A Novel Breast Cancer–Associated BRIP1 ( FANCJ/BACH1 ) Germ-line Mutation Impairs Protein Stability and Function
Open accessPublished version of a preprint
Abstract
Purpose: BRCA1-interacting protein 1 (BRIP1; FANCJ/BACH1), which encodes a DNA helicase that interacts with BRCA1, has been suggested to be a low-penetrance breast cancer predisposing gene. We aimed to assess whether BRIP1 mutations contribute to breast cancer susceptibility in our population and, if so, to investigate the effect of such mutation(s) on BRIP1 function. Experimental Design: A series of 49 breast/ovarian cancer families, devoid of a BRCA1/BRCA2 mutation, were screened for BRIP1 mutations. Functional analyses, including coimmunoprecipitation and stability assays, were employed to further characterize a previously unreported variant. Results: Five sequence alterations were identified, of which four had been already described. Herein, we report a novel BRIP1 germ-line mutation identified in a woman with early-onset breast cancer. The mutation consists of a 4-nucleotide deletion (c.2992-2995delAAGA) in BRIP1 exon 20 that causes a shift in the reading frame, disrupts the BRCA1-binding domain of BRIP1, and creates a premature stop codon. Functional analysis of the recombinant mutant protein in transfected cells showed that the truncation interferes with the stability of the protein and with its ability to interact with BRCA1. Loss of the wild-type BRIP1 allele with retention of the mutated one was observed in the patient's breast tumor tissue. Conclusions: These results, by showing that the newly identified BRIP1 c.2992-2995delAAGA mutation is associated with instability and functional impairment of the encoded protein, provide further evidence of a breast cancer–related role for BRIP1.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Reduced protein expression was reported for two breast cancer-associated FANCJ mutants, including c.2992-2995delAAGA, which creates a deletion and a premature stop codon after the helicase domain.
“Using this approach, reduced protein expression was reported for two breast cancer-associated FANCJ mutants, including c.2992–2995delAAGA, which generates a deletion and results in a premature stop codon after the helicase domain [43].”
From Hereditary Breast Cancer and the BRCA1-Associated FANCJ/BACH1/BRIP1 (2011) · cites this paper as [43]
A germline FANCJ mutation, c.2992-2995delAAGA, was identified in a tumor that had lost the corresponding wild-type allele.
“More recently, the idea that FANCJ could act as a classic tumor suppressor was bolstered with the identification of a germline FANCJ mutation, c.2992–2995delAAGA, in which the tumor had lost the corresponding wild-type allele [43].”
From Hereditary Breast Cancer and the BRCA1-Associated FANCJ/BACH1/BRIP1 (2011) · cites this paper as [43]
Several FANCJ mutations targeting noncoding genomic DNA have been identified in breast cancer and Fanconi anemia patients.
“Along these lines, several FANCJ mutations targeting noncoding genomic DNA have been identified in both breast cancer and FA patients [28,43].”
From Hereditary Breast Cancer and the BRCA1-Associated FANCJ/BACH1/BRIP1 (2011) · cites this paper as [43]
Tumor suppression likely requires both the helicase domain and nuclear co-localization with BRCA1, because variants in the nuclear localization sequence (A173C) or BRCA1-binding domain were detected in patients with a strong family history of breast cancer.
“Tumor suppression likely requires not only the helicase domain, but also nuclear co-localization with BRCA1, given that variants with a sequence change in the nuclear localization sequence (A173C) [60] or BRCA1-binding domain were detected in patients with a strong family history of breast cancer [43,53].”
From Hereditary Breast Cancer and the BRCA1-Associated FANCJ/BACH1/BRIP1 (2011) · cites this paper as [43]
BRCA1 binding is disrupted in the FANCJ breast cancer-associated mutation c.2992-2995delAAGA.
“In addition, BRCA1 binding is disrupted in the FANCJ breast cancer-associated mutation c.2992–2995delAAGA [43].”
From Hereditary Breast Cancer and the BRCA1-Associated FANCJ/BACH1/BRIP1 (2011) · cites this paper as [43]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
Mutation and cancer: statistical study of retinoblastoma
Knudson, A. G. (1971) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.68.4.820 · Cited by 7,612 · see citing works
Ford, D., Easton, D., Stratton, M. R., Narod, S., Goldgar, D., Devilee, P., Bishop, D., Weber, B., Lenoir, G., Chang-Claude, J., et al. (1998) · American Journal of Human Genetics · doi:10.1086/301749 · Cited by 2,766 · see citing works
The risk of cancer associated with specific mutations of BRCA1 and BRCA2 among Ashkenazi Jews.
