Hydroxyl radical induced structural changes of collagen
Open accessAbstract
Extracellular matrix (ECM) plays an important role in cell differentiation, growth, migration and apoptosis. Collagen is the most abundant protein family in vivo , but its function has still not been clearly defined yet. Reactive oxygen species (ROS) have a central role in oxidative cell stress. Electron spin resonance (ESR) spectroscopy indicates that type I collagen could uniquely scavenge hydroxyl radicals in dose‐ and time‐dependent manner; whereas BSA and gelatin (a denatured collagen) have no such an effect. However, the mechanism by which type I collagen scavenges hydroxyl radicals is different from that of GSH, a well‐known free radical scavenger. Using a new method, two‐dimensional FTIR correlation analysis, for the first time, we show that the order of functional group changes of type I collagen in this process is amide I earlier than amide II than amide III than –CH– than ν (C=O). The results indicates that the structure of the main chain of collagen changed first, followed by more residue group ν (C=O) exposed to hydroxyl radicals. The reaction with the carbonyl group in collagen causes the hydroxyl free radicals to be scavenged. Therefore, ECM can effectively scavenge ROS under normal physiological conditions. When the proteins of ECM were denatured in the same way as gelatin, they lost their function as a free radical scavenger. All of these results provide new insight into therapy or prevention of oxidative stress, apoptosis and ageing.
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The FTIR spectrum of pure type I collagen exhibits characteristic absorption bands: amide I at approximately 1642 cm−1, amide II at 1537 cm−1, and amide III at 1236 cm−1.
“The strong band centered at approximately 1642 cm⁻¹ is assigned to the amide I vibration, predominantly arising from C=O stretching of the peptide backbone and highly sensitive to collagen secondary structure.”
From Montmorillonite-reinforced methacrylated collagen/methacrylated silk fibroin hydrogel-based inks: rheological and physicochemical characterization for bone scaffold applications (2026) · cites this paper as [34]
Section 3.2 identifies an amide I band at 1640 cm⁻¹, supporting the citing sentence’s assignment near 1642 cm⁻¹. But the fuller attributed claim gives amide II at 1537 cm⁻¹, whereas section 3.2 reports 1547 cm⁻¹; section 3.3 places amide III near 1239 rather than 1236 cm⁻¹. The paper therefore supports the band identities, but not all three stated positions. (LLM, conf=0.86)
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Cites
Oxidative stress in neurodegeneration: Cause or consequence?
Andersen, J. K. (2004) · Nature Medicine · doi:10.1038/nrn1434 · Cited by 1,869 · see citing works
Two-Dimensional Infrared (2D IR) Spectroscopy: Theory and Applications
Noda, I. (1990) · Applied Spectroscopy · doi:10.1366/0003702904087398 · Cited by 889 · see citing works
Barja, G. (2004) · Trends in Neurosciences · doi:10.1016/j.tins.2004.07.005 · Cited by 653 · see citing works
Free radical biology and medicine: it's a gas, man!
Pryor, W. A., Houk, K. N., Foote, C. S., Fukuto, J. M., Ignarro, L. J., Squadrito, G. L., & Davies, K. J. A. (2006) · American Journal of Physiology-Regulatory, Integrative and Comparative Physiology · doi:10.1152/ajpregu.00614.2005 · Cited by 465 · see citing works
Raines, E. W. (2000) · International Journal of Experimental Pathology · doi:10.1046/j.1365-2613.2000.00155.x · Cited by 343 · see citing works
Poon, H. F., Calabrese, V., Scapagnini, G., & Butterfield, D. A. (2004) · Clinics in Geriatric Medicine · doi:10.1016/j.cger.2004.02.005 · Cited by 292 · see citing works
Hirst, S. J., Twort, C. H. C., & Lee, T. H. (2000) · American Journal of Respiratory Cell and Molecular Biology · doi:10.1165/ajrcmb.23.3.3990 · Cited by 268 · see citing works
