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Biochemistry of Catabolic Reductive Dehalogenation

Fincker, Maeva, Spormann, Alfred M.·2017·Annual Review of Biochemistry

Abstract

A wide range of phylogenetically diverse microorganisms couple the reductive dehalogenation of organohalides to energy conservation. Key enzymes of such anaerobic catabolic pathways are corrinoid and Fe–S cluster–containing, membrane-associated reductive dehalogenases. These enzymes catalyze the reductive elimination of a halide and constitute the terminal reductases of a short electron transfer chain. Enzymatic and physiological studies revealed the existence of quinone-dependent and quinone-independent reductive dehalogenases that are distinguishable at the amino acid sequence level, implying different modes of energy conservation in the respective microorganisms. In this review, we summarize current knowledge about catabolic reductive dehalogenases and the electron transfer chain they are part of. We review reaction mechanisms and the role of the corrinoid and Fe–S cluster cofactors and discuss physiological implications.

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Research works printed but not linked: 127

  1. 10.1007/b10446 · DOI
  2. 10.1016/S0045-6535(03)00207-8 · DOI
  3. 10.1016/S0045-6535(03)00211-X · DOI
  4. 10.1006/enfo.2000.0011 · DOI
  5. Grindstaff M, 1998, Bioremediation of Chlorinated Solvent Contaminated Groundwater
  6. 10.1021/es990234m · DOI
  7. 10.1007/978-3-662-49875-0_3 · DOI
  8. 10.1111/j.1574-6941.2006.00115.x · DOI
  9. 10.1007/978-3-662-49875-0_12 · DOI · Paper page
  10. 10.1128/AEM.02748-06 · DOI
  11. 10.1128/AEM.02037-08 · DOI
  12. 10.1016/S0014-5793(98)01114-4 · DOI
  13. 10.1007/BF00262203 · DOI
  14. 10.1128/AEM.72.4.2775-2782.2006 · DOI
  15. 10.1007/BF00249173 · DOI
  16. Boyle AW, 1999, Appl. Environ. Microbiol., 65, 1133, 10.1128/AEM.65.3.1133-1140.1999 · DOI
  17. 10.1098/rstb.2012.0326 · DOI · Paper page
  18. 10.1016/j.biortech.2012.10.051 · DOI
  19. 10.1128/AEM.68.2.893-900.2002 · DOI
  20. Löffler FE, 2013, Int. J. Syst. Evol. Microbiol., 63, 625, 10.1099/ijs.0.034926-0 · DOI
  21. 10.1099/ijs.0.011502-0 · DOI
  22. 10.1007/s002030050577 · DOI
  23. 10.1128/jb.177.17.5135-5139.1995 · DOI
  24. 10.1128/AEM.66.12.5141-5147.2000 · DOI
  25. 10.1098/rstb.2012.0325 · DOI
  26. 10.1128/AEM.70.8.4880-4888.2004 · DOI · Paper page
  27. 10.1128/JB.182.20.5683-5691.2000 · DOI
  28. 10.1007/s00253-009-1958-z · DOI
  29. 10.1128/JB.188.7.2604-2613.2006 · DOI
  30. 10.1099/mic.0.050880-0 · DOI
  31. 10.1098/rstb.2012.0322 · DOI · Paper page
  32. 10.1002/tcr.20134 · DOI
  33. 10.1128/AEM.02927-13 · DOI
  34. 10.1074/jbc.271.28.16515 · DOI · Paper page
  35. 10.1074/jbc.274.29.20287 · DOI
  36. 10.1128/AEM.69.8.4628-4638.2003 · DOI
  37. 10.1016/j.tibtech.2015.07.004 · DOI · Paper page
  38. 10.1146/annurev.biochem.72.121801.161828 · DOI
  39. Kräutler B, 2008, Vitamin B12 and B12-Proteins
  40. 10.1021/ja960363s · DOI
  41. 10.1073/pnas.1018636108 · DOI
  42. 10.1074/jbc.M115.685693 · DOI
  43. 10.1021/es00016a017 · DOI
  44. 10.1021/bi00437a057 · DOI
  45. 10.1111/mmi.12332 · DOI
  46. 10.1126/science.1258118 · DOI · Paper page
  47. 10.1038/nature13901 · DOI
  48. 10.1021/ja511653d · DOI
  49. 10.1016/S0014-5793(97)00520-6 · DOI
  50. 10.1002/hlca.200390313 · DOI · Paper page