Struewing, J., Hartge, P., Wacholder, S., Baker, S. M., Berlin, M., McAdams, M., Timmerman, M. M., Brody, L., & Tucker, M. A. (1997) · New England Journal of Medicine · doi:10.1056/nejm199705153362001 · Cited by 2,399 · see citing works
The Nonsense-Mediated Decay RNA Surveillance Pathway
Chang, Y.-F., Imam, J. S., & Wilkinson, M. (2007) · Annual Review of Biochemistry · doi:10.1146/annurev.biochem.76.050106.093909 · Cited by 1,283 · see citing works
Nagy, E., & Maquat, L. E. (1998) · Trends in Biochemical Sciences · doi:10.1016/s0968-0004(98)01208-0 · Cited by 1,187 · see citing works
Biallelic Inactivation of <i>BRCA2</i> in Fanconi Anemia
Howlett, N. G., Taniguchi, T., Olson, S., Cox, B., Waisfisz, Q., de Die-Smulders, C., Persky, N., Grompe, M., Joenje, H., Pals, G., et al. (2002) · Science · doi:10.1126/science.1073834 · Cited by 1,149 · see citing works
The CHEK2-Breast Cancer Consortium (2002) · Nature Genetics · doi:10.1038/ng879 · Cited by 1,104 · see citing works
PALB2, which encodes a BRCA2-interacting protein, is a breast cancer susceptibility gene
Rahman, N., Seal, S., Thompson, D. J., Kelly, P. F., Renwick, A., Elliott, A., Reid, S., Spanova, K., Barfoot, R., Chagtai, T., et al. (2006) · Nature Genetics · doi:10.1038/ng1959 · Cited by 1,002 · see citing works
The BRCT Domain Is a Phospho-Protein Binding Domain
Yu, X., Chini, C. C. S., He, M., Mer, G., & Chen, J. (2003) · Science · doi:10.1126/science.1088753 · Cited by 862 · see citing works
The Breast Cancer Susceptibility Collaboration (UK), Seal, S., Thompson, D., Renwick, A., Elliott, A., Kelly, P., Barfoot, R., Chagtai, T., Jayatilake, H., Ahmed, M., et al. (2006) · Nature Genetics · doi:10.1038/ng1902 · Cited by 746 · see citing works
ATM mutations that cause ataxia-telangiectasia are breast cancer susceptibility alleles
Renwick, A., Thompson, D. J., Seal, S., Kelly, P. F., Chagtai, T., Ahmed, M., North, B. V., Jayatilake, H., Barfoot, R., Spanova, K., et al. (2006) · Nature Genetics · doi:10.1038/ng1837 · Cited by 743 · see citing works
RecQ helicases: caretakers of the genome
Hickson, I. D. (2003) · Nature reviews. Cancer · doi:10.1038/nrc1012 · Cited by 680 · see citing works
Cantor, S. B., Bell, D. W., Ganesan, S., Kass, E. M., Drapkin, R., Grossman, S., Wahrer, D. C. R., Sgroi, D. C., Lane, W. S., Haber, D. A., et al. (2001) · Cell · doi:10.1016/s0092-8674(01)00304-x · Cited by 674 · see citing works
Self-citationBiallelic mutations in PALB2 cause Fanconi anemia subtype FA-N and predispose to childhood cancer
Reid, S., Schindler, D., Hanenberg, H., Barker, K., Hanks, S., Kalb, R., Neveling, K., Kelly, P., Seal, S., Freund, M., et al. (2007) · Nature Genetics · doi:10.1038/ng1947 · Cited by 642 · see citing works
Anglian Breast Cancer Study Group (2000) · British Journal of Cancer · doi:10.1054/bjoc.2000.1407 · Cited by 602 · see citing works
Breast cancer risk associated with BRCA1 and BRCA2 in diverse populations
Fackenthal, J. D., & Olopade, O. I. (2007) · Nature reviews. Cancer · doi:10.1038/nrc2054 · Cited by 483 · see citing works
Ten Genes for Inherited Breast Cancer
Walsh, T., & King, M.-C. (2007) · Cancer Cell · doi:10.1016/j.ccr.2007.01.010 · Cited by 477 · see citing works
A recurrent mutation in PALB2 in Finnish cancer families
Erkko, H., Xia, B., Nikkilä, J., Schleutker, J., Syrjäkoski, K., Mannermaa, A., Kallioniemi, A. H., Pylkäs, K., Karppinen, S., Rapakko, K., et al. (2007) · Nature · doi:10.1038/nature05609 · Cited by 466 · see citing works
Self-citationFanconi anemia is associated with a defect in the BRCA2 partner PALB2
Xia, B., Dorsman, J. C., Ameziane, N., de Vries, Y., Rooimans, M. A., Sheng, Q., Pals, G., Errami, A., Gluckman, E., Llera, J., et al. (2007) · Nature Genetics · doi:10.1038/ng1942 · Cited by 465 · see citing works