Free Radicals: Key to Brain Aging and Heme Oxygenase as a Cellular Response to Oxidative Stress
Poon, H. F., Calabrese, V., Scapagnini, G., & Butterfield, D. A. (2004) · The Journals of Gerontology Series A · doi:10.1093/gerona/59.5.m478 · Cited by 235 · see citing works
Recent Developments in Two-Dimensional Infrared (2D IR) Correlation Spectroscopy
Noda, I., Dowrey, A. E., & Marcott, C. A. (1993) · Applied Spectroscopy · doi:10.1366/0003702934067513 · Cited by 147 · see citing works
Wu, B. J., Kathir, K., Witting, P. K., Beck, K., Choy, K. J., Li, C., Croft, K. D., Mori, T. A., Tanous, D. J., Adams, M. R., et al. (2006) · The Journal of Experimental Medicine · doi:10.1084/jem.20052321 · Cited by 145 · see citing works
Shimizu‐Hirota, R., Sasamura, H., Kuroda, M., Kobayashi, E., Hayashi, M., & Saruta, T. (2004) · Circulation Research · doi:10.1161/01.res.0000126049.79800.ca · Cited by 98 · see citing works
Hawkins, C. L., & Davies, M. J. (1997) · Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease · doi:10.1016/s0925-4439(96)00069-5 · Cited by 85 · see citing works
Xi, H., Akishita, M., Nagai, K., Yu, W., Hasegawa, H., Eto, M., Kozaki, K., & Toba, K. (2006) · Atherosclerosis · doi:10.1016/j.atherosclerosis.2006.05.040 · Cited by 82 · see citing works
Free radical scavenging inhibits STAT phosphorylation following in vivo ischemia/reperfusion injury
McCormick, J., Barry, S. P., Sivarajah, A., Stefanutti, G., Townsend, P. A., Lawrence, K. M., Eaton, S. D., Knight, R. A., Thiemermann, C., Latchman, D. S., et al. (2006) · The FASEB Journal · doi:10.1096/fj.06-6188fje · Cited by 76 · see citing works
Free Radicals and the Pathogenesis of Type 1 Diabetes
Tabatabaie, T., Vasquez-Weldon, A., Moore, D. R., & Kotake, Y. (2003) · Diabetes · doi:10.2337/diabetes.52.8.1994 · Cited by 64 · see citing works
Lefèvre, T., Arseneault, K., & Pézolet, M. (2004) · Biopolymers · doi:10.1002/bip.20010 · Cited by 54 · see citing works
EXTRACELLULAR MATRIX-DRIVEN ALVEOLAR EPITHELIAL CELL DIFFERENTIATION IN VITRO
Olsen, C. E., Isakson, B. E., Seedorf, G., Lubman, R. L., & Boitano, S. A. (2005) · Experimental Lung Research · doi:10.1080/01902140590918830 · Cited by 49 · see citing works
Extracellular matrix regulates glomerular epithelial cell survival and proliferation
Bijian, K., Takano, T., Papillon, J., Khadir, A., & Cybulsky, A. V. (2004) · American Journal of Physiology-Renal Physiology · doi:10.1152/ajprenal.00259.2003 · Cited by 47 · see citing works
Liu, C., Yang, C., Liu, X., & Li, S. (2005) · Canadian Journal of Physiology and Pharmacology · doi:10.1139/y05-033 · Cited by 46 · see citing works
Two-dimensional infrared (2D IR) spectroscopy. A new tool for interpreting infrared spectra
Noda, I., Dowrey, A. E., & Marcott, C. A. (1988) · Microchimica Acta · doi:10.1007/bf01205847 · Cited by 40 · see citing works
Juszczak, L. J. (2004) · Journal of Biological Chemistry · doi:10.1074/jbc.m309971200 · Cited by 37 · see citing works
Two-Dimensional Infrared (2D IR) Spectroscopy
Noda, I., Dowrey, A. E., & Marcott, C. A. (2007) · Wiley-VCH eBooks · doi:10.1002/9783527613922.ch01 · Cited by 34 · see citing works
Yu, Z., Liu, J., & Noda, I. (2003) · Applied Spectroscopy · doi:10.1366/000370203322640251 · Cited by 30 · see citing works
Nagler, A., Katz, A., Aingorn, H., Miao, H., Condiotti, R., Genina, O., Pines, M., & Vlodavsky, I. (1997) · Kidney International · doi:10.1038/ki.1997.486 · Cited by 29 · see citing works
Apoptosis and extracellular matrix remodelling in human silicosis
Delgado, L., Parra, E. R., & Capelozzi, V. L. (2006) · Histopathology · doi:10.1111/j.1365-2559.2006.02477.x · Cited by 29 · see citing works
Thermodynamic model of secondary structure for α-helical peptides and proteins
Lomize, A., & Mosberg, H. (1997) · Biopolymers · doi:10.1002/(sici)1097-0282(199708)42:2 · Cited by 26 · see citing works
Free radical activity in obese patients with type 2 diabetes mellitus.
