The DOI matches its Crossref record; 97 of the 97 references it cites were found in a registry or an index.
DNA-Encoded Chemical Libraries: A Selection System Based on Endowing Organic Compounds with Amplifiable Information
Open accessAbstract
The discovery of organic ligands that bind specifically to proteins is a central problem in chemistry, biology, and the biomedical sciences. The encoding of individual organic molecules with distinctive DNA tags, serving as amplifiable identification bar codes, allows the construction and screening of combinatorial libraries of unprecedented size, thus facilitating the discovery of ligands to many different protein targets. Fundamentally, one links powers of genetics and chemical synthesis. After the initial description of DNA-encoded chemical libraries in 1992, several experimental embodiments of the technology have been reduced to practice. This review provides a historical account of important milestones in the development of DNA-encoded chemical libraries, a survey of relevant ongoing research activities, and a glimpse into the future.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
The source backs part of the claim, not all of it — or backs it for a different population, condition or comparison.
In the citing paper
“DNA-encoded libraries (DELs), which have the potential to sample vast chemical space in the span of one or more closely related experiments (>109 compounds) 133 .”
From Targeted protein degradation: expanding the toolbox (2019) · cites this paper as [133]
Experimental — accuracy not yet measuredIn the citing paper
“More recently, DNA-econded chemical libraries have made possible synthesis and testing of millions of compounds165 and many big pharma companies have embraced this approach.”
From QSAR without borders (2020) · cites this paper as [165]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Continuous cultures of fused cells secreting antibody of predefined specificity
Köhler, G., & Milstein, C. (1975) · Nature · doi:10.1038/256495a0 · Cited by 17,200
Smith, G. P. (1985) · Science · doi:10.1126/science.4001944 · Cited by 4,143
Rapid generation of functional human IgG antibodies derived from Fab-on-phage display libraries
Jostock, T., Vanhove, M., Brepoels, E., van Gool, R., Daukandt, M., Wehnert, A., van Hegelsom, R., Dransfield, D., Sexton, D., Devlin, M., et al. (2004) · Journal of Immunological Methods · doi:10.1016/j.jim.2004.03.014 · Cited by 2,572
Phage antibodies: filamentous phage displaying antibody variable domains
McCafferty, J., Griffiths, A. D., Winter, G. P., & Chiswell, D. J. (1990) · Nature · doi:10.1038/348552a0 · Cited by 2,427
Marks, J. D., Hoogenboom, H. R., Bonnert, T. P., McCafferty, J., Griffiths, A. D., & Winter, G. P. (1991) · Journal of Molecular Biology · doi:10.1016/0022-2836(91)90498-u · Cited by 1,605
Sapsford, K. E., Algar, W. R., Berti, L., Gemmill, K. B., Casey, B. J., Oh, E., Stewart, M. H., & Medintz, I. L. (2013) · Chemical Reviews · doi:10.1021/cr300143v · Cited by 1,470
Encoded combinatorial chemistry.
Brenner, S., & Lerner, R. A. (1992) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.89.12.5381 · Cited by 1,014 · cited 1×
“) together with Sidney Brenner postulated that it should be possible to “encode” chemistry with DNA (26).”
BackgroundSelf-citationTwenty years on: the impact of fragments on drug discovery
Erlanson, D. A., Fesik, S. W., Hubbard, R. E., Jahnke, W., & Jhoti, H. (2016) · Nature Reviews Drug Discovery · doi:10.1038/nrd.2016.109 · Cited by 1,000
Isolation of high affinity human antibodies directly from large synthetic repertoires.