The DNA helicase BRIP1 is defective in Fanconi anemia complementation group J
Levitus, M., Waisfisz, Q., Godthelp, B. C., Vries, Y. D., Hussain, S., Wiegant, W. W., Elghalbzouri-Maghrani, E., Steltenpool, J., Rooimans, M. A., Pals, G., et al. (2005) · Nature Genetics · doi:10.1038/ng1625 · Cited by 432 · see citing works
Litman, R., Peng, M., Jin, Z., Zhang, F., Zhang, J., Powell, S., Andreassen, P. R., & Cantor, S. B. (2005) · Cancer Cell · doi:10.1016/j.ccr.2005.08.004 · Cited by 396 · see citing works
Molecular pathogenesis of Fanconi anemia: recent progress
Taniguchi, T., & D’Andrea, A. D. (2006) · Blood · doi:10.1182/blood-2005-10-4240 · Cited by 387 · see citing works
The BRCA1-interacting helicase BRIP1 is deficient in Fanconi anemia
Levran, O., Attwooll, C., Henry, R. T., Milton, K. L., Neveling, K., Rio, P., Batish, S. D., Kalb, R., Velleuer, E., Barral, S., et al. (2005) · Nature Genetics · doi:10.1038/ng1624 · Cited by 370 · see citing works
Population-based study of risk of breast cancer in carriers of BRCA2 mutation
Thorlacius, S., Struewing, J. P., Hartage, P., Ólafsdóttir, G. H., Sigvaldason, H., Tryggvadóttír, L., Wacholder, S., Tulinius, H., & Eyfjord, J. E. (1998) · The Lancet · doi:10.1016/s0140-6736(98)03300-5 · Cited by 348 · see citing works
The genetics of breast cancer susceptibility.
Rahman, N., & Stratton, M. R. (1998) · Annual Review of Genetics · doi:10.1146/annurev.genet.32.1.95 · Cited by 324 · see citing works
Ubiquitination of p53 and p21 Is Differentially Affected by Ionizing and UV Radiation
Maki, C. G., & Howley, P. M. (1997) · Molecular and Cellular Biology · doi:10.1128/mcb.17.1.355 · Cited by 305 · see citing works
Models of genetic susceptibility to breast cancer
Antoniou, A. C., & Easton, D. F. (2006) · Oncogene · doi:10.1038/sj.onc.1209879 · Cited by 303 · see citing works
Antoniou, A. C., Pharoah, P. D. P., McMullan, G., Day, N. E., Ponder, B. A. J., & Easton, D. (2001) · Genetic Epidemiology · doi:10.1002/gepi.1014 · Cited by 289 · see citing works
Applying nonsense-mediated mRNA decay research to the clinic: progress and challenges
Kuzmiak, H., & Maquat, L. E. (2006) · Trends in Molecular Medicine · doi:10.1016/j.molmed.2006.05.005 · Cited by 255 · see citing works
DNA Helicases, Genomic Instability, and Human Genetic Disease
van Brabant, A. J., Stan, R., & Ellis, N. A. (2000) · Annual Review of Genomics and Human Genetics · doi:10.1146/annurev.genom.1.1.409 · Cited by 252 · see citing works
Perrin-Vidoz, L. (2002) · Human Molecular Genetics · doi:10.1093/hmg/11.23.2805 · Cited by 245 · see citing works
Clapperton, J. A., Manke, I. A., Lowery, D. M., Ho, T., Haire, L. F., Yaffe, M. B., & Smerdon, S. J. (2004) · Nature Structural & Molecular Biology · doi:10.1038/nsmb775 · Cited by 243 · see citing works
Cantor, S., Drapkin, R., Zhang, F., Lin, Y., Han, J., Pamidi, S., & Livingston, D. M. (2004) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0308717101 · Cited by 240 · see citing works
Self-citationStructural basis of phosphopeptide recognition by the BRCT domain of BRCA1
Williams, R. S., Lee, M. S., Hau, D. D., & Glover, J. N. M. (2004) · Nature Structural & Molecular Biology · doi:10.1038/nsmb776 · Cited by 230 · see citing works
Location of BRCA1 in Human Breast and Ovarian Cancer Cells
Scully, R., Ganesan, S., Brown, M. A., Caprio, J. A. D., Cannistra, S. A., Feunteun, J., Schnitt, S. J., & Livingston, D. M. (1996) · Science · doi:10.1126/science.272.5258.123 · Cited by 217 · see citing works
Bridge, W. L., Vandenberg, C. J., Franklin, R., & Hiom, K. J. (2005) · Nature Genetics · doi:10.1038/ng1627 · Cited by 208 · see citing works