Mohora, M., Vîrgolici, B., Paveliu, F., Lixandru, D., Muscurel, C., & Greabu, M. (2006) · PubMed · Cited by 24 · see citing works
Eccleston, P. A., Gunton, D. J., & Silberberg, D. H. (1986) · Developmental Neuroscience · doi:10.1159/000112299 · Cited by 24 · see citing works
Free radical oxidation products in plasma and synovial fluid of horses with synovial inflammation
AUER, D. E., NG, J., & WRIGHT, A. S. (1993) · Australian Veterinary Journal · doi:10.1111/j.1751-0813.1993.tb15137.x · Cited by 23 · see citing works
Okumoto, K., Saito, T., Hattori, E., Ito, J., Suzuki, A., Misawa, K., Ishii, R., Karasawa, T., Haga, H., Sanjo, M., et al. (2005) · Journal of Hepatology · doi:10.1016/j.jhep.2005.01.037 · Cited by 20 · see citing works
Type I Collagen Inhibits Hydroxyl Radical-Induced Apoptosis
He, Y., Chen, J. W., Ren, J., Wang, G., & Cai, G. (2002) · The Journal of Biochemistry · doi:10.1093/oxfordjournals.jbchem.a003232 · Cited by 19 · see citing works
Self-citationOkabe, T.-A., Kishimoto, C., Shimada, K., Murayama, T., Yokode, M., & Kita, T. (2006) · Circulation Journal · doi:10.1253/circj.70.1216 · Cited by 15 · see citing works
Role of extracellular matrix in regulation of staurosporine-induced apoptosis in breast cancer cells
Vasaturo, F., Malacrino, C., Sallusti, E., Coppotelli, G., Birarelli, P., Giuffrida, A., Albonici, L., Simonelli, L., Modesti, A., Modesti, M., et al. (2005) · Oncology Reports · doi:10.3892/or.13.4.745 · Cited by 11 · see citing works
Öktem, G., Vatansever, S., Ayla, Ş., Uysal, A., Aktas, S., Karabulut, B., & Bılır, A. (2006) · Oncology Reports · doi:10.3892/or.15.2.335 · Cited by 9 · see citing works
Free Radical Biology: A Paradox in Cancer Research
Glover, J. (1990) · JNCI Journal of the National Cancer Institute · doi:10.1093/jnci/82.11.902 · Cited by 8 · see citing works
[Free-radical reactions in diabetes mellitus].
Mrowicka, M. (2005) · PubMed · Cited by 8 · see citing works
Basu, A., Sehajpal, P. K., Ogiste, J. S., & Lander, H. M. (1999) · Antioxidants and Redox Signaling · doi:10.1089/ars.1999.1.1-105 · Cited by 5 · see citing works
Medianik, I. A., & Fraerman, A. P. (2006) · PubMed · Cited by 1 · see citing works
[Free radical peroxidation processes and cardiotoxicity in treatment of malignant lymphomas].
Vi, E., Pf, L., & Kochkareva, I. B. (2006) · PubMed · Cited by 1 · see citing works
Flagged first, then by citations
2 of the 41 references couldn’t be matched to a known paper.
Research works printed but not linked: 1
- Y.H. Li, J.C. Yue and G.P. Cai, Fluorescence characterization of type I collagen from normal and silicotic rats and its quenching dynamics induced by hypocrellin B, Biopolymers 42 (1997), 219-226.
