The DOI matches its Crossref record; 5 of the 5 references it cites were found in a registry or an index.
Accuracy of Tetrode Spike Separation as Determined by Simultaneous Intracellular and Extracellular Measurements
Abstract
Simultaneous recording from large numbers of neurons is a prerequisite for understanding their cooperative behavior. Various recording techniques and spike separation methods are being used toward this goal. However, the error rates involved in spike separation have not yet been quantified. We studied the separation reliability of "tetrode" (4-wire electrode)-recorded spikes by monitoring simultaneously from the same cell intracellularly with a glass pipette and extracellularly with a tetrode. With manual spike sorting, we found a trade-off between Type I and Type II errors, with errors typically ranging from 0 to 30% depending on the amplitude and firing pattern of the cell, the similarity of the waveshapes of neighboring neurons, and the experience of the operator. Performance using only a single wire was markedly lower, indicating the advantages of multiple-site monitoring techniques over single-wire recordings. For tetrode recordings, error rates were increased by burst activity and during periods of cellular synchrony. The lowest possible separation error rates were estimated by a search for the best ellipsoidal cluster shape. Human operator performance was significantly below the estimated optimum. Investigation of error distributions indicated that suboptimal performance was caused by inability of the operators to mark cluster boundaries accurately in a high-dimensional feature space. We therefore hypothesized that automatic spike-sorting algorithms have the potential to significantly lower error rates. Implementation of a semi-automatic classification system confirms this suggestion, reducing errors close to the estimated optimum, in the range 0-8%.
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Cites
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Self-citationReplay and Time Compression of Recurring Spike Sequences in the Hippocampus
Nádasdy, Z., Hirase, H., Czurkó, A., Csicsvari, J., & Buzsáki, G. (1999) · The Journal of Neuroscience · doi:10.1523/jneurosci.19-21-09497.1999 · Cited by 932 · cited 6×
“We therefore confirm that spike separation is significantly more effective when multiple sites are used for unit recording (Drake et al. 1988; McNaughton et al. 1983; Nadasdy et al. 1998; Recce and O’Keefe 1989).”
BackgroundMethodInfluentialSelf-citationThe global record of memory in hippocampal neuronal activity
Wood, E. R., Dudchenko, P. A., & Eichenbaum, H. (1999) · Nature · doi:10.1038/17605 · Cited by 707
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What we can do and what we cannot do with fMRI
Logothetis, N. K. (2008) · Nature · doi:10.1038/nature06976 · Cited by 3,612
Theta oscillations in the hippocampus
Buzsáki, G. (2002) · Neuron · doi:10.1016/s0896-6273(02)00586-x · Cited by 3,332
Self-citationFully integrated silicon probes for high-density recording of neural activity
Jun, J. J., Steinmetz, N. A., Siegle, J. H., Denman, D. J., Bauza, M., Barbarits, B., Lee, A. K., Anastassiou, C. A., Andrei, A., Aydın, Ç., et al. (2017) · Nature · doi:10.1038/nature24636 · Cited by 2,190
Self-citationUnsupervised spike detection and sorting with wavelets and superparamagnetic clustering
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Metadata
- Authors
- Harris, K. D., Henze, D. A., Csicsvari, J., Hirase, H., & Buzsáki, G.
- Venue
- Journal of Neurophysiology
- Publisher
- American Physiological Society
- Published
- 2000-07
- Volume
- 84
- Issue
- 1
- Pages
- 401-414
- ISSN
- 0022-3077 (ISSN-L)
- 1522-1598
- OpenAlex
- W2114747787
- Cited by
- 1,151
- References
- 5
- FWCI
- 4.78
- Type
- journal article
- Language
- en
- Open access
- closed
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- Harris, K. D., Henze, D. A., Csicsvari, J., Hirase, H., & Buzsáki, G. (2000). Accuracy of Tetrode Spike Separation as Determined by Simultaneous Intracellular and Extracellular Measurements. Journal of Neurophysiology. https://doi.org/10.1152/jn.2000.84.1.401
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