RAD50 and NBS1 are breast cancer susceptibility genes associated with genomic instability
Heikkinen, K. (2005) · Carcinogenesis · doi:10.1093/carcin/bgi360 · Cited by 208 · see citing works
RecQ family helicases: roles in cancer and aging
Karow, J., Wu, L., & Hickson, I. D. (2000) · Current Opinion in Genetics & Development · doi:10.1016/s0959-437x(99)00039-8 · Cited by 192 · see citing works
The FANCJ/MutLα interaction is required for correction of the cross‐link response in FA‐J cells
Peng, M., Litman, R., Xie, J., Sharma, S., Brosh, R. M., & Cantor, S. B. (2007) · The EMBO Journal · doi:10.1038/sj.emboj.7601754 · Cited by 181 · see citing works
Structure of the BRCT Repeats of BRCA1 Bound to a BACH1 Phosphopeptide
Shiozaki, E. N., Gu, L., Yan, N., & Shi, Y. (2004) · Molecular Cell · doi:10.1016/s1097-2765(04)00238-2 · Cited by 174 · see citing works
García‐Closas, M., Egan, K. M., Newcomb, P. A., et al. (2006) · Human Genetics · doi:10.1007/s00439-006-0135-z · Cited by 170 · see citing works
Introns are cis Effectors of the Nonsense-Codon-Mediated Reduction in Nuclear mRNA Abundance
Cheng, J., Belgrader, P., Zhou, X., & Maquat, L. E. (1994) · Molecular and Cellular Biology · doi:10.1128/mcb.14.9.6317-6325.1994 · Cited by 159 · see citing works
DNA helicases in inherited human disorders
Ellis, N. A. (1997) · Current Opinion in Genetics & Development · doi:10.1016/s0959-437x(97)80149-9 · Cited by 136 · see citing works
Reid, S., Renwick, A., Seal, S., Baskcomb, L., Barfoot, R., Jayatilake, H., Pritchard‐Jones, K., Stratton, M. R., Ridolfi-Lüthy, A., & Rahman, N. (2005) · Journal of Medical Genetics · doi:10.1136/jmg.2004.022673 · Cited by 122 · see citing works
Sigurdson, A. J., Hauptmann, M., Chatterjee, N., Alexander, B. H., Doody, M. M., Rutter, J. L., & Struewing, J. P. (2004) · BMC Cancer · doi:10.1186/1471-2407-4-9 · Cited by 92 · see citing works
Downregulation of Fanconi Anemia Genes in Sporadic Head and Neck Squamous Cell Carcinoma
Wreesmann, V. B., Estilo, C. L., Eisele, D. W., Singh, B., & Wang, S. J. (2007) · ORL · doi:10.1159/000101542 · Cited by 67 · see citing works
Rutter, J. L., Smith, A. M., Dávila, M. R., Sigurdson, A. J., Giusti, R. M., Pineda, M. A., Doody, M. M., Tucker, M. A., Greene, M. H., Zhang, J., et al. (2003) · Human Mutation · doi:10.1002/humu.10238 · Cited by 55 · see citing works
BACH1 Ser919Pro variant and breast cancer risk
Vahteristo, P., Uusi-Rauva, K., Tamminen, A., Eerola, H., BLOMQVIST, C. P., & Nevanlinna, H. A. (2006) · BMC Cancer · doi:10.1186/1471-2407-6-19 · Cited by 35 · see citing works
Polygenic Inherited Predisposition to Breast CancerPreprint
Ponder, B. A. J., Antoniou, A. C., Dunning, A. M., Easton, D. F., & Pharoah, P. D. P. (2005) · Cold Spring Harbor Symposia on Quantitative Biology · doi:10.1101/sqb.2005.70.029 · Cited by 32 · see citing works
Luo, L., Lei, H., Du, Q., von Wachenfeldt, A., Kockum, I., Luthman, H., Vorechovsky, I., & Lindblom, A. (2002) · International Journal of Cancer · doi:10.1002/ijc.10214 · Cited by 28 · see citing works
No evidence of involvement of germline BACH1 mutations in Finnish breast and ovarian cancer families
Karppinen, S., Vuosku, J., Heikkinen, K., Allinen, M., & Winqvist, R. (2003) · European Journal of Cancer · doi:10.1016/s0959-8049(02)00498-7 · Cited by 28 · see citing works
Aretini, P., D'Andrea, E., Pasini, B., Viel, A., Costantini, R., Cortesi, L., Ricevuto, E., Agata, S., Bisegna, R., Boiocchi, M., et al. (2003) · Breast Cancer Research and Treatment · doi:10.1023/a:1025428807472 · Cited by 25 · see citing works
Self-citationSomatic mutations that contribute to breast cancer.