Cited by
Sorted by citations
Physico-chemical characterization of collagen scaffolds for tissue engineering
León-Mancilla, B. H., Araiza-Téllez, M. A., Flores–Flores, J. O., & Piña-Barba, M. C. (2016) · Journal of Applied Research and Technology · doi:10.1016/j.jart.2016.01.001 · Cited by 103 · see citing works
Effects of bone surface topography and chemistry on macrophage polarization
Özçolak, B., Erenay, B., Odabaş, S., Jandt, K. D., & Gari̇pcan, B. (2024) · Scientific Reports · doi:10.1038/s41598-024-62484-3 · Cited by 44 · see citing works
Preparation and Physicochemical Characterization of Gelatin–Aldehyde Derivatives
El-Meligy, M. A., Valachová, K., Juránek, I., Tamer, T. M., & Šoltés, L. (2022) · Molecules · doi:10.3390/molecules27207003 · Cited by 37 · see citing works
Electrosprayed Collagen/Gentamicin nanoparticles coated microneedle patches for skin treatment
Mutlu, M. E., Ulağ, S., Şengör, M., Dağlilar, S., Narayan, R. J., & Gündüz, O. (2021) · Materials Letters · doi:10.1016/j.matlet.2021.130844 · Cited by 32 · see citing works
Oriented Strontium Carbonate Nanocrystals within Collagen Films for Flexible Piezoelectric Sensors
Fang, W., Ping, H., Li, X., Liu, X., Wan, F., Tu, B., Xie, H., O'Reilly, P., Wang, H., Wang, W., et al. (2021) · Advanced Functional Materials · doi:10.1002/adfm.202105806 · Cited by 29 · see citing works
Xiao, H., Cai, G., & Liu, M. (2007) · Archives of Biochemistry and Biophysics · doi:10.1016/j.abb.2007.08.035 · Cited by 26 · see citing works
Self-citationVillanueva, I., Farnsworth, N. L., & Bryant, S. J. (2009) · Tissue Engineering Part A · doi:10.1089/ten.tea.2009.0001 · Cited by 20 · see citing works
Zupančič, B., Umek, N., Ugwoke, C. K., Cvetko, E., Horvat, S., & Grdadolnik, J. (2022) · International Journal of Molecular Sciences · doi:10.3390/ijms232012498 · Cited by 15 · see citing works
Fadda, M., Żych, A., Carzino, R., Athanassiou, A., & Perotto, G. (2023) · Green Chemistry · doi:10.1039/d3gc04048h · Cited by 13 · see citing works
Maarof, M., Nadzir, M. M., Mun, L. S., Fauzi, M. B., Chowdhury, S. R., Idrus, R. B. H., & Lokanathan, Y. (2021) · Polymers · doi:10.3390/polym13040508 · Cited by 13 · see citing works
Alarcón-Apablaza, J., Godoy, K., Jarpa–Parra, M., Garrido‐Miranda, K. A., & Fuentes, R. (2024) · Polymers · doi:10.3390/polym16243499 · Cited by 5 · see citing works
Enzymatic and non-enzymatic oxidation of fibrillar collagen
Mathias-netto, F. C., Cantuária, N. M., & Gaspar, R. S. (2026) · Redox Report · doi:10.1080/13510002.2026.2682046 · Cited by 3 · see citing works
Quiroz, C. E. A., Ruiz, Y. G., Rios, J. F. U., Escobar, E. G. L., & Rodrigues, M. A. S. (2025) · Results in Engineering · doi:10.1016/j.rineng.2025.104828 · Cited by 2 · see citing works
Soft tissue applications of biocomposites
Santin, M. (2010) · Elsevier eBooks · doi:10.1533/9781845697372.1.59 · Cited by 2 · see citing works
Medical-grade collagen peptide in injectables provides antioxidant protection
Kobayashi, K., Maehata, Y., Okada, Y., Kusubata, M., Hattori, S., Tanaka, K., Miyamoto, C., Yoshino, F., Yoshida, A., Tokutomi, F., et al. (2013) · Pharmaceutical Development and Technology · doi:10.3109/10837450.2013.860547 · Cited by 2 · see citing works
H2O2 Causes Improved Adhesion Between a Polysaccharide-based Membrane and Intestinal Serosa
Scognamiglio, F., Travan, A., Donati, I., Borgogna, M., Marsich, E., Andersen, T., & Paoletti, S. (2016) · Colloids and Interface Science Communications · doi:10.1016/j.colcom.2016.11.002 · Cited by 2 · see citing works
Valorization of treated wastewater from the soaking of baby alpaca skin fur