Griffiths, A. D., Williams, S. C., Hartley, O., Tomlinson, I. M., Waterhouse, P. M., Crosby, W. L., Kontermann, R. E., Jones, P. T., Low, N. M., & Allison, T. J. (1994) · The EMBO Journal · doi:10.1002/j.1460-2075.1994.tb06626.x · Cited by 962
Winter, G. P., & Milstein, C. (1991) · Nature · doi:10.1038/349293a0 · Cited by 958
Research works printed but not linked: 3
- Stark JL, 2012, Top. Curr. Chem., 326, 1
- Neri D, 2002, Encoded self-assembling chemical libraries
- Li Y, Nat. Chem, 10, 2018
Cited by
Sorted by citations
Computational approaches streamlining drug discovery
Sadybekov, A., & Katritch, V. (2023) · Nature · doi:10.1038/s41586-023-05905-z · Cited by 1,424
Targeted protein degradation: expanding the toolbox
Schapira, M., Calabrese, M. F., Bullock, A. N., & Crews, C. M. (2019) · Nature Reviews Drug Discovery · doi:10.1038/s41573-019-0047-y · Cited by 960
Muratov, E. N., Bajorath, J., Sheridan, R. P., Tetko, I. V., Filimonov, D., Poroikov, V., Oprea, T. I., Baskin, I. I., Varnek, A., Roitberg, A., et al. (2020) · Chemical Society Reviews · doi:10.1039/d0cs00098a · Cited by 913
G protein-coupled receptors: structure- and function-based drug discovery
Yang, D., Zhou, Q., Labroska, V., Qin, S., Darbalaei, S., Wu, Y., Yuliantie, E., Xie, L., Tao, H., Cheng, J., et al. (2021) · Signal Transduction and Targeted Therapy · doi:10.1038/s41392-020-00435-w · Cited by 684
Advances in Targeting ‘Undruggable’ transcription Factors With Small Molecules
Henley, M. J., & Koehler, A. N. (2021) · Nature Reviews Drug Discovery · doi:10.1038/s41573-021-00199-0 · Cited by 409
DNA-Encoded Chemical Libraries: A Comprehensive Review with Succesful Stories and Future Challenges
Gironda-Martínez, A., Donckele, E. J., Samain, F., & Neri, D. (2021) · ACS Pharmacology & Translational Science · doi:10.1021/acsptsci.1c00118 · Cited by 344
Self-citationCyclic peptide drugs approved in the last two decades (2001–2021)
Zhang, H., & Chen, S. (2021) · RSC Chemical Biology · doi:10.1039/d1cb00154j · Cited by 333
RNA Display Methods for the Discovery of Bioactive Macrocycles
Huang, Y., Wiedmann, M. M., & Suga, H. (2018) · Chemical Reviews · doi:10.1021/acs.chemrev.8b00430 · Cited by 320
The RaPID Platform for the Discovery of Pseudo-Natural Macrocyclic Peptides
Goto, Y., & Suga, H. (2021) · Accounts of Chemical Research · doi:10.1021/acs.accounts.1c00391 · Cited by 271
Small-molecule discovery through DNA-encoded libraries
Peterson, A. A., & Liu, D. R. (2023) · Nature Reviews Drug Discovery · doi:10.1038/s41573-023-00713-6 · Cited by 277
Sohrabi, C., Foster, A., & Tavassoli, A. (2020) · Nature Reviews Chemistry · doi:10.1038/s41570-019-0159-2 · Cited by 230
DNA-Encoded Chemistry: Drug Discovery from a Few Good Reactions
Fitzgerald, P. R., & Paegel, B. M. (2020) · Chemical Reviews · doi:10.1021/acs.chemrev.0c00789 · Cited by 230
Recent Advances in Selective and Irreversible Covalent Ligand Development and Validation
Zhang, T., Hatcher, J. M., Teng, M., Gray, N. S., & Kostic, M. (2019) · Cell Chemical Biology · doi:10.1016/j.chembiol.2019.09.012 · Cited by 178
DNA ‐encoded chemical libraries – achievements and remaining challenges
Favalli, N., Bassi, G., Scheuermann, J., & Neri, D. (2018) · FEBS Letters · doi:10.1002/1873-3468.13068 · Cited by 174
Self-citationHou, W., Liu, B., & Xu, H. (2020) · European Journal of Medicinal Chemistry · doi:10.1016/j.ejmech.2020.112081 · Cited by 171
Liu, F., Wang, H., Li, S., Bare, G. A. L., Chen, X., Wang, C., Moses, J. E., Wu, P., & Sharpless, K. B. (2019) · Angewandte Chemie International Edition · doi:10.1002/anie.201902489 · Cited by 166
How We Think about Targeting RNA with Small Molecules
Costales, M. G., Childs‐Disney, J. L., Haniff, H. S., & Disney, M. D. (2020) · Journal of Medicinal Chemistry · doi:10.1021/acs.jmedchem.9b01927 · Cited by 164
The role of reversible and irreversible covalent chemistry in targeted protein degradation
