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Evidence of Recombination among Enteroviruses
Open accessAbstract
Human enteroviruses consist of more than 60 serotypes, reflecting a wide range of evolutionary divergence. They have been genetically classified into four clusters on the basis of sequence homology in the coding region of the single-stranded RNA genome. To explore further the genetic relationships between human enteroviruses and to characterize the evolutionary mechanisms responsible for variation, previously sequenced genomes were subjected to detailed comparison. Bootstrap and genetic similarity analyses were used to systematically scan the alignments of complete genomic sequences. Bootstrap analysis provided evidence from an early recombination event at the junction of the 5′ noncoding and coding regions of the progenitors of the current clusters. Analysis within the genetic clusters indicated that enterovirus prototype strains include intraspecies recombinants. Recombination breakpoints were detected in all genomic regions except the capsid protein coding region. Our results suggest that recombination is a significant and relatively frequent mechanism in the evolution of enterovirus genomes.
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“Recombination between viral RNA genomes is a well-known phenomenon for enteroviruses [28–31].”
From Recombination between Poliovirus and Coxsackie A Viruses of Species C: A Model of Viral Genetic Plasticity and Emergence (2011) · cites this paper as [30]
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Molecular Detection and Characterization of Human Enteroviruses
Pallansch, M. A., & Oberste, M. S. (2003) · Developments in cardiovascular medicine · doi:10.1007/978-1-4419-9264-2_20 · Cited by 8
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Human Enterovirus 71 Disease: Clinical Features, Epidemiology, Virology, and Management
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Metadata
- Authors
- Santti, J., Hyypiä, T., Kinnunen, L., & Salminen, M.
- Affiliations
- University of Turku (FI)
- <!--label omitted: 1-->MediCity Research Laboratory and Department of Virology, University of Turku, FIN-20520 Turku,1
- <!--label omitted: 3-->Department of Epidemiology and Health Promotion3 and
- <!--label omitted: 4-->HIV Laboratory, Department of Infectious Disease Epidemiology,4National Public Health Institute, FIN-00300 Helsinki, Finland
- Venue
- Journal of Virology
- Publisher
- American Society for Microbiology
- Published
- 1999-10
- Volume
- 73
- Issue
- 10
- Pages
- 8741-8749
- ISSN
- 0022-538X (ISSN-L)
- 1098-5514
- PMC
- PMC112895
- OpenAlex
- W2130710544
- Cited by
- 259
- References
- 44
- Citations by year
- 2026: 6 · 2025: 5 · 2024: 16 · 2023: 2 · 2022: 2 · 2021: 4 · 2020: 5 · 2019: 3 · 2018: 6 · 2017: 5 · 2016: 7 · 2015: 8 · 2014: 16 · 2013: 14 · 2012: 16
- FWCI
- 3.89
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Journal of Virology (publishedVersion)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- STM:n Hallinnonalan avoin julkaisuarkisto (Julkari) (submittedVersion)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Evolution and Genetic Dynamics
- Health Sciences › Medicine › Infectious Diseases › Viral Infections and Immunology Research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Phylogenetic Studies
- Keywords
- human enteroviruses, genetic recombination, viral evolution, enterovirus serotypes, recombination breakpoints, 5' untranslated region, single-stranded RNA genome, capsid protein, genetic groups
- MeSH terms
- Enterovirus, Humans, Recombination, Genetic, Genome, Viral, Evolution, Molecular
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