Morales, J. J. D., Monzón, L. A. T., Nieto, R. L., Jorge-Montalvo, P., & Figueroa, L. V. (2024) · Heliyon · doi:10.1016/j.heliyon.2024.e38247 · Cited by 1 · see citing works
Iafisco, M., Scalera, F., Striani, R., Sibillano, T., Adamiano, A., Corcione, C. E., Giannini, C., Quarta, E., Quarta, A., Casella, M., et al. (2026) · Biomass and Bioenergy · doi:10.1016/j.biombioe.2025.108900 · Cited by 1 · see citing works
Jiménez, K. M. T., Alonso, C., Vega, M. A., Juanes‐Velasco, P., Menéses-Rivera, I., & Velásquez-Lozano, M. E. (2026) · Pharmaceutics · doi:10.3390/pharmaceutics18040463 · Cited by 1 · see citing works
Antunes, B. S. L., Pedrini, F., Komatsu, D., Asami, J., Dicko, C., & Duek, E. A. R. (2026) · International Journal of Biological Macromolecules · doi:10.1016/j.ijbiomac.2026.154129
Differentiation Induction of Mesenchymal Stem Cells by a Au Delivery Platform
Yang, M., Chiu, C., Ke, Y.-C., Yang, Y., Chang, K.-B., Chen, C., Lee, H., Tang, C., Liu, B., & Hung, H. (2023) · Cells · doi:10.3390/cells12141893
Pranathy, K., Pathmanapan, S., Ponesakki, G., & Anandasadagopan, S. K. (2025) · Journal of Bioactive and Compatible Polymers · doi:10.1177/08839115251359662
Curtis, M., Kim, Y., Patil, R., Zhang, X., Jayatilake, M. M., Bulgin, O., Lialios, P., Surrency, S., Tarrah, S., Lazaris, A. K., et al. (2025) · Advanced Healthcare Materials · doi:10.1002/adhm.202502606
Ravi, K., Moses, J. A., Natarajan, V., Meenatchi, R., & Shanmugasundaram, S. (2026) · Journal of Food Engineering · doi:10.1016/j.jfoodeng.2026.113026
Two stage reorganization of bone apatite during heating
Bibko, A. A., Shendrik, R. Y., Bukharova, O. V., Antonov, M. S., Khrushcheva, M. O., & Lychagin, D. V. (2026) · МИНЕРАЛОГИЯ (MINERALOGY) · doi:10.35597/2313-545x-2026-12-1-6
Ugwoke, C. K., Abdelmonaem, M. E. A., Ganc, P., Alibegović, A., Cvetko, E., Grdadolnik, J., Zupančič, B., & Umek, N. (2026) · Results in Chemistry · doi:10.1016/j.rechem.2026.103642
Wang, S., Mao, X., Wang, C., Liu, Y., Zhang, C., Yao, S., Bai, L., Oliveira, J. M., Reis, R. L., Bai, Y., et al. (2026) · Research · doi:10.34133/research.1408
Seyal, T. A., Khan, A. M., Abbas, K., Nawaz, M. S., Farooq, H., Waris, T. S., Shah, S. T. A., MacNeil, S., & Yar, M. (2026) · Biomaterials Advances · doi:10.1016/j.bioadv.2026.215190
- Authors
- Xiao, H., Cai, G., & Liu, M.
- Affiliations
- University of Toronto (CA)
- Tsinghua University (CN)
- Corresponding author
- Cai, Guoping
- ORCID
- Liu, Mingyao
- Venue
- Journal of Spectroscopy
- Publisher
- Wiley
- Published
- 2007-01
- Volume
- 21
- Issue
- 2
- Pages
- 91-103
- ISSN
- 2314-4920 (ISSN-L)
- 2314-4939
- OpenAlex
- W2124731793
- Cited by
- 28
- References
- 41
- Citations by year
- 2026: 9 · 2025: 3 · 2024: 3 · 2023: 2 · 2022: 2 · 2021: 3 · 2016: 2 · 2013: 1
- FWCI
- 0.51
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Licence
- Locations
- Journal of Spectroscopy (publishedVersion, cc-by)
- TSpace (University of Toronto) (submittedVersion, cc-by)
- Funders
- Tsinghua University
- Topics
- Physical Sciences › Materials Science › Biomaterials › Collagen: Extraction and Characterization
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Biophysics › Spectroscopy Techniques in Biomedical and Chemical Research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Biophysics › Electron Spin Resonance Studies
- Keywords
- type I collagen, hydroxyl radical scavenging, reactive oxygen species, extracellular matrix, collagen denaturation, gelatin, oxidative stress, apoptosis, aging
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