Kiely‐Collins, H., Winter, G. E., & Bernardes, G. J. L. (2021) · Cell chemical biology · doi:10.1016/j.chembiol.2021.03.005 · Cited by 160
Flood, D. T., Asai, S., Zhang, X., Wang, J., Yoon, L., Adams, Z. C., Dillingham, B. C., Sanchez, B. B., Vantourout, J. C., Flanagan, M. E., et al. (2019) · Journal of the American Chemical Society · doi:10.1021/jacs.9b03774 · Cited by 154
Expanding the arsenal of E3 ubiquitin ligases for proximity-induced protein degradation
Kannt, A., & Đikić, I. (2021) · Cell chemical biology · doi:10.1016/j.chembiol.2021.04.007 · Cited by 153
Gambini, L., Baggio, C., Udompholkul, P., Jossart, J. N., Salem, A. F., Perry, J. J. P., & Pellecchia, M. (2019) · Journal of Medicinal Chemistry · doi:10.1021/acs.jmedchem.9b00561 · Cited by 143
Li, P., Terrett, J. A., & Zbieg, J. R. (2020) · ACS Medicinal Chemistry Letters · doi:10.1021/acsmedchemlett.0c00436 · Cited by 145
Kinetically guided radical-based synthesis of C(sp 3 )−C(sp 3 ) linkages on DNA
Wang, J., Lundberg, H., Asai, S., Martín-Acosta, P., Chen, J. S., Brown, S., Farrell, W. P., Dushin, R. G., O’Donnell, C. J., Ratnayake, A. S., et al. (2018) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1806900115 · Cited by 139
Selection of DNA-encoded chemical libraries against endogenous membrane proteins on live cells
Huang, Y., Meng, L. H., Nie, Q., Zhou, Y., Chen, L., Yang, S., Fung, Y. M. E., Li, X., Huang, C., Cao, Y. W., et al. (2020) · Nature Chemistry · doi:10.1038/s41557-020-00605-x · Cited by 136
Selection of DNA-Encoded Libraries to Protein Targets within and on Living Cells
Cai, B., Kim, D., Akhand, S. S., Sun, Y., Cassell, R. J., Alpsoy, A., Dykhuizen, E. C., van Rijn, R. M., Wendt, M. K., & Krusemark, C. J. (2019) · Journal of the American Chemical Society · doi:10.1021/jacs.9b08085 · Cited by 121
Strategies for developing DNA-encoded libraries beyond binding assays
Huang, Y., Li, Y., & Li, X. (2022) · Nature Chemistry · doi:10.1038/s41557-021-00877-x · Cited by 120
Novel Computational Approach to Predict Off-Target Interactions for Small Molecules
Rao, M. S., Gupta, R., Liguori, M. J., Hu, M., Huang, X., Mantena, S. R., Mittelstadt, S. W., Blomme, E. A. G., & Vleet, T. R. V. (2019) · Frontiers in Big Data · doi:10.3389/fdata.2019.00025 · Cited by 125
Xu, H., Ma, F., Wang, N., Hou, W., Xiong, H., Lu, F., Li, J., Wang, S., Ma, P., Yang, G., et al. (2019) · Advanced Science · doi:10.1002/advs.201901551 · Cited by 120
Self-citationDNA-Encoded Dynamic Chemical Library and Its Applications in Ligand Discovery
Zhou, Y., Li, C., Peng, J., Xie, L., Meng, L. H., Li, Q., Zhang, J., Li, X., Li, X., Huang, X., et al. (2018) · Journal of the American Chemical Society · doi:10.1021/jacs.8b09277 · Cited by 110
Recent achievements and current trajectories of diversity-oriented synthesis
Gerry, C. J., & Schreiber, S. L. (2019) · Current Opinion in Chemical Biology · doi:10.1016/j.cbpa.2019.08.008 · Cited by 107
Chemical composition of DNA-encoded libraries, past present and future
Dickson, P., & Kodadek, T. J. (2019) · Organic & Biomolecular Chemistry · doi:10.1039/c9ob00581a · Cited by 101
Strategies for targeting undruggable targets
Zhang, G., Zhang, J., Gao, Y., Li, Y., & Li, Y. (2021) · Expert Opinion on Drug Discovery · doi:10.1080/17460441.2021.1969359 · Cited by 104
A DNA‐Encoded Chemical Library Incorporating Elements of Natural Macrocycles
Stress, C., Sauter, B., Schneider, L. A., Sharpe, T., & Gillingham, D. G. (2019) · Angewandte Chemie International Edition · doi:10.1002/anie.201902513 · Cited by 100
A Mild, DNA-Compatible Nitro Reduction Using B2(OH)4
Du, H.-C., Simmons, N., Faver, J. C., Yu, Z., Palaniappan, M., Riehle, K. P., & Matzuk, M. M. (2019) · Organic Letters · doi:10.1021/acs.orglett.9b00497 · Cited by 95
Reaction development for DNA-encoded library technology: From evolution to revolution?
