006886
- OpenAlex
- W4221129934
- Cited by
- 9
- References
- 3
- Citations by year
- 2026: 1 · 2025: 1 · 2024: 3 · 2023: 4
- FWCI
- 0.65
- Type
- journal article
- Language
- en
- Open access
- green
- doi.org
- Licence
- Locations
- Journal of Virology (publishedVersion)
- bioRxiv (Cold Spring Harbor Laboratory) (acceptedVersion, cc-by-nc-nd)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Topics
- Life Sciences › Immunology and Microbiology › Virology › HIV Research and Treatment
- Life Sciences › Immunology and Microbiology › Immunology › T-cell and Retrovirus Studies
- Health Sciences › Medicine › Epidemiology › Virology and Viral Diseases
- Keywords
- structural relationships, sequence divergence, lentivirus, protein structure
- MeSH terms
- Humans, Viral Envelope Proteins, Gene Products, env, Endogenous Retroviruses, Ebolavirus
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