  51. 10.1074/jbc.M106217200 · DOI
  52. 10.1021/es970959v · DOI
  53. 10.1021/ja029692c · DOI
  54. 10.1021/ar00091a001 · DOI
  55. 10.1021/bi00457a005 · DOI
  56. 10.1021/ja042142p · DOI
  57. 10.1021/ja048573p · DOI
  58. 10.1021/ja0055965 · DOI
  59. 10.1111/j.1462-2920.2009.02093.x · DOI
  60. 10.1021/es071026u · DOI
  61. 10.1021/acs.est.5b00303 · DOI
  62. 10.1128/AEM.66.12.5141-5147.2000 · DOI
  63. 10.1128/JB.184.13.3419-3425.2002 · DOI
  64. 10.1007/s002030100316 · DOI
  65. 10.1098/rstb.2012.0318 · DOI
  66. 10.1111/1462-2920.13287 · DOI
  67. 10.1128/AEM.70.8.4532-4537.2004 · DOI
  68. 10.1128/AEM.01649-07 · DOI
  69. 10.1128/mBio.00990-16 · DOI · Paper page
  70. Magnuson JK, 1998, Appl. Environ. Microbiol., 64, 1270, 10.1128/AEM.64.4.1270-1275.1998 · DOI
  71. 10.1007/s002030050602 · DOI
  72. 10.1128/AEM.70.10.6347-6351.2004 · DOI
  73. 10.1128/AEM.02017-15 · DOI
  74. 10.1128/AEM.00881-14 · DOI
  75. 10.1146/annurev.micro.50.1.137 · DOI
  76. 10.1007/s00253-001-0902-7 · DOI
  77. 10.1128/AEM.02150-12 · DOI
  78. 10.1098/rstb.2012.0320 · DOI
  79. 10.1111/1462-2920.12500 · DOI
  80. 10.1128/JB.188.6.2262-2274.2006 · DOI
  81. 10.1128/AEM.02173-12 · DOI
  82. 10.1128/AEM.01535-12 · DOI
  83. 10.1186/1471-2164-13-200 · DOI
  84. 10.1038/ismej.2015.197 · DOI
  85. 10.3389/fmicb.2014.00751 · DOI
  86. 10.1111/1462-2920.12268 · DOI
  87. 10.1016/j.bbabio.2008.09.008 · DOI
  88. 10.1128/AEM.67.9.3958-3963.2001 · DOI
  89. 10.1128/jb.178.8.2328-2333.1996 · DOI · Paper page
  90. 10.1007/s00203-004-0734-9 · DOI
  91. 10.1128/AEM.02130-14 · DOI
  92. 10.1126/science.1102226 · DOI
  93. 10.1007/s00203-006-0125-5 · DOI
  94. Louie TM, 1999, J. Bacteriol., 181, 40, 10.1128/JB.181.1.40-46.1999 · DOI
  95. 10.1128/JB.02370-14 · DOI
  96. 10.1007/BF01682983 · DOI
  97. 10.1128/JB.186.7.2052-2060.2004 · DOI
  98. 10.1007/s10295-011-1023-7 · DOI
  99. 10.1128/AEM.02471-10 · DOI
  100. 10.1111/1462-2920.12589 · DOI
  101. 10.1098/rstb.2012.0321 · DOI
  102. 10.1128/AEM.71.3.1664-1667.2005 · DOI
  103. 10.1128/AEM.71.12.8426-8433.2005 · DOI
  104. 10.1016/0167-7012(86)90049-7 · DOI
  105. 10.1111/1462-2920.13200 · DOI
  106. 10.1016/j.bbamem.2007.09.002 · DOI
  107. 10.1111/j.1462-2920.2006.01090.x · DOI
  108. 10.1007/s00216-013-7451-7 · DOI
  109. 10.1111/1462-2920.13204 · DOI
  110. 10.1128/JB.02335-14 · DOI
  111. 10.1186/1471-2164-12-287 · DOI
  112. 10.1007/s10532-013-9662-1 · DOI
  113. 10.1128/AEM.01873-12 · DOI
  114. 10.1128/AEM.00215-07 · DOI
  115. 10.1038/ismej.2010.27 · DOI
  116. 10.1128/AEM.01362-10 · DOI
  117. 10.1042/bj20021837 · DOI
  118. 10.1111/j.1462-2920.2004.00671.x · DOI
  119. 10.1007/s00253-005-0022-x · DOI
  120. 10.1371/journal.pone.0119507 · DOI
  121. 10.1128/AEM.02312-13 · DOI
  122. 10.1271/bbb.100027 · DOI
  123. 10.1093/molbev/msw054 · DOI
  124. 10.3389/fmicb.2013.00341 · DOI
  125. 10.1128/AEM.01124-09 · DOI
  126. 10.1111/j.1462-2920.2005.00830.x · DOI
  127. 10.1371/journal.pone.0145558 · DOI

Metadata

Authors
Fincker, M., & Spormann, A. M.
Affiliations
Department of Civil and Environmental Engineering and Department of Chemical Engineering, Stanford University, Stanford, California 94305;,
Venue
Annual Review of Biochemistry
Published
2017-06-20
Volume
86
Issue
1
Pages
357-386
ISSN
  • 0066-4154
  • 1545-4509
Cited by
166
References
3
Language
en

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