Götte, K., Chines, S., & Brunschweiger, A. (2020) · Tetrahedron Letters · doi:10.1016/j.tetlet.2020.151889 · Cited by 94
Gao, H., Lin, S., Zhang, S., Chen, W., Liu, X., Yang, G., Lerner, R. A., Xu, H., Zhou, Z., & Yi, W. (2020) · Angewandte Chemie International Edition · doi:10.1002/anie.202013052 · Cited by 94
Self-citationEvolution of chemistry and selection technology for DNA-encoded library
Ma, P., Zhang, S., Huang, Q., Gu, Y., Zhou, Z., Hou, W., Yi, W., & Xu, H. (2023) · Acta Pharmaceutica Sinica B · doi:10.1016/j.apsb.2023.10.001 · Cited by 91
A Chemistry for Incorporation of Selenium into DNA‐Encoded Libraries
Xu, H., Gu, Y., Zhang, S., Xiong, H., Ma, F., Lu, F., Ji, Q., Liu, L., Ma, P., Hou, W., et al. (2020) · Angewandte Chemie International Edition · doi:10.1002/anie.202003595 · Cited by 90
Self-citationWestphal, M. V., Hudson, L., Mason, J. W., Pradeilles, J. A., Zécri, F. J., Briner, K., & Schreiber, S. L. (2020) · Journal of the American Chemical Society · doi:10.1021/jacs.9b13186 · Cited by 89
Future challenges with DNA-encoded chemical libraries in the drug discovery domain
Zhao, G., Huang, Y., Zhou, Y., Li, Y., & Li, X. (2019) · Expert Opinion on Drug Discovery · doi:10.1080/17460441.2019.1614559 · Cited by 86
Encoded Library Technologies as Integrated Lead Finding Platforms for Drug Discovery
Ottl, J., Leder, L., Schaefer, J. V., & Dumelin, C. E. (2019) · Molecules · doi:10.3390/molecules24081629 · Cited by 86
Wang, S., Denton, K. E., Hobbs, K., Weaver, T., McFarlane, J. M. B., Connelly, K. E., Gignac, M. C., Milosevich, N., Hof, F. A., Paci, I., et al. (2019) · ACS Chemical Biology · doi:10.1021/acschembio.9b00654 · Cited by 86
Optimizing synthetic nucleic acid and protein nanocarriers: The chemical evolution approach
Freitag, F., & Wagner, E. (2020) · Advanced Drug Delivery Reviews · doi:10.1016/j.addr.2020.03.005 · Cited by 83
Rui, H., Ashton, K. S., Min, J., Wang, C. W., & Potts, P. R. (2023) · RSC Chemical Biology · doi:10.1039/d2cb00207h · Cited by 87
Badir, S. O., Sim, J., Billings, K., Csakai, A., Zhang, X., Dong, W., & Molander, G. A. (2020) · Organic Letters · doi:10.1021/acs.orglett.9b04568 · Cited by 72
Macrocyclic DNA-encoded chemical libraries: a historical perspective
Plais, L., & Scheuermann, J. (2021) · RSC Chemical Biology · doi:10.1039/d1cb00161b · Cited by 72
Merging C(sp 3 )–H activation with DNA-encoding
Fan, Z., Zhao, S., Liu, T., Shen, P., Cui, Z., Zhuang, Z., Shao, Q., Chen, J. S., Ratnayake, A. S., Flanagan, M. E., et al. (2020) · Chemical Science · doi:10.1039/d0sc03935g · Cited by 71
Favalli, N., Bassi, G., Pellegrino, C. E., Millul, J., Luca, R. D., Cazzamalli, S., Yang, S., Trenner, A., Mozaffari, N. L., Myburgh, R., et al. (2021) · Nature Chemistry · doi:10.1038/s41557-021-00660-y · Cited by 72
Self-citationCurrent strategies and progress for targeting the “undruggable” transcription factors
Zhuang, J., Liu, Q., Wu, D., & Tie, L. (2022) · Acta Pharmacologica Sinica · doi:10.1038/s41401-021-00852-9 · Cited by 77