Callahan, R. D. (1998) · PubMed · Cited by 18 · see citing works
Flagged first, then by citations
Cited by
Sorted by citations
Hereditary Breast Cancer and the BRCA1-Associated FANCJ/BACH1/BRIP1
Cantor, S. B., & Guillemette, S. (2011) · Future Oncology · doi:10.2217/fon.10.191 · Cited by 106 · see citing works
“Along these lines, several FANCJ mutations targeting noncoding genomic DNA have been identified in both breast cancer and FA patients [28,43].”
InfluentialWu, Y., Sommers, J. A., Suhasini, A. N., Leonard, T., Deakyne, J. S., Mazin, A. V., Shin-ya, K., Kitao, H., & Brosh, R. M. (2010) · Blood · doi:10.1182/blood-2009-11-256016 · Cited by 72 · see citing works
Assessing the link between BACH1/FANCJ and MLH1 in DNA crosslink repair
Cantor, S. B., & Xie, J. (2010) · Environmental and Molecular Mutagenesis · doi:10.1002/em.20568 · Cited by 29 · see citing works
- Authors
- De Nicolo, A., Tancredi, M., Lombardi, G., Flemma, C. C., Barbuti, S., Di Cristofano, C., Sobhian, B., Bevilacqua, G., Drapkin, R., & Caligo, M. A.
- Affiliations
- 1Cancer Biology, and Departments of
- University of Pisa (IT)
- 4Division of Surgical, Molecular and Ultrastructural Pathology, Department of Oncology, Transplants and New Technologies in Medicine, Section of Oncogenetics, University of Pisa and University Hospital of Pisa, Pisa, Italy
- Brigham and Women's Hospital (US)
- Venue
- Clinical Cancer Research
- Published
- 2008-07-15
- Volume
- 14
- Issue
- 14
- Pages
- 4672-4680
- ISSN
- 1078-0432 (ISSN-L)
- 1557-3265
- PMC
- PMC2561321
- OpenAlex
- W2149943025
- Cited by
- 91
- References
- 53
- Citations by year
- 2026: 3 · 2025: 1 · 2023: 24 · 2022: 1 · 2021: 5 · 2020: 4 · 2019: 8 · 2018: 2 · 2017: 2 · 2016: 3 · 2015: 5 · 2014: 2 · 2013: 4 · 2012: 9
- FWCI
- 3.43
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Locations
- Clinical Cancer Research (publishedVersion)
- PubMed (publishedVersion)
- PubMed Central (acceptedVersion)
- CINECA IRIS Institutial research information system (University of Pisa) (submittedVersion)
- IRIS Research product catalog (Sapienza University of Rome) (submittedVersion)
- Funders
- Ovarian Cancer Research Fund (K08 CA108748)
- Associazione Italiana per la Ricerca sul Cancro
- National Cancer Institute (P50CA105009, K08CA108748)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › BRCA gene mutations in cancer
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › DNA Repair Mechanisms
- Health Sciences › Medicine › Pathology and Forensic Medicine › Genetic factors in colorectal cancer
- Keywords
- BRIP1, FANCJ, BACH1, germline mutations, breast cancer predisposition, protein stability, DNA helicase, frameshift mutation, premature stop codon, ovarian cancer, early-onset breast cancer, loss of heterozygosity
- MeSH terms
- Adult, Aged, Base Sequence, Breast Neoplasms, DNA Mutational Analysis, DNA-Binding Proteins, Female, Humans, Male, Middle Aged, Molecular Sequence Data, Mutation, Ovarian Neoplasms, Pedigree, Transfection, Blotting, Western, Germ-Line Mutation, Loss of Heterozygosity, Genetic Predisposition to Disease, Reverse Transcriptase Polymerase Chain Reaction, RNA Helicases, Immunoprecipitation, Fanconi Anemia Complementation Group Proteins
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review