Nanomaterials as efficient platforms for sensing DNA
Vikrant, K., Bhardwaj, N., Bhardwaj, S. K., Kim, K., & Deep, A. (2019) · Biomaterials · doi:10.1016/j.biomaterials.2019.05.026 · Cited by 71
DNA Encoded Libraries: A Visitor's Guide
Flood, D. T., Kingston, C., Vantourout, J. C., Dawson, P. E., & Baran, P. S. (2020) · Israel Journal of Chemistry · doi:10.1002/ijch.201900133 · Cited by 68
Wolpaw, A. J., Bayliss, R. W., Büchel, G., Dang, C. V., Eilers, M., Gustafson, W. C., Hansen, G. M., Jura, N., Knapp, S., Lemmon, M. A., et al. (2021) · Cancer Research · doi:10.1158/0008-5472.can-20-3108 · Cited by 74
DNA-Compatible [3 + 2] Nitrone–Olefin Cycloaddition Suitable for DEL Syntheses
Gerry, C. J., Yang, Z., Stasi, M., & Schreiber, S. L. (2019) · Organic Letters · doi:10.1021/acs.orglett.9b00017 · Cited by 67
Corso, A. D., Catalano, M., Schmid, A. S., Scheuermann, J., & Neri, D. (2018) · Angewandte Chemie International Edition · doi:10.1002/anie.201811650 · Cited by 67
Self-citationBaggio, C., Udompholkul, P., Gambini, L., Salem, A. F., Jossart, J. N., Perry, J. J. P., & Pellecchia, M. (2019) · Journal of Medicinal Chemistry · doi:10.1021/acs.jmedchem.9b01108 · Cited by 67
RASS‐Enabled S/P−C and S−N Bond Formation for DEL Synthesis
Flood, D. T., Zhang, X., Fu, X., Zhao, Z., Asai, S., Sanchez, B. B., Sturgell, E., Vantourout, J. C., Richardson, P., Flanagan, M. E., et al. (2020) · Angewandte Chemie International Edition · doi:10.1002/anie.201915493 · Cited by 64
Benhamou, R. I., Suresh, B. M., Tong, Y., Cochrane, W. G., Cavett, V. J., Vézina‐Dawod, S., Abegg, D., Childs‐Disney, J. L., Adibekian, A., Paegel, B. M., et al. (2022) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2114971119 · Cited by 62
Discovery of De Novo Macrocyclic Peptides by Messenger RNA Display
Peacock, H., & Suga, H. (2021) · Trends in Pharmacological Sciences · doi:10.1016/j.tips.2021.02.004 · Cited by 64
Palladium-Promoted DNA-Compatible Heck Reaction
Wang, X., Sun, H., Liu, J., Zhong, W., Zhang, M., Zhou, H., Dai, D., & Lu, X. (2019) · Organic Letters · doi:10.1021/acs.orglett.8b03926 · Cited by 59
Navigating the DNA encoded libraries chemical space
Martín, A. V., Nicolaou, C. A., & Toledo, M. Á. (2020) · Communications Chemistry · doi:10.1038/s42004-020-00374-1 · Cited by 60
Beato, E. D. P., Priego, J., Gironda-Martínez, A., González‐Pérez, F., Benavides, J., de Blas, J., Martín-Ortega, M. D., Toledo, M. Á., Ezquerra, J., & Torrado, A. (2019) · ACS Combinatorial Science · doi:10.1021/acscombsci.8b00142 · Cited by 58
Optimization of PROTAC Ternary Complex Using DNA Encoded Library Approach
Chen, Q., Liu, C., Wang, W., Meng, X., Cheng, X., Li, X.-Y., Cai, L., Luo, L., He, X., Qu, H., et al. (2023) · ACS Chemical Biology · doi:10.1021/acschembio.2c00797 · Cited by 55
Radical C–H Sulfonation of Arenes: Its Applications on Bioactive and DNA-Encoded Molecules
Zhang, Y., Xia, S., Shi, W., Lin, B., Su, X., Lu, W., Wu, X., Wang, X., Lu, X., Yan, M., et al. (2022) · Organic Letters · doi:10.1021/acs.orglett.2c03077 · Cited by 56
Chen, Y., Faver, J. C., Ku, A. F., Miklóssy, G., Riehle, K. P., Bohren, K. M., Ucisik, M. N., Matzuk, M. M., Yu, Z., & Simmons, N. (2020) · Bioconjugate Chemistry · doi:10.1021/acs.bioconjchem.9b00863 · Cited by 56
DNA‐Encoded Libraries: Towards Harnessing their Full Power with Darwinian Evolution
Dockerill, M., & Winssinger, N. (2022) · Angewandte Chemie International Edition · doi:10.1002/anie.202215542 · Cited by 57
Fan, Y., Feng, R., Zhang, X., Wang, Z., Xiong, F., Zhang, S., Zhong, Z., Yu, H., Zhang, Q., Zhang, Z., et al. (2024) · Acta Pharmaceutica Sinica B · doi:10.1016/j.apsb.2024.04.006 · Cited by 55
Favalli, N., Bassi, G., Zanetti, T., Scheuermann, J., & Neri, D. (2019) · Helvetica Chimica Acta · doi:10.1002/hlca.201900033 · Cited by 54
Self-citationYen‐Pon, E., Li, L., Levitre, G., Majhi, J., McClain, E. J., Voight, E. A., Crane, E. A., & Molander, G. A. (2022) · Journal of the American Chemical Society · doi:10.1021/jacs.2c03025 · Cited by 54
Jiang, L., Liu, S., Jia, X., Gong, Q., Wen, X., Lu, W., Yang, J., Wu, X., Wang, X., Suo, Y., et al. (2023) · Journal of the American Chemical Society · doi:10.1021/jacs.3c08852 · Cited by 52
Favalli, N., Biendl, S., Hartmann, M., Piazzi, J., Sladojevich, F., Gräslund, S., Brown, P. J., Näreoja, K., Schuler, H., Scheuermann, J., et al. (2018) · ChemMedChem · doi:10.1002/cmdc.201800193 · Cited by 53
Self-citationEvolution of the Selection Methods of DNA-Encoded Chemical Libraries
Song, Y., & Li, X. (2021) · Accounts of Chemical Research · doi:10.1021/acs.accounts.1c00375 · Cited by 52
Xie, J., Wang, S., Ma, P., Ma, F., Li, J., Wang, W., Lu, F., Xiong, H., Gu, Y., Zhang, S., et al. (2020) · iScience · doi:10.1016/j.isci.2020.101197 · Cited by 54
Self-citationA DNA‐Encoded Chemical Library Based on Peptide Macrocycles
Onda, Y., Bassi, G., Elsayed, A., Ulrich, F., Oehler, S., Plais, L., Scheuermann, J., & Neri, D. (2021) · Chemistry - A European Journal · doi:10.1002/chem.202005423 · Cited by 52
Self-citationAbiotic peptides as carriers of information for the encoding of small-molecule library synthesis
Rössler, S. L., Grob, N. M., Buchwald, S. L., & Pentelute, B. L. (2023) · Science · doi:10.1126/science.adf1354 · Cited by 54
Second generation DNA-encoded dynamic combinatorial chemical libraries
Reddavide, F. V., Cui, M., Lin, W., Fu, N., Heiden, S., Andrade, H., Thompson, M., & Zhang, Y. (2019) · Chemical Communications · doi:10.1039/c9cc01429b · Cited by 51
Beyond protein binding: recent advances in screening DNA-encoded libraries
Kodadek, T. J., Paciaroni, N. G., Balzarini, M., & Dickson, P. (2019) · Chemical Communications · doi:10.1039/c9cc06256d · Cited by 50
Bassi, G., Favalli, N., Vuk, M., Catalano, M., Martinelli, A. L., Trenner, A., Porro, A., Yang, S., Tham, C. L., Moroglu, M., et al. (2020) · Advanced Science · doi:10.1002/advs.202001970 · Cited by 48
Self-citationSelection of DNA‐Encoded Dynamic Chemical Libraries for Direct Inhibitor Discovery
Deng, Y., Peng, J., Xiong, F., Song, Y., Zhou, Y., Zhang, J., Lam, F. S., Xie, C., Shen, W., Huang, Y., et al. (2020) · Angewandte Chemie International Edition · doi:10.1002/anie.202005070 · Cited by 49
Quantitative Assessment of Affinity Selection Performance by Using DNA‐Encoded Chemical Libraries
Sannino, A., Gabriele, E., Bigatti, M., Mulatto, S., Piazzi, J., Scheuermann, J., Neri, D., Donckèle, E. J., & Samain, F. (2018) · ChemBioChem · doi:10.1002/cbic.201800766 · Cited by 48
Self-citationHou, W., Zhang, Y., Huang, F., Chen, W., Gu, Y., Wang, Y., Pang, J., Dong, H., Pan, K., Zhang, S., et al. (2024) · Angewandte Chemie International Edition · doi:10.1002/anie.202318534 · Cited by 48
DNA-Encoded Combinatorial Library of Macrocyclic Peptoids
Shin, M. H., Lee, K., & Lim, H. (2019) · Bioconjugate Chemistry · doi:10.1021/acs.bioconjchem.9b00628 · Cited by 48
Vummidi, B. R., Soler, L. F., Daguer, J., Dockerill, M., Barluenga, S., & Winssinger, N. (2021) · Nature Chemistry · doi:10.1038/s41557-021-00829-5 · Cited by 48
Kolusu, S. R. N., & Nappi, M. (2022) · Chemical Science · doi:10.1039/d2sc01621d · Cited by 47
Zhou, Z., Gu, Y., Wu, L., Wang, Y., Xu, H., Ma, L., Zhang, Z., Zhao, J., Zhang, W., Peng, W., et al. (2023) · Chem · doi:10.1016/j.chempr.2023.07.022 · Cited by 47
Recent advances in DNA-encoded libraries
Gao, Y., Liu, J., Huang, S., Du, N., Zhang, G., & Li, Y. (2025) · Chemical Communications · doi:10.1039/d5cc02904j · Cited by 47
Inverse-Electron-Demand Diels–Alder Reactions for the Synthesis of Pyridazines on DNA
Li, H., Sun, Z. C., Wu, W., Wang, X., Zhang, M., Lu, X., Zhong, W., & Dai, D. (2018) · Organic Letters · doi:10.1021/acs.orglett.8b03114 · Cited by 46
Zhao, G., Zhong, S., Zhang, G., Li, Y., & Li, Y. (2021) · Angewandte Chemie International Edition · doi:10.1002/anie.202115157 · Cited by 46
Carbohydrate–DNA Conjugation Enabled by Glycosyl Radicals Generated from Glycosyl Sulfinates
Zeng, H., Li, Y., Wu, R., Liu, D., Zhang, Y., Xu, S., & Niu, D. (2023) · Organic Letters · doi:10.1021/acs.orglett.3c00833 · Cited by 47
Functionalization of DNA-Tagged Alkenes with Diazo Compounds via Photocatalysis
Fu, X., Tang, J., Hua, R., Li, X., Kang, Z., Qiu, H., & Hu, W. (2022) · Organic Letters · doi:10.1021/acs.orglett.2c00516 · Cited by 46
Puglioli, S., Schmidt, E., Pellegrino, C. E., Prati, L., Oehler, S., Luca, R. D., Galbiati, A., Comacchio, C., Nadal, L., Scheuermann, J., et al. (2022) · Chem · doi:10.1016/j.chempr.2022.10.006 · Cited by 47
Self-citationGironda-Martínez, A., Neri, D., Samain, F., & Donckèle, E. J. (2019) · Organic Letters · doi:10.1021/acs.orglett.9b03726 · Cited by 46
Self-citationSolid-phase synthesis of DNA-encoded libraries via an “aldehyde explosion” strategy
Paciaroni, N. G., Ndungu, J. M., & Kodadek, T. J. (2020) · Chemical Communications · doi:10.1039/d0cc01474e · Cited by 45
Scanning Protein Surfaces with DNA‐Encoded Libraries
Kunig, V. B. K., Potowski, M., Škopić, M. K., & Brunschweiger, A. (2020) · ChemMedChem · doi:10.1002/cmdc.202000869 · Cited by 44
Liu, S., Qi, J., Lu, W., Wang, X., & Lu, X. (2021) · Organic Letters · doi:10.1021/acs.orglett.0c04118 · Cited by 45
Wang, S., Shi, X., Li, J., Huang, Q., Ji, Q., Yao, Y., Wang, T., Liu, L., Ye, M., Deng, Y., et al. (2022) · Advanced Science · doi:10.1002/advs.202201258 · Cited by 44
Highly pure DNA-encoded chemical libraries by dual-linker solid-phase synthesis
Keller, M., Petrov, D. D., Gloger, A., Dietschi, B., Jobin, K., Gradinger, T. B., Martinelli, A. L., Plais, L., Onda, Y., Neri, D., et al. (2024) · Science · doi:10.1126/science.adn3412 · Cited by 44
Self-citationDevelopments in Photoredox-Mediated Alkylation for DNA-Encoded Libraries
Patel, S., Badir, S. O., & Molander, G. A. (2020) · Trends in Chemistry · doi:10.1016/j.trechm.2020.11.010 · Cited by 44
Homogeneous and Functional Group Tolerant Ring-Closing Metathesis for DNA-Encoded Chemical Libraries
Monty, O. B. C., Nyshadham, P., Bohren, K. M., Palaniappan, M., Matzuk, M. M., Young, D. W., & Simmons, N. (2020) · ACS Combinatorial Science · doi:10.1021/acscombsci.9b00199 · Cited by 43
Oehler, S., Lucaroni, L., Migliorini, F., Elsayed, A., Prati, L., Puglioli, S., Matasci, M., Schira, K., Scheuermann, J., Yudin, D., et al. (2023) · Nature Chemistry · doi:10.1038/s41557-023-01257-3 · Cited by 44
Self-citationSynthesis of Multifunctional 2-Aminobenzimidazoles on DNA via Iodine-Promoted Cyclization
Su, L., Feng, J., Peng, T., Wan, J., Fan, J., Li, J., O’Connell, J. C., Lancia, D. R., Franklin, G. J., & Liu, G. (2020) · Organic Letters · doi:10.1021/acs.orglett.9b04578 · Cited by 41
Metadata
- Authors
- Neri, D., & Lerner, R. A.
- Affiliations
- ETH Zurich (CH)
- Scripps Research Institute (US)
- Venue
- Annual Review of Biochemistry
- Publisher
- Annual Reviews
- Published
- 2018-06-20
- Volume
- 87
- Issue
- 1
- Pages
- 479-502
- ISSN
- 0066-4154 (ISSN-L)
- 1545-4509
- PMC
- PMC6080696
- OpenAlex
- W2782995788
- Cited by
- 364
- References
- 97
- Citations by year
- 2026: 26 · 2025: 32 · 2024: 27 · 2023: 34 · 2022: 42 · 2021: 63 · 2020: 81 · 2019: 46 · 2018: 13
- FWCI
- 5.03
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Locations
- Annual Review of Biochemistry (publishedVersion)
- PubMed (publishedVersion)
- Europe PMC (PubMed Central) (acceptedVersion)
- PubMed Central (acceptedVersion)
- Funders
- National Science Foundation
- Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung (310030B_163479/1, 163479, 160699)
- Topics
- Physical Sciences › Chemistry › Organic Chemistry › Chemical Synthesis and Analysis
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › DNA and Nucleic Acid Chemistry
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Advanced biosensing and bioanalysis techniques
- Keywords
- DNA-encoded libraries, DNA barcoding, combinatorial libraries, protein-ligand binding, ligand discovery, library screening, molecular identification
- MeSH terms
- Animals, Humans, Ligands, Gene Library, Peptide Library, Combinatorial Chemistry Techniques, Small Molecule Libraries, Drug Discovery
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review